BLASTX nr result

ID: Bupleurum21_contig00009724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009724
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273806.2| PREDICTED: FHA domain-containing protein DDL...    73   2e-11
emb|CBI28945.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CAN76236.1| hypothetical protein VITISV_018562 [Vitis vinifera]    73   2e-11
ref|XP_004151950.1| PREDICTED: FHA domain-containing protein DDL...    68   7e-10

>ref|XP_002273806.2| PREDICTED: FHA domain-containing protein DDL-like [Vitis vinifera]
          Length = 368

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
 Frame = +3

Query: 6   KSRSPVSRSPVKDKPFSQTRSSRHVESSH---SAVRDKPSGRVKSPSRPRSNSPVQHRSS 176
           +S+S   RSP + +   +++S     SSH   S  R+K S R +SP    SNSP+  RS 
Sbjct: 22  RSQSRKERSPGRRRSSQRSKSPAKNSSSHRTRSPDREKRSSRARSPRHAESNSPLP-RSP 80

Query: 177 RERANXXXXXXXXXXXXXXXXXXXXXXXXLRRAKYENEAEIASER-MQKTNHRGSERSAH 353
             R                          L+RA+ E E E  +E+  +K   +  ER+ H
Sbjct: 81  SPRTKR-----------------------LKRAQAEREVEKVTEKEYEKNGSKDRERARH 117

Query: 354 MEKELESGEPSLRKDKKSGRDIGNGS---SRSKRERSTSPSDHHHVNRHRSRS 503
            EK  E   P  + +++S +D  +G    SR +RERS SP+ HHH  RH S S
Sbjct: 118 REKSSEREVPREKAERRSEKDNASGEFSRSRRERERSVSPTIHHHRGRHSSHS 170


>emb|CBI28945.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
 Frame = +3

Query: 6   KSRSPVSRSPVKDKPFSQTRSSRHVESSH---SAVRDKPSGRVKSPSRPRSNSPVQHRSS 176
           +S+S   RSP + +   +++S     SSH   S  R+K S R +SP    SNSP+  RS 
Sbjct: 37  RSQSRKERSPGRRRSSQRSKSPAKNSSSHRTRSPDREKRSSRARSPRHAESNSPLP-RSP 95

Query: 177 RERANXXXXXXXXXXXXXXXXXXXXXXXXLRRAKYENEAEIASER-MQKTNHRGSERSAH 353
             R                          L+RA+ E E E  +E+  +K   +  ER+ H
Sbjct: 96  SPRTKR-----------------------LKRAQAEREVEKVTEKEYEKNGSKDRERARH 132

Query: 354 MEKELESGEPSLRKDKKSGRDIGNGS---SRSKRERSTSPSDHHHVNRHRSRS 503
            EK  E   P  + +++S +D  +G    SR +RERS SP+ HHH  RH S S
Sbjct: 133 REKSSEREVPREKAERRSEKDNASGEFSRSRRERERSVSPTIHHHRGRHSSHS 185


>emb|CAN76236.1| hypothetical protein VITISV_018562 [Vitis vinifera]
          Length = 470

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 7/173 (4%)
 Frame = +3

Query: 6   KSRSPVSRSPVKDKPFSQTRSSRHVESSH---SAVRDKPSGRVKSPSRPRSNSPVQHRSS 176
           +S+S   RSP + +   +++S     SSH   S  R+K S R +SP    SNSP+  RS 
Sbjct: 22  RSQSRKERSPGRRRSSQRSKSPAKNSSSHRTRSPDREKRSSRARSPRHAESNSPLP-RSP 80

Query: 177 RERANXXXXXXXXXXXXXXXXXXXXXXXXLRRAKYENEAEIASER-MQKTNHRGSERSAH 353
             R                          L+RA+ E E E  +E+  +K   +  ER+ H
Sbjct: 81  SPRTKR-----------------------LKRAQAEREVEKVTEKEYEKNGSKDRERARH 117

Query: 354 MEKELESGEPSLRKDKKSGRDIGNGS---SRSKRERSTSPSDHHHVNRHRSRS 503
            EK  E   P  + +++S +D  +G    SR +RERS SP+ HHH  RH S S
Sbjct: 118 REKSSEREVPREKAERRSEKDNASGEFSRSRRERERSVSPTIHHHRGRHSSHS 170


>ref|XP_004151950.1| PREDICTED: FHA domain-containing protein DDL-like [Cucumis sativus]
           gi|449489984|ref|XP_004158476.1| PREDICTED: FHA
           domain-containing protein DDL-like [Cucumis sativus]
          Length = 353

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 59/172 (34%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
 Frame = +3

Query: 3   AKSRSPVSRSPVKDKPFSQTRSSRHVESSH---SAVRDKPSGRVKSPSRPRSNSPVQHRS 173
           ++S   V RS  +  P  + RS    +SSH   S  RDK S R +SP   RS+SP + RS
Sbjct: 9   SESLGRVRRSSPRRSPSRRGRSPTRHKSSHNGSSPARDKHSSRARSPKHGRSSSP-RTRS 67

Query: 174 SRERANXXXXXXXXXXXXXXXXXXXXXXXXLRRAKYENEAEIASERMQKTNH-RGSERSA 350
              R                          LRRA  E   E +S+R  + N  RGS++ A
Sbjct: 68  PSPRTKR-----------------------LRRAA-EKAPEKSSDRDHERNRGRGSDKEA 103

Query: 351 HMEKELESGEPSLRKDKKSGRDIGNG-SSRSKRERSTSPSDHHHVNRHRSRS 503
           H E+  +      RK++ S ++  +G SSRS+   S+SPS+ H  NRHRS S
Sbjct: 104 HQERVSDRELGGERKERSSRQEAKDGKSSRSRHGNSSSPSERHQRNRHRSPS 155


Top