BLASTX nr result

ID: Bupleurum21_contig00009564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009564
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322662.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002336999.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002322661.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002322662.1| predicted protein [Populus trichocarpa]
           gi|224139810|ref|XP_002323287.1| predicted protein
           [Populus trichocarpa] gi|222867292|gb|EEF04423.1|
           predicted protein [Populus trichocarpa]
           gi|222867917|gb|EEF05048.1| predicted protein [Populus
           trichocarpa]
          Length = 197

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
 Frame = -2

Query: 484 FWIHKSCADAPASFQFQFHDKHXXXXXXXXXXXQVYKFKQYCRFCNKTLTPEYWLYYCPK 305
           F +HK C   P + +   H  H            +   K++C  C + +  EY +YYCP 
Sbjct: 9   FVVHKKCISLPRTLKTVLHH-HPQIIHTYHPQQCIKSIKKHCGICCREVDTEYGVYYCPD 67

Query: 304 CRFFAHFHCARSNEKIRLIEDEIIYDSEVVHLPAADESSADQLAEQFVMAMSTVI----- 140
           C F AH +C+       L   EI+ ++E        E  +  + +QF++    V+     
Sbjct: 68  CDFVAHVNCSIEYGDSTL--TEIVEENE--------EEQSVTVDDQFMVPSFRVVREIRE 117

Query: 139 --TTNCFRHPAHNQHDLQLMTINEYLNINQKHDDEALLLLCDGCVKPI 2
                  +H +H QH+L L         N K DD+   L CDGC+ PI
Sbjct: 118 ERIIEEIKHLSH-QHNLIL---------NDKVDDD---LKCDGCMLPI 152


>ref|XP_002336999.1| predicted protein [Populus trichocarpa] gi|222837546|gb|EEE75911.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/159 (22%), Positives = 57/159 (35%)
 Frame = -2

Query: 478 IHKSCADAPASFQFQFHDKHXXXXXXXXXXXQVYKFKQYCRFCNKTLTPEYWLYYCPKCR 299
           +H+ C   P + +   H  H            +    +YC  C + +  EY +YYCP C 
Sbjct: 83  VHEECISLPGTLKTALHH-HPRIIHTYHPQQCIESINKYCGICCREVDTEYGVYYCPDCD 141

Query: 298 FFAHFHCARSNEKIRLIEDEIIYDSEVVHLPAADESSADQLAEQFVMAMSTVITTNCFRH 119
           F AH +C+R             Y          +E       +   M  S  +       
Sbjct: 142 FVAHVNCSRE------------YGDSATETGGENEEEQSVTVDDQFMEPSFRVVREIKHG 189

Query: 118 PAHNQHDLQLMTINEYLNINQKHDDEALLLLCDGCVKPI 2
                 +++  +    L +N K DD+   L CDGC+ PI
Sbjct: 190 EERIIEEIEHFSHQHNLILNDKVDDD---LKCDGCMLPI 225


>ref|XP_002322661.1| predicted protein [Populus trichocarpa] gi|222867291|gb|EEF04422.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 2/161 (1%)
 Frame = -2

Query: 478 IHKSCADAPASFQFQFHDKHXXXXXXXXXXXQVYKFKQYCRFCNKTLTPEYWLYYCPKCR 299
           +HK C   P + +   H  H           ++    +YC  C + +  EY +YYCP C 
Sbjct: 281 VHKKCISLPRTLKTALHH-HPRIIHTYHPQQRIESINKYCGICCREVDTEYGVYYCPDCD 339

Query: 298 FFAHFHCA--RSNEKIRLIEDEIIYDSEVVHLPAADESSADQLAEQFVMAMSTVITTNCF 125
           F AH +C+    +   +++E+     S  V+    + S    +  +       +I     
Sbjct: 340 FVAHVNCSIEYGDSATKIVEENEEEQSVTVYDQFMEPSLC--VVREIKHGEERIIEE--I 395

Query: 124 RHPAHNQHDLQLMTINEYLNINQKHDDEALLLLCDGCVKPI 2
           +H +H QH+L L+          K DD+   L CDGC+ PI
Sbjct: 396 KHFSH-QHNLILI---------DKVDDD---LKCDGCMLPI 423


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