BLASTX nr result
ID: Bupleurum21_contig00009699
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00009699
(1438 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|33200777... 234 3e-59
ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana] gi|75328911... 232 2e-58
ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495... 232 2e-58
gb|AAM61481.1| unknown [Arabidopsis thaliana] 231 4e-58
ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arab... 223 1e-55
>ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana] gi|332007778|gb|AED95161.1|
protein OSB3 [Arabidopsis thaliana]
Length = 442
Score = 234 bits (598), Expect = 3e-59
Identities = 146/380 (38%), Positives = 208/380 (54%), Gaps = 24/380 (6%)
Frame = +3
Query: 171 PAEIPFQKKVSNLVKLIGCVKAPVEFKVLQDGKCCATTVIAQENKG-SVSLRIPLIFEGD 347
P +I ++ ++SN + LIG V+ PV+F DGK A TVI+Q + S + IP+IFEGD
Sbjct: 71 PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 348 LANIAAYHLKEEDCVYIDGQLSTDPSPFTLKSEQSNLKVMVHNVNFVEGSPWKKNTRDRK 527
LA IA H+K+ED +++ G+L D P + QSN++VMV N+NFV+ + T K
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAA-----TSTTK 185
Query: 528 IVVPLESLKSDDTCQKKESRDDAYQRTESVKDSTIQKVESTVEFKILDQSVLDLITDPDE 707
+ P E K + +KK +R ++ + + + T S LI +P E
Sbjct: 186 TISPPE--KEVTSIKKKPARS---KKVKVIDEET-------------SNSWKHLIENPKE 227
Query: 708 WYDIRSKEVN----LASPAFEHKVDGRLVHINDSTPDWIRKELECLTFDRQIKKKSSKAN 875
W D R + N P F+ KV G + ++ + PDW +LE L FD + K + K N
Sbjct: 228 WLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPKGNIKLN 286
Query: 876 MTNSGDVISSSWRDLLKNPKQWRDHRENKLRGLAKPKYPDFKNKESGASLWLDSAPDWVL 1055
D+ SW+DL++NP +W D+R +K KYPDFK+KE+G +LW+ ++P WVL
Sbjct: 287 QLK--DIGEESWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWMTNSPIWVL 340
Query: 1056 ---PGLKG-------------LEFDVPIQKGKKAD---ENSWTDLVENPEKWWDNRSNKK 1178
P LK LE DV + KG E W +LVENP KWWDNR +K+
Sbjct: 341 SKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKR 400
Query: 1179 NPKSPDFKHKDLGTALWLSD 1238
NPK PDFKHK+ G ALW+ D
Sbjct: 401 NPKGPDFKHKETGEALWIGD 420
>ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein
OSB3, chloroplastic/mitochondrial; AltName:
Full=Organellar single-stranded DNA-binding protein 3;
Flags: Precursor gi|26452626|dbj|BAC43396.1| unknown
protein [Arabidopsis thaliana] gi|28973013|gb|AAO63831.1|
unknown protein [Arabidopsis thaliana]
gi|30102734|gb|AAP21285.1| At5g44785 [Arabidopsis
thaliana] gi|110743279|dbj|BAE99530.1| hypothetical
protein [Arabidopsis thaliana]
gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis
thaliana]
Length = 440
Score = 232 bits (591), Expect = 2e-58
Identities = 145/380 (38%), Positives = 207/380 (54%), Gaps = 24/380 (6%)
Frame = +3
Query: 171 PAEIPFQKKVSNLVKLIGCVKAPVEFKVLQDGKCCATTVIAQENKG-SVSLRIPLIFEGD 347
P +I ++ ++SN + LIG V+ PV+F DGK A TVI+Q + S + IP+IFEGD
Sbjct: 71 PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 348 LANIAAYHLKEEDCVYIDGQLSTDPSPFTLKSEQSNLKVMVHNVNFVEGSPWKKNTRDRK 527
LA IA H+K+ED +++ G+L D P + QSN++VMV N+NFV+ + T K
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAA-----TSTTK 185
Query: 528 IVVPLESLKSDDTCQKKESRDDAYQRTESVKDSTIQKVESTVEFKILDQSVLDLITDPDE 707
+ P E K + +KK +R ++ + + + T S LI +P E
Sbjct: 186 TISPPE--KEVTSIKKKPARS---KKVKVIDEET-------------SNSWKHLIENPKE 227
Query: 708 WYDIRSKEVN----LASPAFEHKVDGRLVHINDSTPDWIRKELECLTFDRQIKKKSSKAN 875
W D R + N P F+ KV G + ++ + PDW +LE L FD + K + K N
Sbjct: 228 WLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPKGNIKLN 286
Query: 876 MTNSGDVISSSWRDLLKNPKQWRDHRENKLRGLAKPKYPDFKNKESGASLWLDSAPDWVL 1055
+ SW+DL++NP +W D+R +K KYPDFK+KE+G +LW+ ++P WVL
Sbjct: 287 QLKGEE----SWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWMTNSPIWVL 338
Query: 1056 ---PGLKG-------------LEFDVPIQKGKKAD---ENSWTDLVENPEKWWDNRSNKK 1178
P LK LE DV + KG E W +LVENP KWWDNR +K+
Sbjct: 339 SKLPPLKKNQERPFMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKR 398
Query: 1179 NPKSPDFKHKDLGTALWLSD 1238
NPK PDFKHK+ G ALW+ D
Sbjct: 399 NPKGPDFKHKETGEALWIGD 418
>ref|XP_003620948.1| Protein OSB3 [Medicago truncatula] gi|355495963|gb|AES77166.1|
Protein OSB3 [Medicago truncatula]
Length = 491
Score = 232 bits (591), Expect = 2e-58
Identities = 147/374 (39%), Positives = 190/374 (50%), Gaps = 6/374 (1%)
Frame = +3
Query: 135 TEGKDSAVDCPRPAEIPFQKKVSNLVKLIGCVKAPVEFKVLQDGKCCATTVIAQENKGSV 314
T K S +P EIPFQ K++N V LIG V P+ F+ DG A TVI +
Sbjct: 56 TTRKSSKSKLQKPTEIPFQPKLANSVNLIGTVNKPIHFQTSTDGNPSAATVITRLGHDPS 115
Query: 315 SLRIPLIFEGDLANIAAYHLKEEDCVYIDGQLSTDPSPFTL-KSEQSNLKVMVHNVNFVE 491
IPL+F GDLA A +HLK D V+++GQLST+ L K +Q +V V ++NFVE
Sbjct: 116 QFLIPLVFHGDLALTAQFHLKLNDVVHVEGQLSTEDDQIKLDKPQQYQFQVKVQSLNFVE 175
Query: 492 GSPWKKNTRDRKIVVPLESLKSDDTCQKKESRDDAYQRTESVKDSTIQKVESTVEFKILD 671
G P K L S + D + ES +D + +E KD +K E K
Sbjct: 176 GYPRVKK-------ASLTSKEKSDI--EDESENDEIKSSE--KDIHSEKTEQHDTRK--- 221
Query: 672 QSVLDLITDPDEWYDIRSKEVNLASPAFEHKVDGRLVHINDSTPDWIRKELECLTFDRQI 851
S D+I P +W + S + + + FE K +G L Q
Sbjct: 222 -SWRDVINKPSQWKAVHSPKESPKNADFESKTEGEL----------------------QP 258
Query: 852 KKKSSKANMTNSGDVISSSWRDLLKNPKQWRDHRENKLRGLAKPKYPDFKNKESGASLWL 1031
K S + +SS+W DLL +PK+W D R++K G PKYPDFK K+ S+WL
Sbjct: 259 GLKQSTTSAKKYTGSLSSTWGDLLDDPKKWWDFRDSKRNGSVNPKYPDFKRKDGNVSIWL 318
Query: 1032 DSAPDWVLPGLKGLEFDVPIQKGK-----KADENSWTDLVENPEKWWDNRSNKKNPKSPD 1196
D A VL LK LEFD P K K K DE SW DL++NP KWWDNR +KK ++PD
Sbjct: 319 DKASKSVLSRLKELEFDTPPVKPKQTKDSKGDE-SWNDLLQNPAKWWDNRVDKKYARAPD 377
Query: 1197 FKHKDLGTALWLSD 1238
FKHKD G LWL D
Sbjct: 378 FKHKDTGVGLWLRD 391
Score = 95.1 bits (235), Expect = 4e-17
Identities = 53/152 (34%), Positives = 83/152 (54%)
Frame = +3
Query: 669 DQSVLDLITDPDEWYDIRSKEVNLASPAFEHKVDGRLVHINDSTPDWIRKELECLTFDRQ 848
D+S DL+ +P +W+D R + +P F+HK G + + DS P W+ L+ L +
Sbjct: 350 DESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWLRDS-PSWVSSRLKEL----E 404
Query: 849 IKKKSSKANMTNSGDVISSSWRDLLKNPKQWRDHRENKLRGLAKPKYPDFKNKESGASLW 1028
++ S K+ SW DLL+NP +W D+R +K PK PDFK+K++G +LW
Sbjct: 405 VESTSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDK----KNPKGPDFKHKDTGEALW 460
Query: 1029 LDSAPDWVLPGLKGLEFDVPIQKGKKADENSW 1124
L +P WVLP L P++ +++ E SW
Sbjct: 461 LRGSPSWVLPKLP------PLKPKQQSAETSW 486
>gb|AAM61481.1| unknown [Arabidopsis thaliana]
Length = 440
Score = 231 bits (589), Expect = 4e-58
Identities = 145/380 (38%), Positives = 206/380 (54%), Gaps = 24/380 (6%)
Frame = +3
Query: 171 PAEIPFQKKVSNLVKLIGCVKAPVEFKVLQDGKCCATTVIAQENKG-SVSLRIPLIFEGD 347
P I ++ ++SN + LIG V+ PV+F DGK A TVI+Q + S + IP+IFEGD
Sbjct: 71 PKTIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 348 LANIAAYHLKEEDCVYIDGQLSTDPSPFTLKSEQSNLKVMVHNVNFVEGSPWKKNTRDRK 527
LA IA H+K+ED +++ G+L D P + QSN++VMV N+NFV+ + T K
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAA-----TSTTK 185
Query: 528 IVVPLESLKSDDTCQKKESRDDAYQRTESVKDSTIQKVESTVEFKILDQSVLDLITDPDE 707
+ P E K + +KK +R ++ + + + T S LI +P E
Sbjct: 186 TISPPE--KEVTSIKKKPARS---KKVKVIDEET-------------SNSWKHLIENPKE 227
Query: 708 WYDIRSKEVN----LASPAFEHKVDGRLVHINDSTPDWIRKELECLTFDRQIKKKSSKAN 875
W D R + N P F+ KV G + ++ + PDW +LE L FD + K + K N
Sbjct: 228 WLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS-TAPDWALLKLEELKFDVLVPKGNIKLN 286
Query: 876 MTNSGDVISSSWRDLLKNPKQWRDHRENKLRGLAKPKYPDFKNKESGASLWLDSAPDWVL 1055
+ SW+DL++NP +W D+R +K KYPDFK+KE+G +LW+ ++P WVL
Sbjct: 287 QLKGEE----SWKDLVQNPDKWLDNRSDK----TNVKYPDFKHKETGEALWMTNSPIWVL 338
Query: 1056 ---PGLKG-------------LEFDVPIQKGKKAD---ENSWTDLVENPEKWWDNRSNKK 1178
P LK LE DV + KG E W +LVENP KWWDNR +K+
Sbjct: 339 SKLPPLKKNQERPLMSNKVSQLELDVEVPKGNLKQLKREEIWKNLVENPSKWWDNRLDKR 398
Query: 1179 NPKSPDFKHKDLGTALWLSD 1238
NPK PDFKHK+ G ALW+ D
Sbjct: 399 NPKGPDFKHKETGEALWIGD 418
>ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata] gi|297309381|gb|EFH39805.1| hypothetical protein
ARALYDRAFT_494502 [Arabidopsis lyrata subsp. lyrata]
Length = 441
Score = 223 bits (568), Expect = 1e-55
Identities = 140/380 (36%), Positives = 202/380 (53%), Gaps = 24/380 (6%)
Frame = +3
Query: 171 PAEIPFQKKVSNLVKLIGCVKAPVEFKVLQDGKCCATTVIAQENKG-SVSLRIPLIFEGD 347
P I ++ ++SN + LIG V+ PV+F DGK A TVI+Q + S + IP+IFEGD
Sbjct: 71 PKRIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 348 LANIAAYHLKEEDCVYIDGQLSTDPSPFTLKSEQSNLKVMVHNVNFVEGSPWKKNTRDRK 527
LA IA H+K+ED +++ G+L D P + QSN++VMV N+NFV+ + T K
Sbjct: 131 LAQIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAA-----TSLTK 185
Query: 528 IVVPLESLKSDDTCQKKESRDDAYQRTESVKDSTIQKVESTVEFKILDQSVLDLITDPDE 707
+ P E + S K ++ + V + S LI +P E
Sbjct: 186 TISPPE------------------KEVISTKKRPVRSKKVKVIDEETSNSWKHLIENPKE 227
Query: 708 WYDIRSKEVN----LASPAFEHKVDGRLVHINDSTPDWIRKELECLTFDRQIKKKSSKAN 875
W D R + N P F+ KV G + ++ + PDW +L+ L FD + K + K N
Sbjct: 228 WLDHRGNKANGLVKPGHPDFKMKVGGLSLWLS-TAPDWALPKLKELEFDVLVPKGNIKLN 286
Query: 876 MTNSGDVISSSWRDLLKNPKQWRDHRENKLRGLAKPKYPDFKNKESGASLWLDSAPDWVL 1055
+ SW+DL++NP +W D+R +K KYPDFK+KE+G +LW+ ++P WVL
Sbjct: 287 QLKGEE----SWKDLVQNPDKWLDNRLDK----TNVKYPDFKHKETGEALWMTNSPIWVL 338
Query: 1056 ---PGLKG-------------LEFDVPIQKGKKAD---ENSWTDLVENPEKWWDNRSNKK 1178
P LK LE DV + G E SW +LVENP KWWDNR +K+
Sbjct: 339 SKLPPLKKNQERPLMSNTVPQLELDVVVPNGNLTQLKREESWKNLVENPSKWWDNRLDKR 398
Query: 1179 NPKSPDFKHKDLGTALWLSD 1238
NPK+PDFKHK+ G LW+++
Sbjct: 399 NPKAPDFKHKETGEVLWINN 418