BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009590
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854...    86   2e-15
ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa]...    83   2e-14
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...    80   1e-13
ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]...    73   2e-11
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...    71   1e-10

>ref|XP_003635274.1| PREDICTED: uncharacterized protein LOC100854406 [Vitis vinifera]
          Length = 493

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/85 (54%), Positives = 49/85 (57%)
 Frame = +2

Query: 2   GDAGYDPFSRRWTRSRNYYVPKASGGDEAAVAGNGDQTVALVVPDGSGTVSGVXXXXXXX 181
           G+AGYDPFSRRWTRSRNYYV K  GGDEAA   NG+   A V    +GT  G        
Sbjct: 340 GEAGYDPFSRRWTRSRNYYVSKPGGGDEAAAVANGEAPAAFVGAGSNGT-GGKGAEVGVA 398

Query: 182 XXXXXXXXXXXXGKLVDTSAPVDQG 256
                       GKLVDTSAPVDQG
Sbjct: 399 ATAAALEAAADAGKLVDTSAPVDQG 423


>ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa]
           gi|222859693|gb|EEE97240.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 664

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/85 (48%), Positives = 47/85 (55%)
 Frame = +2

Query: 2   GDAGYDPFSRRWTRSRNYYVPKASGGDEAAVAGNGDQTVALVVPDGSGTVSGVXXXXXXX 181
           G+AGYDPFSRRWTRSRNYYV   +GGD+A  A N +      + D    V+G        
Sbjct: 510 GEAGYDPFSRRWTRSRNYYVSNPAGGDDAVAASNSEANDTAALADSDHVVAGAISESGVA 569

Query: 182 XXXXXXXXXXXXGKLVDTSAPVDQG 256
                       GKLVDTSAPVDQG
Sbjct: 570 ATAAALDAAADAGKLVDTSAPVDQG 594


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
           gi|223541691|gb|EEF43239.1| RNA polymerase-associated
           protein RTF1, putative [Ricinus communis]
          Length = 660

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 54/145 (37%), Positives = 70/145 (48%)
 Frame = +2

Query: 2   GDAGYDPFSRRWTRSRNYYVPKASGGDEAAVAGNGDQTVALVVPDGSGTVSGVXXXXXXX 181
           G+AGYDPFSRRWTRSRNYYV K +GGD AA A N + +  + V + + + +GV       
Sbjct: 507 GEAGYDPFSRRWTRSRNYYVSKPAGGD-AAAATNNEASGTVAVANKTESAAGVSAEAGMA 565

Query: 182 XXXXXXXXXXXXGKLVDTSAPVDQGISMCVGMYYWSCVLTGMM*ATEGSPLSVWLFPNGV 361
                       GKLVDT+APVDQG                    TE + L  +  P   
Sbjct: 566 ATAAALEAAADAGKLVDTAAPVDQG--------------------TESNTLHNFELPIS- 604

Query: 362 IKLLLYYGDGAGC*VGYMWYGQRLE 436
           +  L  +G   G   G+M   QR+E
Sbjct: 605 LTALQKFGGAQGAQAGFMARKQRIE 629


>ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]
           gi|222848649|gb|EEE86196.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 662

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/85 (44%), Positives = 45/85 (52%)
 Frame = +2

Query: 2   GDAGYDPFSRRWTRSRNYYVPKASGGDEAAVAGNGDQTVALVVPDGSGTVSGVXXXXXXX 181
           G+AGYDPFSRRWTRSRNYYV K +  D+       +    + V   +  V+GV       
Sbjct: 508 GEAGYDPFSRRWTRSRNYYVSKPAEADDPVATKISEANETVAVAASNQVVAGVMSEAGVA 567

Query: 182 XXXXXXXXXXXXGKLVDTSAPVDQG 256
                       GKLVDTSAPVDQG
Sbjct: 568 ATEAALEAAADAGKLVDTSAPVDQG 592


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 656

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 52/145 (35%), Positives = 63/145 (43%)
 Frame = +2

Query: 2   GDAGYDPFSRRWTRSRNYYVPKASGGDEAAVAGNGDQTVALVVPDGSGTVSGVXXXXXXX 181
           G+AGYDPFSRRWTRSRNYY  K     E A AGN      +     +GT + V       
Sbjct: 505 GEAGYDPFSRRWTRSRNYYAAKPG---EKAAAGNNSVNGNVAGAGSNGTGAPVTAEAGMV 561

Query: 182 XXXXXXXXXXXXGKLVDTSAPVDQGISMCVGMYYWSCVLTGMM*ATEGSPLSVWLFPNGV 361
                       GKLVDTSAPVDQG                    TE + L  +  P   
Sbjct: 562 ATAAALEAAAGAGKLVDTSAPVDQG--------------------TESNMLHNFELPIS- 600

Query: 362 IKLLLYYGDGAGC*VGYMWYGQRLE 436
           + LL  +G   G   G+M   Q++E
Sbjct: 601 LALLQKFGGAQGAQAGFMARKQKIE 625