BLASTX nr result

ID: Bupleurum21_contig00009541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009541
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...   162   3e-38
emb|CBI15934.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arab...   142   4e-32
emb|CBI15935.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score =  162 bits (409), Expect = 3e-38
 Identities = 72/119 (60%), Positives = 92/119 (77%), Gaps = 3/119 (2%)
 Frame = -1

Query: 350  KTTRDGIKCSCCQEIFTPSNFQFHAIGTHHQPSAHIYLEDGRSLLECQMQLRHDKISRGS 171
            + TRDGIKCSCCQE+F+ S F+ HA  ++H+ +A+I+LEDGRSLLECQMQ+  D   +G 
Sbjct: 844  RITRDGIKCSCCQEVFSLSRFEAHAGSSYHRSAANIFLEDGRSLLECQMQIIRDITGKGF 903

Query: 170  TKESKVMKKRRKR---NDNICAICHFGGELLLCDQCPSSFHTRCLGLKKAPDGDWFCRS 3
            TKES   KK  +R   ND+IC++CH+GG+L+LCD CPSSFH  CLGLK  P+GDWFC S
Sbjct: 904  TKESFSRKKSNERHHENDHICSVCHYGGDLVLCDHCPSSFHKSCLGLKTLPEGDWFCPS 962


>emb|CBI15934.3| unnamed protein product [Vitis vinifera]
          Length = 994

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/119 (59%), Positives = 90/119 (75%), Gaps = 3/119 (2%)
 Frame = -1

Query: 350 KTTRDGIKCSCCQEIFTPSNFQFHAIGTHHQPSAHIYLEDGRSLLECQMQLRHDKISRGS 171
           + TRDGIKCSCCQE+F+ S F+ HA  ++H+ +A+I+LEDGRSLLECQMQ+  D   +G 
Sbjct: 589 RITRDGIKCSCCQEVFSLSRFEAHAGSSYHRSAANIFLEDGRSLLECQMQIIRDITGKGF 648

Query: 170 TKESKVMKKRRKR---NDNICAICHFGGELLLCDQCPSSFHTRCLGLKKAPDGDWFCRS 3
           TKES   KK  +R   ND+IC++CH+GG+L+LCD CPSSFH  CLGLK    GDWFC S
Sbjct: 649 TKESFSRKKSNERHHENDHICSVCHYGGDLVLCDHCPSSFHKSCLGLKVGCFGDWFCPS 707


>ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arabidopsis lyrata subsp.
           lyrata] gi|297312116|gb|EFH42540.1| hypothetical protein
           ARALYDRAFT_358079 [Arabidopsis lyrata subsp. lyrata]
          Length = 1047

 Score =  142 bits (357), Expect = 4e-32
 Identities = 62/116 (53%), Positives = 85/116 (73%)
 Frame = -1

Query: 350 KTTRDGIKCSCCQEIFTPSNFQFHAIGTHHQPSAHIYLEDGRSLLECQMQLRHDKISRGS 171
           K TR+GIKCSCC+ IFT S F+ HA G   + +A+I+L+DGRSLLECQ++  ++   +  
Sbjct: 630 KLTREGIKCSCCRRIFTISGFEVHANGGSCRAAANIFLDDGRSLLECQVEA-YETRKKAQ 688

Query: 170 TKESKVMKKRRKRNDNICAICHFGGELLLCDQCPSSFHTRCLGLKKAPDGDWFCRS 3
             +   MK R+  ND IC++CH+GG+L+LCD CPS+FH  CLGL++ PDGDWFC S
Sbjct: 689 PPDILKMKLRQGENDVICSVCHYGGKLILCDGCPSAFHANCLGLEEVPDGDWFCES 744


>emb|CBI15935.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/119 (55%), Positives = 82/119 (68%), Gaps = 3/119 (2%)
 Frame = -1

Query: 350 KTTRDGIKCSCCQEIFTPSNFQFHAIGTHHQPSAHIYLEDGRSLLECQMQLRHDKISRGS 171
           K  RDGIK SCCQE+F+P  F+ HA  + HQ  A+I+LED  SLLE Q Q+ H    +  
Sbjct: 274 KIARDGIKNSCCQEVFSPRGFEAHAGSSFHQSDANIFLEDEGSLLEGQRQMVHRITGKSF 333

Query: 170 TKESKVMKKRRK---RNDNICAICHFGGELLLCDQCPSSFHTRCLGLKKAPDGDWFCRS 3
           TKES   KK       ND+IC++CH+GG+L+LCDQCPS FH  CLGLK+ P+GDWFC S
Sbjct: 334 TKESSHGKKSNGDQCNNDDICSVCHYGGDLVLCDQCPSCFHQSCLGLKELPEGDWFCPS 392


>ref|XP_002313990.1| predicted protein [Populus trichocarpa] gi|222850398|gb|EEE87945.1|
           predicted protein [Populus trichocarpa]
          Length = 978

 Score =  140 bits (353), Expect = 1e-31
 Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 11/127 (8%)
 Frame = -1

Query: 350 KTTRDGIKCSCCQEIFTPSNFQFHA--------IGTHHQPSAHIYLEDGRSLLECQMQLR 195
           +  RDGIKCSCC +++T S F+ HA           + +P+A I+L+DGRSLLECQ+Q+ 
Sbjct: 614 RIARDGIKCSCCGKVYTLSGFELHAGIKSCRSGASKYCKPAASIFLDDGRSLLECQIQMM 673

Query: 194 HDKIS---RGSTKESKVMKKRRKRNDNICAICHFGGELLLCDQCPSSFHTRCLGLKKAPD 24
            DK     +  T +S      R  ND++C++CH+GGEL+LCD CPSSFH RCLG+K  PD
Sbjct: 674 RDKEMSNHKAETPDSLKGSWDRDGNDHVCSVCHYGGELILCDHCPSSFHKRCLGMKDVPD 733

Query: 23  GDWFCRS 3
           GDWFC S
Sbjct: 734 GDWFCPS 740


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