BLASTX nr result

ID: Bupleurum21_contig00009711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009711
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-...   204   8e-51
ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-...   204   8e-51
emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera]   204   8e-51
emb|CBI21151.3| unnamed protein product [Vitis vinifera]              203   2e-50
ref|XP_002534061.1| Eukaryotic initiation factor iso-4F subunit ...   202   4e-50

>ref|XP_003633181.1| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
            isoform 2 [Vitis vinifera]
          Length = 795

 Score =  204 bits (519), Expect = 8e-51
 Identities = 108/197 (54%), Positives = 138/197 (70%), Gaps = 20/197 (10%)
 Frame = +1

Query: 19   GKSVPPNARYLPQG--GSATGGSNALMQGNXXXXXXXXXXXXXXXXXXXNQISS------ 174
            GKS+P N+R LPQG  G  +G ++AL+QG+                   + + +      
Sbjct: 551  GKSMPLNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVA 610

Query: 175  ------------AGRLSPEALKKKTTSLLEEYFNVRMLDEALQCVEELNSPSYHPEFVKE 318
                        A RL+ + L++KT SLLEEYF VR+LDEALQCVEEL SP+YHPE VKE
Sbjct: 611  SIVPAAEKPVTPAARLNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKE 670

Query: 319  SIALALEKSPPCLEPVAKLLEYLYAKKVLTSADIQTGCLLYGSNLDDIGIDLPKAPNNFG 498
            +I+LALEKSPPC++PVAKLLE+L++KKVLT+ DI TGCL+YGS LDDIGIDLPKAPN+FG
Sbjct: 671  AISLALEKSPPCVDPVAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFG 730

Query: 499  EIMGKLILFGELNFKVV 549
            E++G L+L G L+FKVV
Sbjct: 731  EVIGNLVLAGALDFKVV 747


>ref|XP_002277218.2| PREDICTED: eukaryotic initiation factor iso-4F subunit p82-34-like
            isoform 1 [Vitis vinifera]
          Length = 794

 Score =  204 bits (519), Expect = 8e-51
 Identities = 108/197 (54%), Positives = 138/197 (70%), Gaps = 20/197 (10%)
 Frame = +1

Query: 19   GKSVPPNARYLPQG--GSATGGSNALMQGNXXXXXXXXXXXXXXXXXXXNQISS------ 174
            GKS+P N+R LPQG  G  +G ++AL+QG+                   + + +      
Sbjct: 550  GKSMPLNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVA 609

Query: 175  ------------AGRLSPEALKKKTTSLLEEYFNVRMLDEALQCVEELNSPSYHPEFVKE 318
                        A RL+ + L++KT SLLEEYF VR+LDEALQCVEEL SP+YHPE VKE
Sbjct: 610  SIVPAAEKPVTPAARLNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKE 669

Query: 319  SIALALEKSPPCLEPVAKLLEYLYAKKVLTSADIQTGCLLYGSNLDDIGIDLPKAPNNFG 498
            +I+LALEKSPPC++PVAKLLE+L++KKVLT+ DI TGCL+YGS LDDIGIDLPKAPN+FG
Sbjct: 670  AISLALEKSPPCVDPVAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFG 729

Query: 499  EIMGKLILFGELNFKVV 549
            E++G L+L G L+FKVV
Sbjct: 730  EVIGNLVLAGALDFKVV 746


>emb|CAN70546.1| hypothetical protein VITISV_013807 [Vitis vinifera]
          Length = 794

 Score =  204 bits (519), Expect = 8e-51
 Identities = 108/197 (54%), Positives = 138/197 (70%), Gaps = 20/197 (10%)
 Frame = +1

Query: 19   GKSVPPNARYLPQG--GSATGGSNALMQGNXXXXXXXXXXXXXXXXXXXNQISS------ 174
            GKS+P N+R LPQG  G  +G ++AL+QG+                   + + +      
Sbjct: 550  GKSMPLNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVA 609

Query: 175  ------------AGRLSPEALKKKTTSLLEEYFNVRMLDEALQCVEELNSPSYHPEFVKE 318
                        A RL+ + L++KT SLLEEYF VR+LDEALQCVEEL SP+YHPE VKE
Sbjct: 610  SIVPAAEKPVTPAARLNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKE 669

Query: 319  SIALALEKSPPCLEPVAKLLEYLYAKKVLTSADIQTGCLLYGSNLDDIGIDLPKAPNNFG 498
            +I+LALEKSPPC++PVAKLLE+L++KKVLT+ DI TGCL+YGS LDDIGIDLPKAPN+FG
Sbjct: 670  AISLALEKSPPCVDPVAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFG 729

Query: 499  EIMGKLILFGELNFKVV 549
            E++G L+L G L+FKVV
Sbjct: 730  EVIGNLVLAGALDFKVV 746


>emb|CBI21151.3| unnamed protein product [Vitis vinifera]
          Length = 836

 Score =  203 bits (516), Expect = 2e-50
 Identities = 108/186 (58%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
 Frame = +1

Query: 1    SMPRNDGKSVPPNARYLPQG--GSATGGSNALMQGNXXXXXXXXXXXXXXXXXXXNQISS 174
            SMPR DG   P N++ LPQG  G  +G ++AL+QG                       ++
Sbjct: 619  SMPRADG---PINSKLLPQGSGGFISGKTSALLQGTPVRTPEKPQ-------------AA 662

Query: 175  AGRLSPEALKKKTTSLLEEYFNVRMLDEALQCVEELNSPSYHPEFVKESIALALEKSPPC 354
            A R +P  L++KT SLLEEYF+VR+LDEALQCVEEL SP+YHPE VKE+++LALEKSPPC
Sbjct: 663  APRSNPVDLRRKTVSLLEEYFSVRILDEALQCVEELKSPAYHPEVVKEAVSLALEKSPPC 722

Query: 355  LEPVAKLLEYLYAKKVLTSADIQTGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILFGEL 534
            +EPV KLL YL+ K VL + D+ TGCLLYGS LDD+GIDLPKAPNNFGE++GKL+L G L
Sbjct: 723  VEPVIKLLVYLFNKNVLLARDLGTGCLLYGSLLDDVGIDLPKAPNNFGEVLGKLVLAGGL 782

Query: 535  NFKVVE 552
            +FKVV+
Sbjct: 783  DFKVVK 788


>ref|XP_002534061.1| Eukaryotic initiation factor iso-4F subunit p82-34, putative
           [Ricinus communis] gi|223525907|gb|EEF28321.1|
           Eukaryotic initiation factor iso-4F subunit p82-34,
           putative [Ricinus communis]
          Length = 587

 Score =  202 bits (513), Expect = 4e-50
 Identities = 113/218 (51%), Positives = 137/218 (62%), Gaps = 35/218 (16%)
 Frame = +1

Query: 1   SMPRNDGKSVPP---------------NARYLPQG--GSATGGSNALMQGNXXXXXXXXX 129
           SMPR DG ++ P               N R LPQG  G  +G S+AL+QG+         
Sbjct: 322 SMPRGDGSTMQPTGRVPSPMFNKSSSVNTRLLPQGSGGFMSGKSSALLQGSGGPSPRPCN 381

Query: 130 XXXXXXXXXX------------------NQISSAGRLSPEALKKKTTSLLEEYFNVRMLD 255
                                         ++SA   +P  L++KT SLL+EYF+VR+LD
Sbjct: 382 ISLGTEPPAQAPAPRKIVPTPHMPPAVEKPVASAASFNPNELRRKTISLLKEYFSVRLLD 441

Query: 256 EALQCVEELNSPSYHPEFVKESIALALEKSPPCLEPVAKLLEYLYAKKVLTSADIQTGCL 435
           EALQCVEELNSP YHPE VKE I L LE++PPC+EPVAKLLEYL++KKVLT+ DI TGCL
Sbjct: 442 EALQCVEELNSPVYHPEIVKEVICLGLEENPPCVEPVAKLLEYLFSKKVLTAKDIGTGCL 501

Query: 436 LYGSNLDDIGIDLPKAPNNFGEIMGKLILFGELNFKVV 549
           LYGS LDDIGIDLPKAPNNFGEI+G L+L G ++FKVV
Sbjct: 502 LYGSMLDDIGIDLPKAPNNFGEIIGLLVLAGGMDFKVV 539


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