BLASTX nr result

ID: Bupleurum21_contig00009735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009735
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|2...    92   7e-17
ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycin...    87   4e-15
ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...    87   4e-15
ref|XP_004136275.1| PREDICTED: pre-rRNA-processing protein TSR2 ...    82   1e-13

>ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 24/193 (12%)
 Frame = +3

Query: 39  LSEATLLKFREGIRLILSRWPSLRFAVEYECG----------LPVARFSPFMQG--PIYI 182
           L+  ++ +FREGIRLILS+W +L+ AVE E G          L    FS F Q   P+YI
Sbjct: 21  LTADSISQFREGIRLILSKWSALQLAVENEWGGRGSHLLAEQLASDIFSWFTQSKEPLYI 80

Query: 183 DDLEDMLGAFLLSLNTHLDNGINEEVSEKLMILYEECLEGNHA---RTVSTPPIMQAANK 353
           DDLE ++   +LSLNT +++G  EEV+EKLMI++EECLEGN++   +     P M A   
Sbjct: 81  DDLESIMDEAMLSLNTMIEDGSVEEVAEKLMIMHEECLEGNYSSIQKLRDEGPRMGAHQH 140

Query: 354 XXXXXXXXXXXXXXXXXXXXXESQHDM--------IQRNMMKVAELKLG-EPAEAEDGWT 506
                                +   +M        ++ N++     + G + A++EDGWT
Sbjct: 141 VKQAVEDDDDSEDSDSDDKMGDDGSNMMVDTPEFQLKTNLVNKPVNEPGAKEAQSEDGWT 200

Query: 507 VVSRNRRGQYRRN 545
           VVS +RR + +RN
Sbjct: 201 VVS-SRRNKGKRN 212


>ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|222838085|gb|EEE76450.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 72/195 (36%), Positives = 100/195 (51%), Gaps = 26/195 (13%)
 Frame = +3

Query: 39  LSEATLLKFREGIRLILSRWPSLRFAVEYECG----------LPVARFSPFMQG--PIYI 182
           L+  ++ +FREGI LILS+W +L+ AVE E G          L     S F Q   P++I
Sbjct: 22  LTADSISQFREGICLILSKWSALQLAVENEWGGRGSGLLAEQLASDILSWFTQSKEPLFI 81

Query: 183 DDLEDMLGAFLLSLNTHLDNGINEEVSEKLMILYEECLEGNHA----------RTVSTPP 332
           DDLE +L   +LSLNT +D+G  EEV+EKLMI++EECLEGN++          RT +   
Sbjct: 82  DDLEGILDEAMLSLNTMIDDGSIEEVAEKLMIMHEECLEGNYSSIQKLREAAPRTRAHQH 141

Query: 333 IMQAA----NKXXXXXXXXXXXXXXXXXXXXXESQHDMIQRNMMKVAELKLGEPAEAEDG 500
           + QA     +                      E Q  M   N  K   +   + A++EDG
Sbjct: 142 VKQAVDSDDDSEDSGNDDKMGDDESNMMVDAPEFQSKMYPVN--KPVNVPRAKEAQSEDG 199

Query: 501 WTVVSRNRRGQYRRN 545
           WTVVS +RR + +RN
Sbjct: 200 WTVVS-SRRNKDKRN 213


>ref|NP_001242113.1| uncharacterized protein LOC100795708 [Glycine max]
           gi|255641901|gb|ACU21219.1| unknown [Glycine max]
          Length = 201

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 64/188 (34%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
 Frame = +3

Query: 63  FREGIRLILSRWPSLRFAVEYECGLPVARFSPFM------------QGPIYIDDLEDMLG 206
           F EGI L+LSRW +LR AVE E G   +R                 + P+YIDDLED+L 
Sbjct: 15  FNEGICLVLSRWSALRSAVENEWGGRESRLKADQLASGILNWFTRSKEPLYIDDLEDILD 74

Query: 207 AFLLSLNTHLDNGINEEVSEKLMILYEECLEGN----------HARTVSTPPIMQAANKX 356
             +LSLN  +++G  EEV+EKLM+++EE LEGN          +    + P + Q AN+ 
Sbjct: 75  QGMLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLEQATLPHVTQIANED 134

Query: 357 XXXXXXXXXXXXXXXXXXXXESQHDMIQRNMMKVAELKLGEP-----AEAEDGWTVVSRN 521
                                +       + M      + EP      EA+DGW VVS N
Sbjct: 135 DTDEDGDDDEKMIVDDNSSKMNLDISTSDSNMNSVNRPVNEPLPKVSGEADDGWVVVS-N 193

Query: 522 RRGQYRRN 545
           RR + R+N
Sbjct: 194 RRNKGRKN 201


>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 68/188 (36%), Positives = 99/188 (52%), Gaps = 27/188 (14%)
 Frame = +3

Query: 63  FREGIRLILSRWPSLRFAVEYECGLPVAR----------FSPFMQG--PIYIDDLEDMLG 206
           F+EGI LILSRW +L+ AVE E G   +R          FS F Q   P+YIDDLE++L 
Sbjct: 27  FQEGIFLILSRWSALQLAVENEWGGRGSRQLADQIGFDIFSWFTQSKEPLYIDDLENILD 86

Query: 207 AFLLSLNTHLDNGINEEVSEKLMILYEECLEGNH--------ARTVS--TPPIMQAANKX 356
             ++SLNT +++G  EEV+EKLMI++EECLEGN+        AR  +     I QAAN  
Sbjct: 87  EGMISLNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLRQARPTAGVHQHIRQAANGD 146

Query: 357 XXXXXXXXXXXXXXXXXXXXESQHDMIQ-RNMMKVAELKLGEP----AEAEDGWTVVSRN 521
                                   D  + ++     ++++ EP    A+ ED WTV+S +
Sbjct: 147 DDEDDDSSDDDDNSMGDNRSNMMMDAPKFQSKPNEVDMQVNEPSCQEAQVEDEWTVIS-S 205

Query: 522 RRGQYRRN 545
           ++ + +RN
Sbjct: 206 KKNRGKRN 213


>ref|XP_004136275.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Cucumis
           sativus] gi|449496991|ref|XP_004160283.1| PREDICTED:
           pre-rRNA-processing protein TSR2 homolog [Cucumis
           sativus]
          Length = 193

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 63/174 (36%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
 Frame = +3

Query: 63  FREGIRLILSRWPSLRFAVEYECGLPVAR----------FSPFMQGP--IYIDDLEDMLG 206
           F+EGI L+LSRW +L+ AVE E G   +R          F+ F Q    +YIDDLE +L 
Sbjct: 17  FQEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCAEIFTWFTQNKEQLYIDDLEIILD 76

Query: 207 AFLLSLNTHLDNGINEEVSEKLMILYEECLEGNHA---RTVSTPPIMQAANKXXXXXXXX 377
             +LSL+T +D+G  EEV+EKL+I++EEC++GN +   R   +P    A           
Sbjct: 77  EAMLSLSTQVDDGSIEEVAEKLIIMHEECVDGNFSSIERLRQSPRPQVAHAHVNQAESDD 136

Query: 378 XXXXXXXXXXXXXESQHDMIQRNMMKVAELKLG--EPAEAEDGWT-VVSRNRRG 530
                        +   D +Q    + A  +L     AEAEDGW  V SR  RG
Sbjct: 137 DDDDDVEEDVNRNDMMVDAVQPAQSRPANPQLNPEATAEAEDGWVQVTSRRNRG 190


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