BLASTX nr result

ID: Bupleurum21_contig00009695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009695
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
emb|CBI20254.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27

>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/93 (69%), Positives = 82/93 (88%)
 Frame = -3

Query: 279 INMTRDYSIAPQIEHYGCMVDLLCKAGLLEDALELIESMTMKPNAIIWGAVLGGSKLYKN 100
           ++M+RD+SI P+IEHYGCMVDLL KAGLLEDALEL+ SM M+PN++IWGA+LGG KL++N
Sbjct: 298 LSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRN 357

Query: 99  SDIAQTAVNKLMVLEPHNSGYYSLLVSMYADAN 1
             IAQ AVN+  VLEP+NSGYY+LLV+MYA+ N
Sbjct: 358 LKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVN 390


>emb|CBI20254.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/93 (69%), Positives = 82/93 (88%)
 Frame = -3

Query: 279 INMTRDYSIAPQIEHYGCMVDLLCKAGLLEDALELIESMTMKPNAIIWGAVLGGSKLYKN 100
           ++M+RD+SI P+IEHYGCMVDLL KAGLLEDALEL+ SM M+PN++IWGA+LGG KL++N
Sbjct: 328 LSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRN 387

Query: 99  SDIAQTAVNKLMVLEPHNSGYYSLLVSMYADAN 1
             IAQ AVN+  VLEP+NSGYY+LLV+MYA+ N
Sbjct: 388 LKIAQVAVNESKVLEPNNSGYYTLLVNMYAEVN 420


>ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Glycine max]
          Length = 529

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/93 (68%), Positives = 79/93 (84%)
 Frame = -3

Query: 279 INMTRDYSIAPQIEHYGCMVDLLCKAGLLEDALELIESMTMKPNAIIWGAVLGGSKLYKN 100
           ++M +DY IAPQ+EHYGCMVDLL KAGLLEDALE+I +MT++PN+ IWGA+L G KL+KN
Sbjct: 364 MSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKN 423

Query: 99  SDIAQTAVNKLMVLEPHNSGYYSLLVSMYADAN 1
            +IA  AV  LMVLEP NSG+YSLLV+MYA+ N
Sbjct: 424 LEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEEN 456


>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/92 (68%), Positives = 79/92 (85%)
 Frame = -3

Query: 276 NMTRDYSIAPQIEHYGCMVDLLCKAGLLEDALELIESMTMKPNAIIWGAVLGGSKLYKNS 97
           +MTRD+SI P +EHYGCMVDLL KAGLLE+AL+LI +M ++PNA+IWGA+L G KL++N 
Sbjct: 369 SMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNL 428

Query: 96  DIAQTAVNKLMVLEPHNSGYYSLLVSMYADAN 1
           +IAQ A NKLMVLEP NSGYY+LLV+M A+ N
Sbjct: 429 EIAQVAANKLMVLEPGNSGYYTLLVNMNAEVN 460


>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 600

 Score =  126 bits (316), Expect = 2e-27
 Identities = 58/91 (63%), Positives = 75/91 (82%)
 Frame = -3

Query: 279 INMTRDYSIAPQIEHYGCMVDLLCKAGLLEDALELIESMTMKPNAIIWGAVLGGSKLYKN 100
           ++MTRDY I P I HYGCMVD+L K+G L +ALELI+SM  +PN+IIWGA+L G KL+ N
Sbjct: 426 LSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGN 485

Query: 99  SDIAQTAVNKLMVLEPHNSGYYSLLVSMYAD 7
            +IA+ AV +LM+LEP NSG+Y+LLVSMYA+
Sbjct: 486 CEIAEDAVEQLMILEPMNSGHYNLLVSMYAE 516


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