BLASTX nr result

ID: Bupleurum21_contig00009568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009568
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527743.1| PREDICTED: protein RCC2-like [Glycine max]        106   1e-36
ref|XP_002278592.1| PREDICTED: protein RCC2 homolog [Vitis vinif...    99   6e-36
emb|CBI19816.3| unnamed protein product [Vitis vinifera]               99   6e-36
ref|XP_003523611.1| PREDICTED: protein RCC2-like [Glycine max]        102   2e-35
ref|XP_002301995.1| predicted protein [Populus trichocarpa] gi|2...   103   8e-35

>ref|XP_003527743.1| PREDICTED: protein RCC2-like [Glycine max]
          Length = 548

 Score =  106 bits (264), Expect(2) = 1e-36
 Identities = 46/51 (90%), Positives = 50/51 (98%)
 Frame = +1

Query: 1   KPLMDLSGWNIRCMDSGSMHHFVGADSSCISWGVAQSGELGYGPLGQKSSA 153
           KPLMDLSGWN+RCMDSG+MHHFVGADSSCISWG+AQ+GELGYGP GQKSSA
Sbjct: 330 KPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGLAQNGELGYGPTGQKSSA 380



 Score = 72.0 bits (175), Expect(2) = 1e-36
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +2

Query: 257 LEGMHVMSVACGYAHSIVVVDRTEAGERLDQLDVYDGKAAGEGS 388
           LEGMHV+SVACG  HS+V+VDR    +RLDQLD+YDGKA GEG+
Sbjct: 388 LEGMHVISVACGMGHSMVIVDRANVADRLDQLDIYDGKAVGEGN 431


>ref|XP_002278592.1| PREDICTED: protein RCC2 homolog [Vitis vinifera]
          Length = 548

 Score = 99.0 bits (245), Expect(2) = 6e-36
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +1

Query: 1   KPLMDLSGWNIRCMDSGSMHHFVGADSSCISWGVAQSGELGYGPLGQKSSA 153
           KPLMDLSGW++ CMDSG+MHHFVGADSSCISWG AQ GELGYGP GQKSSA
Sbjct: 329 KPLMDLSGWHLNCMDSGNMHHFVGADSSCISWGHAQYGELGYGPNGQKSSA 379



 Score = 77.0 bits (188), Expect(2) = 6e-36
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = +2

Query: 257 LEGMHVMSVACGYAHSIVVVDRTEAGERLDQLDVYDGKAAGEGS 388
           LEGMHV++VACG+ +S+VVVDRT  G+RLDQLD+YDGKAAGEGS
Sbjct: 387 LEGMHVITVACGFGNSMVVVDRTNVGDRLDQLDIYDGKAAGEGS 430


>emb|CBI19816.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score = 99.0 bits (245), Expect(2) = 6e-36
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +1

Query: 1   KPLMDLSGWNIRCMDSGSMHHFVGADSSCISWGVAQSGELGYGPLGQKSSA 153
           KPLMDLSGW++ CMDSG+MHHFVGADSSCISWG AQ GELGYGP GQKSSA
Sbjct: 323 KPLMDLSGWHLNCMDSGNMHHFVGADSSCISWGHAQYGELGYGPNGQKSSA 373



 Score = 77.0 bits (188), Expect(2) = 6e-36
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = +2

Query: 257 LEGMHVMSVACGYAHSIVVVDRTEAGERLDQLDVYDGKAAGEGS 388
           LEGMHV++VACG+ +S+VVVDRT  G+RLDQLD+YDGKAAGEGS
Sbjct: 381 LEGMHVITVACGFGNSMVVVDRTNVGDRLDQLDIYDGKAAGEGS 424


>ref|XP_003523611.1| PREDICTED: protein RCC2-like [Glycine max]
          Length = 538

 Score =  102 bits (253), Expect(2) = 2e-35
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = +1

Query: 1   KPLMDLSGWNIRCMDSGSMHHFVGADSSCISWGVAQSGELGYGPLGQKSSA 153
           KPLMDLSGWN+ CMDSG+MHHFVGADSSCISWG AQ+GELGYGP GQKSSA
Sbjct: 325 KPLMDLSGWNLLCMDSGNMHHFVGADSSCISWGHAQNGELGYGPTGQKSSA 375



 Score = 72.0 bits (175), Expect(2) = 2e-35
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +2

Query: 257 LEGMHVMSVACGYAHSIVVVDRTEAGERLDQLDVYDGKAAGEGS 388
           LEGMHV+SVACG  HS+V+VDR    +RLDQLD+YDGKA GEG+
Sbjct: 383 LEGMHVISVACGMGHSMVIVDRANVADRLDQLDIYDGKAVGEGN 426


>ref|XP_002301995.1| predicted protein [Populus trichocarpa] gi|222843721|gb|EEE81268.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score =  103 bits (256), Expect(2) = 8e-35
 Identities = 45/51 (88%), Positives = 49/51 (96%)
 Frame = +1

Query: 1   KPLMDLSGWNIRCMDSGSMHHFVGADSSCISWGVAQSGELGYGPLGQKSSA 153
           KPLMDLSGWN+RCMDSG+MHHFVGAD+SCISWG AQ+GELGYGP GQKSSA
Sbjct: 324 KPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGHAQNGELGYGPSGQKSSA 374



 Score = 68.9 bits (167), Expect(2) = 8e-35
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +2

Query: 257 LEGMHVMSVACGYAHSIVVVDRTEAGERLDQLDVYDGKAAGE 382
           LEGMHV+ VACG  HS+V+VDR   G++LDQLDVYDGKA+GE
Sbjct: 382 LEGMHVIGVACGMGHSMVIVDRMNVGDQLDQLDVYDGKASGE 423


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