BLASTX nr result

ID: Bupleurum21_contig00009618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009618
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI64152.1| hydroxymethylbutenyl diphosphate reductase [Campt...   118   6e-25
gb|AFQ98369.1| hydroxymethylbutenyl diphosphate reductase [Camel...   110   9e-23
dbj|BAJ33798.1| unnamed protein product [Thellungiella halophila]     107   1e-21
gb|ADZ29096.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate re...   105   5e-21
ref|XP_002867122.1| hypothetical protein ARALYDRAFT_491231 [Arab...   105   5e-21

>gb|ABI64152.1| hydroxymethylbutenyl diphosphate reductase [Camptotheca acuminata]
          Length = 459

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/91 (65%), Positives = 70/91 (76%)
 Frame = -3

Query: 274 MAVPLQFCRPSSITGVFSSENKLISFRKPSSFRCAAGESPASQVPAVTAGSDFDAKVFRK 95
           MA+ LQFCR S+   +   E+K+  +RKP S RCA+GESP+S   +V   SDFDAKVFRK
Sbjct: 1   MAISLQFCRLSTRVDLSLLESKVFGYRKPLSVRCASGESPSS---SVAVDSDFDAKVFRK 57

Query: 94  NLTRSDNYNRKGFGRKEETLELMNREYTSDV 2
           NLTRS NYNRKGFG KEETLE MNREYTSD+
Sbjct: 58  NLTRSKNYNRKGFGHKEETLEPMNREYTSDI 88


>gb|AFQ98369.1| hydroxymethylbutenyl diphosphate reductase [Camellia sinensis]
          Length = 459

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/91 (61%), Positives = 67/91 (73%)
 Frame = -3

Query: 274 MAVPLQFCRPSSITGVFSSENKLISFRKPSSFRCAAGESPASQVPAVTAGSDFDAKVFRK 95
           MA+ LQ CR ++ T +     ++   RKP S RC+AGESP+   P+V    DFDAKVFRK
Sbjct: 1   MAISLQLCRFTTRTDISLPGLRVFPCRKPLSVRCSAGESPS---PSVAVDEDFDAKVFRK 57

Query: 94  NLTRSDNYNRKGFGRKEETLELMNREYTSDV 2
           NLTRS NYNR+GFG KEETLELMNREYTSD+
Sbjct: 58  NLTRSKNYNRRGFGHKEETLELMNREYTSDI 88


>dbj|BAJ33798.1| unnamed protein product [Thellungiella halophila]
          Length = 466

 Score =  107 bits (267), Expect = 1e-21
 Identities = 60/96 (62%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
 Frame = -3

Query: 274 MAVPLQFCRPSSITGVFSSENKL-----ISFRKPSSFRCAAGESPASQVPAVTAGSDFDA 110
           MAV LQFCR       F  EN L     I  RKP S RCA+G+  A   P+V   SDFDA
Sbjct: 1   MAVALQFCRLCVRPDTFVLENHLSGSGGIRRRKPLSVRCASGDENAPS-PSVVMDSDFDA 59

Query: 109 KVFRKNLTRSDNYNRKGFGRKEETLELMNREYTSDV 2
           K FRKNLTRS+NYNRKGFG KEETL+LMNREYTSD+
Sbjct: 60  KTFRKNLTRSENYNRKGFGYKEETLKLMNREYTSDI 95


>gb|ADZ29096.1| 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase [Ipomoea
           batatas]
          Length = 461

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/91 (58%), Positives = 64/91 (70%)
 Frame = -3

Query: 274 MAVPLQFCRPSSITGVFSSENKLISFRKPSSFRCAAGESPASQVPAVTAGSDFDAKVFRK 95
           MA+PLQF    + T +   + ++   RKP S RC+ GE+ +S   A T  S+FDAK FRK
Sbjct: 1   MAIPLQFSSLPTRTAISLPQPRIFQLRKPLSIRCSTGEADSSSSSA-TVDSEFDAKTFRK 59

Query: 94  NLTRSDNYNRKGFGRKEETLELMNREYTSDV 2
           NLTRS NYNRKGFG KE TLELMNREYTSD+
Sbjct: 60  NLTRSANYNRKGFGHKEATLELMNREYTSDI 90


>ref|XP_002867122.1| hypothetical protein ARALYDRAFT_491231 [Arabidopsis lyrata subsp.
           lyrata] gi|297312958|gb|EFH43381.1| hypothetical protein
           ARALYDRAFT_491231 [Arabidopsis lyrata subsp. lyrata]
          Length = 466

 Score =  105 bits (261), Expect = 5e-21
 Identities = 58/96 (60%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
 Frame = -3

Query: 274 MAVPLQFCRPSSITGVFSSENKL-----ISFRKPSSFRCAAGESPASQVPAVTAGSDFDA 110
           MAV LQFCR       F  EN L     +  RK  S RC++G+  A   P+V   SDFDA
Sbjct: 1   MAVALQFCRLCVRPDTFMLENHLSGSGSLRRRKALSVRCSSGDGNAPS-PSVVMDSDFDA 59

Query: 109 KVFRKNLTRSDNYNRKGFGRKEETLELMNREYTSDV 2
           KVFRKNLTRS+NYNRKGFG KEETL+LMNREYTSD+
Sbjct: 60  KVFRKNLTRSENYNRKGFGHKEETLKLMNREYTSDI 95


Top