BLASTX nr result

ID: Bupleurum21_contig00009556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009556
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523710.1| transferase, putative [Ricinus communis] gi|...    68   7e-10
ref|XP_002275679.1| PREDICTED: probable glucuronoxylan glucurono...    64   1e-08
gb|AFK36383.1| unknown [Medicago truncatula]                           60   2e-07
ref|XP_003538175.1| PREDICTED: probable glucuronoxylan glucurono...    60   2e-07
ref|XP_003539434.1| PREDICTED: probable glucuronoxylan glucurono...    59   3e-07

>ref|XP_002523710.1| transferase, putative [Ricinus communis]
           gi|223537014|gb|EEF38650.1| transferase, putative
           [Ricinus communis]
          Length = 461

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/68 (44%), Positives = 43/68 (63%)
 Frame = -3

Query: 217 MVEFIKKASRKNRGFIVKMRFLHNKRHQSEKTTTPTMFWYRYFKWLLWFSLSAYFFTSFL 38
           M E IK  +RKNRGF VKM+ +H      ++    +   ++Y+KW+LW SLS YF TS+ 
Sbjct: 1   MAELIKP-TRKNRGFYVKMKLVHRNGRLQQQQLEKSNLCFKYYKWVLWISLSLYFITSYF 59

Query: 37  ITHSPNPI 14
           I+H P P+
Sbjct: 60  ISHKPIPL 67


>ref|XP_002275679.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7
           [Vitis vinifera] gi|297734915|emb|CBI17149.3| unnamed
           protein product [Vitis vinifera]
          Length = 460

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = -3

Query: 217 MVEFIKKASRKNRGFIVKMRFLHNKRHQSEKTTTPTMFWYRYFKWLLWFSLSAYFFTSFL 38
           MV+F + +  +NRGF V+MR LH +  Q +       + +RYF+W+LW SLS YFF+S+L
Sbjct: 1   MVDFSRPS--RNRGFYVRMRLLHKQGRQEKS------YCFRYFRWVLWLSLSLYFFSSYL 52

Query: 37  ITHSPNPI 14
           IT+ P  +
Sbjct: 53  ITNHPRKL 60


>gb|AFK36383.1| unknown [Medicago truncatula]
          Length = 316

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
 Frame = -3

Query: 202 KKASRKNRGFIVKMRFLHN---KRHQSEKTTTPTMFWYRYFKWLLWFSLSAYFFTSFLIT 32
           KK   KN+G+ VKM+ +H    +  Q EK       +++Y+KW+LW SLS YFFTS+LI+
Sbjct: 6   KKKPSKNKGYYVKMKLMHKHGIRPQQQEKN-----HFHKYYKWILWLSLSLYFFTSYLIS 60

Query: 31  HSPN 20
           ++ N
Sbjct: 61  NNNN 64


>ref|XP_003538175.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Glycine max]
          Length = 460

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 8/69 (11%)
 Frame = -3

Query: 202 KKASRKNRGFIVKMRFL--------HNKRHQSEKTTTPTMFWYRYFKWLLWFSLSAYFFT 47
           +K    +RG+ VKM+ L        H+  HQ EK       +YRY+KW+LW SLS YFFT
Sbjct: 4   QKRPPNSRGYYVKMKLLQKHGRPHHHHHHHQQEKNC-----FYRYYKWVLWLSLSLYFFT 58

Query: 46  SFLITHSPN 20
           S+LI+++ N
Sbjct: 59  SYLISNNNN 67


>ref|XP_003539434.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase
           IRX7-like [Glycine max]
          Length = 459

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/67 (43%), Positives = 44/67 (65%)
 Frame = -3

Query: 202 KKASRKNRGFIVKMRFLHNKRHQSEKTTTPTMFWYRYFKWLLWFSLSAYFFTSFLITHSP 23
           +K   ++R F V+M+ LH + ++ ++      F + Y+KW+LWFS S YFFTS+LIT +P
Sbjct: 4   QKKPPQSRVFYVRMKLLHKQGNKPQQDKNNNCF-HTYYKWVLWFSFSLYFFTSYLITSNP 62

Query: 22  NPIKPTS 2
           N   PTS
Sbjct: 63  NN-TPTS 68


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