BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009679
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|2...   391   e-106
ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containi...   372   e-100
ref|XP_002525463.1| pentatricopeptide repeat-containing protein,...   369   e-100
ref|XP_003631749.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   358   1e-96
emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]   358   1e-96

>ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|222857522|gb|EEE95069.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  391 bits (1005), Expect = e-106
 Identities = 189/292 (64%), Positives = 234/292 (80%), Gaps = 1/292 (0%)
 Frame = +2

Query: 2   FDVMPDRDVVSWTGVIDGYTRADRANEALYLFR-MMVDEGVKPSELTMLVVFPSVWNVRC 178
           FD MP+++VVSWTG+IDGY R ++ +E L LFR M+V EG+KP+E+T+L + P++ N+  
Sbjct: 46  FDEMPEKNVVSWTGIIDGYIRNNKYSEGLSLFRRMVVCEGIKPTEITILAILPAISNMGE 105

Query: 179 LALCRCIHAYTEKSGFSVSDIRVSNSLIDVYAKCGSADGAFQVFECISEDRKNLVSWTSI 358
           L  C  IH Y EK GF+  DIRV+NS+ID Y+KCG    AF+ FE IS +RKNLVSWTSI
Sbjct: 106 LKSCSLIHGYAEKRGFNAFDIRVANSIIDCYSKCGCIASAFKFFEDISVERKNLVSWTSI 165

Query: 359 ISCCATYGMVKEAVEFFKKVEDMGFKPNRVTFLSILSACSHGGLVDEGLKFFKKMVTECG 538
           IS  A +GM KEAVE+F+++E  G KPNRVTFLS+L+ACSHGGLVDEGL+ F KMV E G
Sbjct: 166 ISGFAMHGMWKEAVEYFERMEKAGLKPNRVTFLSVLNACSHGGLVDEGLRCFYKMVNEHG 225

Query: 539 IVPDIKHYGCIVDMLGRAGRLDEAENMAINIPSNMISVIIWRTLLGACSLHGNAEMGERV 718
           ++PDIKHYGC+VDMLGR GRL+EAENMA+ IPS +++V+IWRTLLGACS HGN EMGERV
Sbjct: 226 VLPDIKHYGCVVDMLGRTGRLEEAENMALEIPSEIVNVVIWRTLLGACSFHGNVEMGERV 285

Query: 719 ARKIMEMERGYAGDYVLLSNIFVDVGRYTDSEGVRGVMDKRNALKVPGLSSV 874
            RKIMEMERGY GDYVL+ NIF   GRY D+E +R +M+KRNA K+PG S V
Sbjct: 286 TRKIMEMERGYGGDYVLMYNIFAGAGRYEDAERLRKLMNKRNAFKLPGNSLV 337


>ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
            mitochondrial-like [Vitis vinifera]
          Length = 470

 Score =  372 bits (954), Expect = e-100
 Identities = 180/289 (62%), Positives = 223/289 (77%), Gaps = 1/289 (0%)
 Frame = +2

Query: 5    DVMPDRDVVSWTGVIDGYTRADRANEALYLF-RMMVDEGVKPSELTMLVVFPSVWNVRCL 181
            D MP   VVSWT +IDGYTR ++  +AL LF  M +DEG+KP+E+T+L +FP++ N+  L
Sbjct: 180  DEMPRPTVVSWTTIIDGYTRMNQPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGAL 239

Query: 182  ALCRCIHAYTEKSGFSVSDIRVSNSLIDVYAKCGSADGAFQVFECISEDRKNLVSWTSII 361
             +C+ IH Y EKSG + SDIR+  SL+D YAKCG  + A  VF  I+   +NLVSWTSII
Sbjct: 240  EICQLIHTYGEKSGLNASDIRIRTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSII 299

Query: 362  SCCATYGMVKEAVEFFKKVEDMGFKPNRVTFLSILSACSHGGLVDEGLKFFKKMVTECGI 541
            S  A +GM KEA+E F++++    KPNR+TFLS+L+ACSHGGLV+EGLK F KMV EC I
Sbjct: 300  SAFAMHGMAKEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQI 359

Query: 542  VPDIKHYGCIVDMLGRAGRLDEAENMAINIPSNMISVIIWRTLLGACSLHGNAEMGERVA 721
             PD+KHYGC++DMLGRAGRLDEAE MA+ IP  +++V+IWRTLLGACS HGN EMG RV 
Sbjct: 360  SPDVKHYGCLIDMLGRAGRLDEAEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVT 419

Query: 722  RKIMEMERGYAGDYVLLSNIFVDVGRYTDSEGVRGVMDKRNALKVPGLS 868
            RKI+EMER Y GDYVLLSNIF  VGR+ D E VR +MD+RNA KVPGLS
Sbjct: 420  RKILEMERKYGGDYVLLSNIFAGVGRFWDVERVRRLMDERNASKVPGLS 468


>ref|XP_002525463.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535276|gb|EEF36953.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 337

 Score =  369 bits (948), Expect = e-100
 Identities = 182/292 (62%), Positives = 226/292 (77%), Gaps = 1/292 (0%)
 Frame = +2

Query: 2   FDVMPDRDVVSWTGVIDGYTRADRANEALYLFRMMVD-EGVKPSELTMLVVFPSVWNVRC 178
           FD MP+++VVSWTG+IDGY R +R  E L LFR MV  EG+ PSE+T+L + P++  +  
Sbjct: 46  FDDMPEKNVVSWTGIIDGYVRMNRITEGLALFRRMVSFEGIAPSEITILAILPAISGIGE 105

Query: 179 LALCRCIHAYTEKSGFSVSDIRVSNSLIDVYAKCGSADGAFQVFECISEDRKNLVSWTSI 358
           L  C  IH   EK GF+ SDIRV+NS+ID YAKCG    A + FE IS +RKNLVSWTSI
Sbjct: 106 LQNCGLIHCLVEKRGFNSSDIRVTNSIIDTYAKCGCIVSASRFFEEISVERKNLVSWTSI 165

Query: 359 ISCCATYGMVKEAVEFFKKVEDMGFKPNRVTFLSILSACSHGGLVDEGLKFFKKMVTECG 538
           IS  A +GM +EAV+ F+ +E  G KPNRVTFLS+L+ACSHGGLV EG +FF+KMV +  
Sbjct: 166 ISGFAMHGMGQEAVKRFENMERTGLKPNRVTFLSVLNACSHGGLVAEGHEFFEKMVNQYS 225

Query: 539 IVPDIKHYGCIVDMLGRAGRLDEAENMAINIPSNMISVIIWRTLLGACSLHGNAEMGERV 718
           I+PDIKHYGC+VDMLGR GRL+EAE +A+ IPS +++ +IWRTLLGACS HGN+E+GERV
Sbjct: 226 ILPDIKHYGCLVDMLGRTGRLEEAEKLALGIPSEIVNAVIWRTLLGACSFHGNSEIGERV 285

Query: 719 ARKIMEMERGYAGDYVLLSNIFVDVGRYTDSEGVRGVMDKRNALKVPGLSSV 874
            RKIMEMERGY GDYVL+ NIF  VGR+ D+E +R +MD+RNA KVPG S V
Sbjct: 286 TRKIMEMERGYGGDYVLMYNIFAGVGRFEDAERLRVLMDERNAFKVPGHSLV 337


>ref|XP_003631749.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g09220, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  358 bits (920), Expect = 1e-96
 Identities = 177/293 (60%), Positives = 222/293 (75%), Gaps = 2/293 (0%)
 Frame = +2

Query: 2    FDVMPDRDVVSWTGVIDGYTRADRANEALYLFR-MMVDEGVKPSELTMLVVFPSVWNVRC 178
            FD MP   VVSWT +IDGYTR ++  +AL LFR M +DEG+KP+E+ +L +FP++ N+  
Sbjct: 221  FDEMPMPTVVSWTTIIDGYTRMNQPKQALALFRTMFIDEGIKPTEIALLAIFPAISNLGA 280

Query: 179  LALCRCIHAYTEKSGFSVSDIRVSNSLIDVYAKCGSADGAFQVFECISEDRKNLVSWTSI 358
            L LC+ +H Y EKSG + SDIR+ NSL+D YAKCG  +   +VF  I+   +NLVSWTS+
Sbjct: 281  LELCQLVHMYGEKSGLNASDIRIRNSLLDTYAKCGCMESIXRVFGEIAAKSRNLVSWTSV 340

Query: 359  ISCCATYGMVKEAVEFFKKVEDMGFKPNRVTFLSILSACSHGGLVDEG-LKFFKKMVTEC 535
            IS  A +GM KEA+E  K+      KPNR+TFLS+L+ACSHGGLV+EG LKFF KMV E 
Sbjct: 341  ISAFAMHGMAKEALEILKEC----LKPNRITFLSVLNACSHGGLVEEGRLKFFAKMVNEY 396

Query: 536  GIVPDIKHYGCIVDMLGRAGRLDEAENMAINIPSNMISVIIWRTLLGACSLHGNAEMGER 715
             + PD+KHYG ++DMLGRAGRLDEAE MA+  P ++++V+IWRTLLGACS HGN EMG R
Sbjct: 397  QMSPDVKHYGGLIDMLGRAGRLDEAEKMALEFPDDVVNVVIWRTLLGACSFHGNVEMGAR 456

Query: 716  VARKIMEMERGYAGDYVLLSNIFVDVGRYTDSEGVRGVMDKRNALKVPGLSSV 874
            V RKI+EMER Y GDYVLLSNIF  VGR+ D E VR +MD+RNA K+PGLS V
Sbjct: 457  VTRKILEMERKYGGDYVLLSNIFAGVGRFWDVERVRRLMDERNASKLPGLSLV 509


>emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
          Length = 538

 Score =  358 bits (920), Expect = 1e-96
 Identities = 173/284 (60%), Positives = 219/284 (77%), Gaps = 1/284 (0%)
 Frame = +2

Query: 5    DVMPDRDVVSWTGVIDGYTRADRANEALYLF-RMMVDEGVKPSELTMLVVFPSVWNVRCL 181
            D MP   VVSWT +IDGYTR ++  +AL LF  M +DEG+KP+E+T+L +FP++ N+  L
Sbjct: 180  DEMPMPTVVSWTTIIDGYTRMNQPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGAL 239

Query: 182  ALCRCIHAYTEKSGFSVSDIRVSNSLIDVYAKCGSADGAFQVFECISEDRKNLVSWTSII 361
             +C+ IH Y EKSG + SDIR+  SL+D YAKCG  + A +VF  I    +NLVSWTSII
Sbjct: 240  EICQLIHTYGEKSGLNASDIRIRTSLLDTYAKCGCIESASRVFGEIDAKSRNLVSWTSII 299

Query: 362  SCCATYGMVKEAVEFFKKVEDMGFKPNRVTFLSILSACSHGGLVDEGLKFFKKMVTECGI 541
            S  A +GM KEA+E F++++    KPNR+TFLS+L+ACSHGGLV+EGLKFF KMV +  I
Sbjct: 300  SAFAMHGMAKEALENFERMQKECLKPNRITFLSVLNACSHGGLVEEGLKFFTKMVNKYQI 359

Query: 542  VPDIKHYGCIVDMLGRAGRLDEAENMAINIPSNMISVIIWRTLLGACSLHGNAEMGERVA 721
             PD+KHYGC++DMLGRAGRLDEAE MA+ IP+ +++V+IWRTLLGACS HGN EMG RV 
Sbjct: 360  SPDVKHYGCLIDMLGRAGRLDEAEKMALEIPNYVVNVVIWRTLLGACSFHGNVEMGARVT 419

Query: 722  RKIMEMERGYAGDYVLLSNIFVDVGRYTDSEGVRGVMDKRNALK 853
            RKI+EME+ Y GDYVLLSNIF  VGR+ D E VR +MD+RNA K
Sbjct: 420  RKILEMEKKYGGDYVLLSNIFAGVGRFWDVERVRRLMDERNASK 463