BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009669
         (1247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   403   e-110
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      400   e-109
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   399   e-109
ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              396   e-108

>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  403 bits (1035), Expect = e-110
 Identities = 198/247 (80%), Positives = 225/247 (91%)
 Frame = -2

Query: 1246 SVQEIDYSDPLRYLRQTTSSSRLLTITEEQELSEGIQVLLRLERIHKELNERYGGEPSFM 1067
            S+QE+DYSDPLRYLR TTS+SRLLT +EE ELS  IQ LL+LER+ +EL ERYGG+P+F 
Sbjct: 249  SLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFA 308

Query: 1066 QWAAAAGVDQMTLRRQINYGTFCKDKMIKSNVRLVISIAKKYLGTGMNLQDLVQEGCRGL 887
            QWAAAAGVDQ TLR++IN+GT CKDKMIKSN+RLVISIAK Y G GMNLQDLVQEGCRGL
Sbjct: 309  QWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 368

Query: 886  LRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVDATYRVKEARRNLYN 707
            +RGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMV+ATYRVKEAR+ LY+
Sbjct: 369  VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 428

Query: 706  EHGRQASNEEIAEAAGLSMRRLSAVLLAPKAPRSLDQKIGFDLNLKPSEITADPEAETSE 527
            E+GR   +EE+AEAAGLSM+RLSAVLL PKAPRSLDQKIG +++LKPSE+ ADPEAET+E
Sbjct: 429  ENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAE 488

Query: 526  EILMKQF 506
            E+LMKQF
Sbjct: 489  ELLMKQF 495



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 45/52 (86%), Positives = 49/52 (94%)
 Frame = -1

Query: 365 RFGLDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKSLQQYLYA 210
           RFGL+DGRMKTLQEIGE+MGVSRERIRQIES AFRKLKNK+RTK L+QYL A
Sbjct: 518 RFGLEDGRMKTLQEIGEIMGVSRERIRQIESSAFRKLKNKKRTKQLKQYLLA 569


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  400 bits (1029), Expect = e-109
 Identities = 195/247 (78%), Positives = 225/247 (91%)
 Frame = -2

Query: 1246 SVQEIDYSDPLRYLRQTTSSSRLLTITEEQELSEGIQVLLRLERIHKELNERYGGEPSFM 1067
            SVQE+DYSDPLRYLR  T+SSRLLT +EE ELS GIQ LL+LE++H EL  R+G  PSF+
Sbjct: 255  SVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFV 314

Query: 1066 QWAAAAGVDQMTLRRQINYGTFCKDKMIKSNVRLVISIAKKYLGTGMNLQDLVQEGCRGL 887
            QWAAAAG+DQ TLRR++N+GTFCKDKMIKSNVRLVISIAK Y G+GMNLQDLVQEGCRGL
Sbjct: 315  QWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGL 374

Query: 886  LRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVDATYRVKEARRNLYN 707
            +RGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMV+ATYRVKEAR+ L +
Sbjct: 375  VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLS 434

Query: 706  EHGRQASNEEIAEAAGLSMRRLSAVLLAPKAPRSLDQKIGFDLNLKPSEITADPEAETSE 527
            E+G+Q +NEE+AEA GLSM+RL+AVL+ PKAPRSLDQKIGF++NLKPSE+ ADPEAET+E
Sbjct: 435  ENGKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAE 494

Query: 526  EILMKQF 506
            ++L KQF
Sbjct: 495  DLLTKQF 501



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 42/51 (82%), Positives = 49/51 (96%)
 Frame = -1

Query: 365 RFGLDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKSLQQYLY 213
           RFGL+DGRMKTLQEIGELMGVSRERIRQIES AFRKL+NK++T +LQQY++
Sbjct: 524 RFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKKKTINLQQYMF 574


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  399 bits (1025), Expect = e-109
 Identities = 195/247 (78%), Positives = 224/247 (90%)
 Frame = -2

Query: 1246 SVQEIDYSDPLRYLRQTTSSSRLLTITEEQELSEGIQVLLRLERIHKELNERYGGEPSFM 1067
            SVQE+DYSDPLRYLR TT++SRLLT TEE ELSEGIQ LL+LER+ +EL ERYG EP+F 
Sbjct: 260  SVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFA 319

Query: 1066 QWAAAAGVDQMTLRRQINYGTFCKDKMIKSNVRLVISIAKKYLGTGMNLQDLVQEGCRGL 887
            QWAAAAGV+Q TLR+++NYGT CKDKMIKSN+RLVISIAK Y G GMNLQDLVQEGCRGL
Sbjct: 320  QWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL 379

Query: 886  LRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVDATYRVKEARRNLYN 707
            +RGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMV+ATYRVKEAR+ L +
Sbjct: 380  VRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLH 439

Query: 706  EHGRQASNEEIAEAAGLSMRRLSAVLLAPKAPRSLDQKIGFDLNLKPSEITADPEAETSE 527
            E+GR   ++EIAEAAGLSM+RL+AVL+ PKAPRSL+QKIG + NLKPSE+ +DPEAET E
Sbjct: 440  ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCE 499

Query: 526  EILMKQF 506
            ++L+KQF
Sbjct: 500  DMLIKQF 506



 Score = 94.0 bits (232), Expect = 7e-17
 Identities = 44/50 (88%), Positives = 49/50 (98%)
 Frame = -1

Query: 365 RFGLDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKSLQQYL 216
           RFG++DGRMKTLQEIGE+MGVSRERIRQIESCAFRKLKNK+RTK LQQY+
Sbjct: 529 RFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 578


>ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|222858122|gb|EEE95669.1|
            predicted protein [Populus trichocarpa]
          Length = 567

 Score =  398 bits (1022), Expect = e-108
 Identities = 195/246 (79%), Positives = 225/246 (91%)
 Frame = -2

Query: 1243 VQEIDYSDPLRYLRQTTSSSRLLTITEEQELSEGIQVLLRLERIHKELNERYGGEPSFMQ 1064
            +QE+D SDPLR+ R  +SSSRLL+ TEE ELSEGIQ LL+LERI +EL ER+GGEPSF Q
Sbjct: 248  LQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQ 307

Query: 1063 WAAAAGVDQMTLRRQINYGTFCKDKMIKSNVRLVISIAKKYLGTGMNLQDLVQEGCRGLL 884
            WAAAAGVDQ+TLR+++NYG  CKDKMIKSNVRLVISIAK Y GTGMNLQDLVQEGCRGL+
Sbjct: 308  WAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLV 367

Query: 883  RGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVDATYRVKEARRNLYNE 704
            RGAEKFDASKGFKFSTYAHWWIKQAVRK LSD+SRTIRLPFHMVDATYRVKEAR+ LY+E
Sbjct: 368  RGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSE 427

Query: 703  HGRQASNEEIAEAAGLSMRRLSAVLLAPKAPRSLDQKIGFDLNLKPSEITADPEAETSEE 524
            +GR   ++E+AEAAGLSM+RLSAVLL PKAPRSLDQK+GF+++LK SE+TADPEAET+E+
Sbjct: 428  NGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAED 487

Query: 523  ILMKQF 506
            +LMK+F
Sbjct: 488  LLMKEF 493



 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -1

Query: 365 RFGLDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKSLQQYLYA 210
           RFG++DGRMKTLQEIGELMGVSRER+RQIE  AFRKLKNK RTK L+QY+ A
Sbjct: 516 RFGMEDGRMKTLQEIGELMGVSRERVRQIELSAFRKLKNKNRTKQLRQYMVA 567


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  396 bits (1018), Expect = e-108
 Identities = 194/247 (78%), Positives = 223/247 (90%)
 Frame = -2

Query: 1246 SVQEIDYSDPLRYLRQTTSSSRLLTITEEQELSEGIQVLLRLERIHKELNERYGGEPSFM 1067
            S+QE+DYSDPLRYLR TTS+SRLLT TEE ELSEGIQ LL+LE++ ++L ER+G +P+F 
Sbjct: 255  SLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFA 314

Query: 1066 QWAAAAGVDQMTLRRQINYGTFCKDKMIKSNVRLVISIAKKYLGTGMNLQDLVQEGCRGL 887
            QWAAAAGVDQ TLRR+ NYG  CKDKMIKSN+RLVISIAK Y G GMN+QDLVQEGCRGL
Sbjct: 315  QWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGL 374

Query: 886  LRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVDATYRVKEARRNLYN 707
            +RGAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMV+ATYRVKEAR+ LY+
Sbjct: 375  VRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYS 434

Query: 706  EHGRQASNEEIAEAAGLSMRRLSAVLLAPKAPRSLDQKIGFDLNLKPSEITADPEAETSE 527
            E+GR  +NEE+AEA GLSM+RL+AVLL PKAPRSLDQKIG + NLKPSE+ ADP+AET+E
Sbjct: 435  ENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAE 494

Query: 526  EILMKQF 506
            E+L+KQF
Sbjct: 495  ELLIKQF 501



 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = -1

Query: 365 RFGLDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKSLQQYL 216
           R+GL+DGR KTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTK LQQYL
Sbjct: 524 RYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYL 573