BLASTX nr result

ID: Bupleurum21_contig00009627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009627
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523637.1| abc transporter, putative [Ricinus communis]...   241   6e-62
ref|XP_002310964.1| white-brown-complex ABC transporter family [...   240   1e-61
ref|XP_002267203.1| PREDICTED: ABC transporter I family member 6...   238   3e-61
ref|XP_004146320.1| PREDICTED: ABC transporter I family member 6...   234   4e-60
emb|CAN61388.1| hypothetical protein VITISV_019393 [Vitis vinifera]   231   6e-59

>ref|XP_002523637.1| abc transporter, putative [Ricinus communis]
           gi|223537089|gb|EEF38723.1| abc transporter, putative
           [Ricinus communis]
          Length = 326

 Score =  241 bits (614), Expect = 6e-62
 Identities = 123/161 (76%), Positives = 134/161 (83%)
 Frame = +2

Query: 2   VHAVMGKNGSGKSTFAKVLVGHRDYEVTGGSIVYKGENLLDMEPEERSIAGLFMSFQSPV 181
           VHAVMGKNGSGKSTF+KVLVGH DYEVTGGS+V+KGENLLDMEPEERS+AGLFMSFQSPV
Sbjct: 108 VHAVMGKNGSGKSTFSKVLVGHPDYEVTGGSVVFKGENLLDMEPEERSLAGLFMSFQSPV 167

Query: 182 EIPGVSNIDFLLMAYNARRRKLGLPXXXXXXXXXXXXXXXXXXXXEFSPIEFYGYIMPKL 361
           EIPGV+NIDFL MAYNARR+KLGLP                    E  PIEFY Y+ PKL
Sbjct: 168 EIPGVNNIDFLNMAYNARRKKLGLP--------------------ELGPIEFYAYLFPKL 207

Query: 362 EVVNIKPDFLNRNVNEGFSGGEKKRNEILQLAVLGAELSIL 484
           E+VN+K DFLNRNVNEGFSGGEKKRNEILQLAVLGA+L+IL
Sbjct: 208 ELVNMKSDFLNRNVNEGFSGGEKKRNEILQLAVLGADLAIL 248


>ref|XP_002310964.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222850784|gb|EEE88331.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 327

 Score =  240 bits (612), Expect = 1e-61
 Identities = 122/161 (75%), Positives = 133/161 (82%)
 Frame = +2

Query: 2   VHAVMGKNGSGKSTFAKVLVGHRDYEVTGGSIVYKGENLLDMEPEERSIAGLFMSFQSPV 181
           VHA+MGKNGSGKSTF+KVL GH DYEVTGGS+V+KGENLLDMEPEERS+AGLFMSFQSPV
Sbjct: 109 VHAIMGKNGSGKSTFSKVLAGHPDYEVTGGSVVFKGENLLDMEPEERSLAGLFMSFQSPV 168

Query: 182 EIPGVSNIDFLLMAYNARRRKLGLPXXXXXXXXXXXXXXXXXXXXEFSPIEFYGYIMPKL 361
           EIPGV+NIDFL MAYNARRRKLGLP                    E  PIEFY Y+ PKL
Sbjct: 169 EIPGVNNIDFLNMAYNARRRKLGLP--------------------ELGPIEFYAYLFPKL 208

Query: 362 EVVNIKPDFLNRNVNEGFSGGEKKRNEILQLAVLGAELSIL 484
           E+VN+K DFLNRNVNEGFSGGE+KRNEILQLAVLGAEL+IL
Sbjct: 209 ELVNMKSDFLNRNVNEGFSGGERKRNEILQLAVLGAELAIL 249


>ref|XP_002267203.1| PREDICTED: ABC transporter I family member 6, chloroplastic [Vitis
           vinifera] gi|296087808|emb|CBI35064.3| unnamed protein
           product [Vitis vinifera]
          Length = 321

 Score =  238 bits (608), Expect = 3e-61
 Identities = 121/161 (75%), Positives = 135/161 (83%)
 Frame = +2

Query: 2   VHAVMGKNGSGKSTFAKVLVGHRDYEVTGGSIVYKGENLLDMEPEERSIAGLFMSFQSPV 181
           VHAVMGKNGSGKSTF+KVLVGH DYEVTGG++V+KGENLLDM+PEER++AGLFMSFQSPV
Sbjct: 101 VHAVMGKNGSGKSTFSKVLVGHPDYEVTGGTVVFKGENLLDMDPEERALAGLFMSFQSPV 160

Query: 182 EIPGVSNIDFLLMAYNARRRKLGLPXXXXXXXXXXXXXXXXXXXXEFSPIEFYGYIMPKL 361
           EIPGVSNIDFL MAYNA+RRKLGLP                    E  PIEFYGYI PKL
Sbjct: 161 EIPGVSNIDFLNMAYNAQRRKLGLP--------------------ELGPIEFYGYISPKL 200

Query: 362 EVVNIKPDFLNRNVNEGFSGGEKKRNEILQLAVLGAELSIL 484
           ++VN+K DFLNRNVNEGFSGGE+KRNEILQLAVLGA+L+IL
Sbjct: 201 DIVNMKIDFLNRNVNEGFSGGERKRNEILQLAVLGADLAIL 241


>ref|XP_004146320.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
           [Cucumis sativus] gi|449523329|ref|XP_004168676.1|
           PREDICTED: ABC transporter I family member 6,
           chloroplastic-like [Cucumis sativus]
          Length = 329

 Score =  234 bits (598), Expect = 4e-60
 Identities = 121/161 (75%), Positives = 132/161 (81%)
 Frame = +2

Query: 2   VHAVMGKNGSGKSTFAKVLVGHRDYEVTGGSIVYKGENLLDMEPEERSIAGLFMSFQSPV 181
           VHA+MGKNGSGKSTFAKVLVGH DYEVTGGSIV+KG +LL+MEPEERS+AGLFMSFQSPV
Sbjct: 111 VHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSIVFKGSDLLEMEPEERSLAGLFMSFQSPV 170

Query: 182 EIPGVSNIDFLLMAYNARRRKLGLPXXXXXXXXXXXXXXXXXXXXEFSPIEFYGYIMPKL 361
           EIPGVSNIDFL MAYNARRRKLGL                     E  PIEFY YI PKL
Sbjct: 171 EIPGVSNIDFLNMAYNARRRKLGL--------------------AELGPIEFYAYIFPKL 210

Query: 362 EVVNIKPDFLNRNVNEGFSGGEKKRNEILQLAVLGAELSIL 484
           ++VN+K DFLNRNVNEGFSGGE+KRNEILQLAVLGAE++IL
Sbjct: 211 DLVNMKTDFLNRNVNEGFSGGERKRNEILQLAVLGAEMAIL 251


>emb|CAN61388.1| hypothetical protein VITISV_019393 [Vitis vinifera]
          Length = 217

 Score =  231 bits (588), Expect = 6e-59
 Identities = 117/157 (74%), Positives = 131/157 (83%)
 Frame = +2

Query: 14  MGKNGSGKSTFAKVLVGHRDYEVTGGSIVYKGENLLDMEPEERSIAGLFMSFQSPVEIPG 193
           MGKNGSGKSTF+KVLVGH DYEVTGG++V+KGENLLDM+PEER++AGLFMSFQSPVEIPG
Sbjct: 1   MGKNGSGKSTFSKVLVGHPDYEVTGGTVVFKGENLLDMDPEERALAGLFMSFQSPVEIPG 60

Query: 194 VSNIDFLLMAYNARRRKLGLPXXXXXXXXXXXXXXXXXXXXEFSPIEFYGYIMPKLEVVN 373
           VSNIDFL MAYNA+RRKLGLP                    E  PIEFYGYI PKL++VN
Sbjct: 61  VSNIDFLNMAYNAQRRKLGLP--------------------ELGPIEFYGYISPKLDIVN 100

Query: 374 IKPDFLNRNVNEGFSGGEKKRNEILQLAVLGAELSIL 484
           +K DFLNRNVNEGFSGGE+KRNEILQLAVLGA+L+IL
Sbjct: 101 MKIDFLNRNVNEGFSGGERKRNEILQLAVLGADLAIL 137


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