BLASTX nr result

ID: Bupleurum21_contig00009527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009527
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311250.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81
ref|XP_002316186.1| predicted protein [Populus trichocarpa] gi|2...   297   3e-78
ref|XP_002278151.2| PREDICTED: biotin carboxyl carrier protein o...   291   2e-76
ref|XP_002520803.1| Biotin carboxyl carrier protein of acetyl-Co...   269   8e-70
gb|ACU19863.1| unknown [Glycine max]                                  261   2e-67

>ref|XP_002311250.1| predicted protein [Populus trichocarpa] gi|222851070|gb|EEE88617.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score =  308 bits (790), Expect = 1e-81
 Identities = 163/240 (67%), Positives = 180/240 (75%), Gaps = 1/240 (0%)
 Frame = +1

Query: 67  QGLTVGRNLCASPLKRETKVITCVKTSERAAIAKSDDSCSQGSAEKSSLRGATFPSGFEA 246
           QGLTVGR L + P KR  ++++CVKTSE  AIAKSDD   QGS EK+SLR ATFP+GFEA
Sbjct: 19  QGLTVGRKLISYPSKRNLRLVSCVKTSEAPAIAKSDDGNKQGSLEKNSLRNATFPNGFEA 78

Query: 247 LVKEVCDETQIAELKLKIGDFEMHLKRNI-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 423
           LV EVCDET+IAELKLK+GDFEMHLKRN+                               
Sbjct: 79  LVLEVCDETEIAELKLKVGDFEMHLKRNVGAAKAPLISSTPLPPIPTPPMEVSAAVSPSP 138

Query: 424 XXXXXXXGKTNPFTNVPVDKSRKLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQPPS 603
                   KT PFTNV   KS KLAALEASGASGYVLVASPTVGSFR+ RT+KGKKQPP 
Sbjct: 139 SPSKSSVEKTTPFTNVSFGKSSKLAALEASGASGYVLVASPTVGSFRRNRTVKGKKQPPI 198

Query: 604 CKEGDLIKEGQVIGFLDQFGTELPVKSDVAGEVLKVLFDDGEAVGYGDPLIAVLPSFHGI 783
           CKEGD+IKEGQVIG+LDQFGTELPVKSDVAGEVLK+LF+DG+AVGYGDPLIAVLPSFHGI
Sbjct: 199 CKEGDVIKEGQVIGYLDQFGTELPVKSDVAGEVLKLLFNDGDAVGYGDPLIAVLPSFHGI 258


>ref|XP_002316186.1| predicted protein [Populus trichocarpa] gi|222865226|gb|EEF02357.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  297 bits (760), Expect = 3e-78
 Identities = 155/242 (64%), Positives = 180/242 (74%), Gaps = 3/242 (1%)
 Frame = +1

Query: 67  QGLTVGRNLCASPLKRETKVITCVKTSERAAIAKSDDSCSQGSAEKSSLRGATFPSGFEA 246
           QGLTVGR L + P+KR+ ++++CVKTSE  AIAK+DDS  QGS EK+S R ATFP+GFEA
Sbjct: 8   QGLTVGRKLISYPVKRDRRLVSCVKTSEAPAIAKTDDSNKQGSLEKNSQRNATFPNGFEA 67

Query: 247 LVKEVCDETQIAELKLKIGDFEMHLKRNI---EXXXXXXXXXXXXXXXXXXXXXXXXXXX 417
           L+ +VCDET++AELKLK+GDFEMHLK+NI   +                           
Sbjct: 68  LILDVCDETEVAELKLKVGDFEMHLKQNIGVAKAPFTSSTPLSPPPIPTPPMELSAAVSP 127

Query: 418 XXXXXXXXXGKTNPFTNVPVDKSRKLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQP 597
                     KT PFTNV   KS KLA LEASGASGYVLVASPTVGSFR+ RT+KGKKQP
Sbjct: 128 APSPSKSSVEKTTPFTNVSFRKSSKLAVLEASGASGYVLVASPTVGSFRRNRTVKGKKQP 187

Query: 598 PSCKEGDLIKEGQVIGFLDQFGTELPVKSDVAGEVLKVLFDDGEAVGYGDPLIAVLPSFH 777
             CKEGD+IKEGQVIG+LDQFGTELPVKSDVAGEVLK+LF+DG+AVGYGDPL+AVLPSFH
Sbjct: 188 LICKEGDVIKEGQVIGYLDQFGTELPVKSDVAGEVLKLLFNDGDAVGYGDPLVAVLPSFH 247

Query: 778 GI 783
            I
Sbjct: 248 AI 249


>ref|XP_002278151.2| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase-like [Vitis vinifera]
           gi|297736542|emb|CBI25413.3| unnamed protein product
           [Vitis vinifera]
          Length = 288

 Score =  291 bits (744), Expect = 2e-76
 Identities = 157/280 (56%), Positives = 184/280 (65%), Gaps = 19/280 (6%)
 Frame = +1

Query: 1   RSFQYSVGTASN----------------TWYTSNKCPIQGLTVGRNLCASPLKRETKVIT 132
           RS  YSVG  SN                TW TSN   +QGLTVG  L +SP+K++  +I+
Sbjct: 8   RSVHYSVGAISNVRSFIERPTMVPMYNATWPTSNTLHVQGLTVGGKLISSPIKQKGTLIS 67

Query: 133 CVKTSERAAIAKSDDSCSQGSAEKSSLRGATFPSGFEALVKEVCDETQIAELKLKIGDFE 312
           CVKT E A  AK DD   QG  +K +L  ATFP+GFEAL+ EVCDET +AELKLK+GDFE
Sbjct: 68  CVKTPETAGTAKCDDGNPQGLLQKDTLPSATFPNGFEALILEVCDETDVAELKLKVGDFE 127

Query: 313 MHLKRNI---EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTNPFTNVPVDK 483
           MHL+RN+                                         K +PFT   ++K
Sbjct: 128 MHLRRNVGVTNPPMPVIAPTAPPTVSAKPPVESAPAAPPSLPPKPSQEKISPFTKSLLEK 187

Query: 484 SRKLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVIGFLDQFG 663
             KL ALEASGA+ YVLV+SPTVGSFR GRTLKGK+QPP CKEGD+IKEGQVIG+LDQFG
Sbjct: 188 PSKLRALEASGANAYVLVSSPTVGSFRTGRTLKGKRQPPVCKEGDVIKEGQVIGYLDQFG 247

Query: 664 TELPVKSDVAGEVLKVLFDDGEAVGYGDPLIAVLPSFHGI 783
           +ELPVKSD AGEVLKV+F+DGEAVGYGDPL+AVLPSFHGI
Sbjct: 248 SELPVKSDTAGEVLKVIFNDGEAVGYGDPLVAVLPSFHGI 287


>ref|XP_002520803.1| Biotin carboxyl carrier protein of acetyl-CoA carboxylase, putative
           [Ricinus communis] gi|223539934|gb|EEF41512.1| Biotin
           carboxyl carrier protein of acetyl-CoA carboxylase,
           putative [Ricinus communis]
          Length = 258

 Score =  269 bits (688), Expect = 8e-70
 Identities = 147/246 (59%), Positives = 172/246 (69%), Gaps = 6/246 (2%)
 Frame = +1

Query: 67  QGLTVGRNLCASP---LKRETKVITCVKTSERAAIAKSDDSCSQGSAEKSSLRGATFPSG 237
           Q LTVGR L +S    ++R    ++CVK  E  A AKSD   + G+ EK+  R ATFPSG
Sbjct: 15  QRLTVGRKLMSSSYPKMRRNVMSVSCVKAPEVGATAKSD--AADGAVEKTRPRTATFPSG 72

Query: 238 FEALVKEVCDETQIAELKLKIGDFEMHLKRNI---EXXXXXXXXXXXXXXXXXXXXXXXX 408
           FEAL+ EVCDET++AELKLK+GDFEMHL+RN+   +                        
Sbjct: 73  FEALMLEVCDETEVAELKLKVGDFEMHLRRNVGATKAPLSHISPIEPPPIPTKPMDVPAT 132

Query: 409 XXXXXXXXXXXXGKTNPFTNVPVDKSRKLAALEASGASGYVLVASPTVGSFRKGRTLKGK 588
                        K  PFTNV   KS KLAALEASGA+GYVLVASPTVGSFR+ R++KGK
Sbjct: 133 VAAPASPPKPSSEKATPFTNVSFGKSAKLAALEASGATGYVLVASPTVGSFRRNRSVKGK 192

Query: 589 KQPPSCKEGDLIKEGQVIGFLDQFGTELPVKSDVAGEVLKVLFDDGEAVGYGDPLIAVLP 768
           +QPP  KEGDLIKEGQVIG+LDQFGTELPVKSDVAGEVLK+LFDDG+AVGYGDPL+AVLP
Sbjct: 193 RQPPIFKEGDLIKEGQVIGYLDQFGTELPVKSDVAGEVLKLLFDDGDAVGYGDPLVAVLP 252

Query: 769 SFHGIR 786
           SFHGI+
Sbjct: 253 SFHGIQ 258


>gb|ACU19863.1| unknown [Glycine max]
          Length = 291

 Score =  261 bits (668), Expect = 2e-67
 Identities = 148/284 (52%), Positives = 179/284 (63%), Gaps = 22/284 (7%)
 Frame = +1

Query: 1   RSFQYSVGTASNT----------------WYTSNKCPIQGLTVGRNLCASPLKRETKVIT 132
           RSF Y +GT S+                 W + ++  IQ L  G+    S  K +  +I+
Sbjct: 8   RSFHYPIGTMSHVRASLEKQAVVPIHNAGWNSKSRLFIQHLAYGQKHINSHTKGKNTLIS 67

Query: 133 CVKTSERAAIAKSD---DSCSQGSAEKSSLRGATFPSGFEALVKEVCDETQIAELKLKIG 303
           C KT+E    +KSD   D+  QGS EK  L+ ATFP+GFEALV EVCDET+IAELK+K+G
Sbjct: 68  CGKTAEAINASKSDASSDNTPQGSLEKKPLQTATFPNGFEALVLEVCDETEIAELKVKVG 127

Query: 304 DFEMHLKRNI---EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTNPFTNVP 474
           DFEMH+KRNI   +                                     K NPF NV 
Sbjct: 128 DFEMHIKRNIGATKVPLSNISPTTPPPIPSKPMDESAPGSLPPSPPKSSPEKNNPFANVS 187

Query: 475 VDKSRKLAALEASGASGYVLVASPTVGSFRKGRTLKGKKQPPSCKEGDLIKEGQVIGFLD 654
            +KS +LAALEASG + YVLV+SPTVG FR+GRT+KGKKQPP CKEGD+IKEGQVIG+LD
Sbjct: 188 KEKSPRLAALEASGTNTYVLVSSPTVGLFRRGRTVKGKKQPPICKEGDVIKEGQVIGYLD 247

Query: 655 QFGTELPVKSDVAGEVLKVLFDDGEAVGYGDPLIAVLPSFHGIR 786
           QFGT LP+KSDVAGEVLK+L +DGE VGYGDPLIAVL SFH I+
Sbjct: 248 QFGTGLPIKSDVAGEVLKLLVEDGEPVGYGDPLIAVLSSFHDIK 291


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