BLASTX nr result

ID: Bupleurum21_contig00009643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009643
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274638.2| PREDICTED: protein Red isoform 3 [Vitis vini...   273   1e-71
ref|XP_002274600.1| PREDICTED: protein Red isoform 2 [Vitis vini...   273   1e-71
ref|XP_002274576.1| PREDICTED: protein Red isoform 1 [Vitis vini...   273   1e-71
ref|XP_004136540.1| PREDICTED: protein Red-like [Cucumis sativus...   262   2e-68
ref|XP_003533803.1| PREDICTED: protein Red [Glycine max]              261   5e-68

>ref|XP_002274638.2| PREDICTED: protein Red isoform 3 [Vitis vinifera]
          Length = 536

 Score =  273 bits (698), Expect = 1e-71
 Identities = 137/179 (76%), Positives = 144/179 (80%)
 Frame = +1

Query: 1   MQADIDAQQDPRLMTQEQKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG 180
           +QA +   QDPR MTQE+KDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG
Sbjct: 360 VQAGMGIPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG 419

Query: 181 YQEYNRXXXXXXXXXXLSKMDMGGRAKGXXXXXXXXXXXXXXXXXXXLHRWDFETEEDWA 360
           YQEYNR          LSKMDMGGRAKG                   LHRWDFETEE+WA
Sbjct: 420 YQEYNREVVDSDDEDDLSKMDMGGRAKGR------------------LHRWDFETEEEWA 461

Query: 361 TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILTRKKLEKGEIDDD 537
           TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKIL RKK+EKGE++DD
Sbjct: 462 TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILARKKMEKGEMNDD 520


>ref|XP_002274600.1| PREDICTED: protein Red isoform 2 [Vitis vinifera]
          Length = 567

 Score =  273 bits (698), Expect = 1e-71
 Identities = 137/179 (76%), Positives = 144/179 (80%)
 Frame = +1

Query: 1   MQADIDAQQDPRLMTQEQKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG 180
           +QA +   QDPR MTQE+KDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG
Sbjct: 391 VQAGMGIPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG 450

Query: 181 YQEYNRXXXXXXXXXXLSKMDMGGRAKGXXXXXXXXXXXXXXXXXXXLHRWDFETEEDWA 360
           YQEYNR          LSKMDMGGRAKG                   LHRWDFETEE+WA
Sbjct: 451 YQEYNREVVDSDDEDDLSKMDMGGRAKGR------------------LHRWDFETEEEWA 492

Query: 361 TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILTRKKLEKGEIDDD 537
           TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKIL RKK+EKGE++DD
Sbjct: 493 TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILARKKMEKGEMNDD 551


>ref|XP_002274576.1| PREDICTED: protein Red isoform 1 [Vitis vinifera]
           gi|297738505|emb|CBI27750.3| unnamed protein product
           [Vitis vinifera]
          Length = 566

 Score =  273 bits (698), Expect = 1e-71
 Identities = 137/179 (76%), Positives = 144/179 (80%)
 Frame = +1

Query: 1   MQADIDAQQDPRLMTQEQKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG 180
           +QA +   QDPR MTQE+KDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG
Sbjct: 390 VQAGMGIPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG 449

Query: 181 YQEYNRXXXXXXXXXXLSKMDMGGRAKGXXXXXXXXXXXXXXXXXXXLHRWDFETEEDWA 360
           YQEYNR          LSKMDMGGRAKG                   LHRWDFETEE+WA
Sbjct: 450 YQEYNREVVDSDDEDDLSKMDMGGRAKGR------------------LHRWDFETEEEWA 491

Query: 361 TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILTRKKLEKGEIDDD 537
           TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKIL RKK+EKGE++DD
Sbjct: 492 TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILARKKMEKGEMNDD 550


>ref|XP_004136540.1| PREDICTED: protein Red-like [Cucumis sativus]
           gi|449514795|ref|XP_004164482.1| PREDICTED: protein
           Red-like [Cucumis sativus]
          Length = 561

 Score =  262 bits (670), Expect = 2e-68
 Identities = 133/179 (74%), Positives = 139/179 (77%)
 Frame = +1

Query: 1   MQADIDAQQDPRLMTQEQKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPG 180
           MQ   + QQDPRLMTQE+KDRGLGSVFKRDDQRLQQLRE+DAREKDPNFISESYSECYPG
Sbjct: 390 MQTGANIQQDPRLMTQEEKDRGLGSVFKRDDQRLQQLRERDAREKDPNFISESYSECYPG 449

Query: 181 YQEYNRXXXXXXXXXXLSKMDMGGRAKGXXXXXXXXXXXXXXXXXXXLHRWDFETEEDWA 360
           YQEYNR          LSKMDMGGRAKG                   LHRWDFETEE+WA
Sbjct: 450 YQEYNREIVDSDDEDDLSKMDMGGRAKG------------------RLHRWDFETEEEWA 491

Query: 361 TYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILTRKKLEKGEIDDD 537
            YNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKL NELHKINKIL +KK+EK    DD
Sbjct: 492 KYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNELHKINKILAKKKMEKEMNGDD 550


>ref|XP_003533803.1| PREDICTED: protein Red [Glycine max]
          Length = 567

 Score =  261 bits (667), Expect = 5e-68
 Identities = 131/172 (76%), Positives = 137/172 (79%)
 Frame = +1

Query: 4   QADIDAQQDPRLMTQEQKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGY 183
           QAD++   DPR MTQE+KDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGY
Sbjct: 392 QADLNLPLDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGY 451

Query: 184 QEYNRXXXXXXXXXXLSKMDMGGRAKGXXXXXXXXXXXXXXXXXXXLHRWDFETEEDWAT 363
           QEYNR          LSKMDMGGRAKG                   LHRWDFETEE+WAT
Sbjct: 452 QEYNREIVDSDDEDDLSKMDMGGRAKG------------------RLHRWDFETEEEWAT 493

Query: 364 YNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNELHKINKILTRKKLEK 519
           YNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKL N+LHKINKIL RKK+EK
Sbjct: 494 YNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILARKKMEK 545


Top