BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009524
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]   237   8e-61
sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, ch...   236   1e-60
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop...   234   4e-60
ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus ...   226   1e-57
gb|AFN53661.1| 50S ribosomal protein [Linum usitatissimum]            221   5e-56

>emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
          Length = 306

 Score =  237 bits (604), Expect = 8e-61
 Identities = 119/159 (74%), Positives = 136/159 (85%)
 Frame = -1

Query: 477 RRGTASTLTRADVRGGGKKPYPQKKTGRARQGSRRTPLRXXXXXXXXXXXKDWSVKINKK 298
           RRGTASTLTR +VRGGGKKPYPQKKTGRAR+GS+RTPLR           +DWS+KIN+K
Sbjct: 94  RRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTPLRPGGGVVFGPKPRDWSIKINRK 153

Query: 297 EKKLAISTALASALDNGIVVEEFDDKFEKPKTKDFIALLNRLGIDPCEKSMFLMTDVSDN 118
           EK+LAISTA++SA  N IVVE+F DKF+KPKTK+FI+ + R GIDP EKSMFLMT+VSDN
Sbjct: 154 EKRLAISTAMSSAAVNTIVVEDFSDKFDKPKTKEFISAMKRWGIDPKEKSMFLMTEVSDN 213

Query: 117 VRLSSRNIGTLKMLTPRTLNLFDILNSDKLVFTKGAVEY 1
           VRLSSRNIGTLKMLTPRTLNLFDILNSDKLV T+  V+Y
Sbjct: 214 VRLSSRNIGTLKMLTPRTLNLFDILNSDKLVLTQETVDY 252


>sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, chloroplastic; AltName:
           Full=CL4; AltName: Full=R-protein L4; Flags: Precursor
           gi|3298439|dbj|BAA31510.1| chloroplast ribosomal protein
           L4 [Nicotiana tabacum]
          Length = 282

 Score =  236 bits (603), Expect = 1e-60
 Identities = 122/159 (76%), Positives = 137/159 (86%)
 Frame = -1

Query: 477 RRGTASTLTRADVRGGGKKPYPQKKTGRARQGSRRTPLRXXXXXXXXXXXKDWSVKINKK 298
           RRGTASTLTR++VRGGG KPYPQKKTGRAR+GS RTPLR           KDWSVKINKK
Sbjct: 89  RRGTASTLTRSEVRGGGIKPYPQKKTGRARRGSNRTPLRPGGGVVFGPKPKDWSVKINKK 148

Query: 297 EKKLAISTALASALDNGIVVEEFDDKFEKPKTKDFIALLNRLGIDPCEKSMFLMTDVSDN 118
           EK+LAISTAL+SA +N IVVEEF+DKFEKPKTK+FI L+ R G+DP EKS+FLMTDVSDN
Sbjct: 149 EKRLAISTALSSASENTIVVEEFNDKFEKPKTKEFIDLMRRWGLDPKEKSLFLMTDVSDN 208

Query: 117 VRLSSRNIGTLKMLTPRTLNLFDILNSDKLVFTKGAVEY 1
           V LSSRNIGTLKMLTPRTLNLFDIL+S+KLV TK AV++
Sbjct: 209 VILSSRNIGTLKMLTPRTLNLFDILDSEKLVLTKSAVDF 247


>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
           sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
           ribosomal protein L4, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  234 bits (598), Expect = 4e-60
 Identities = 122/159 (76%), Positives = 134/159 (84%)
 Frame = -1

Query: 477 RRGTASTLTRADVRGGGKKPYPQKKTGRARQGSRRTPLRXXXXXXXXXXXKDWSVKINKK 298
           RRGTASTLTRA+V GGGKKPY QKKTGRAR+GS RTPLR           +DWS+KIN+K
Sbjct: 95  RRGTASTLTRAEVSGGGKKPYKQKKTGRARRGSMRTPLRPGGGVVFGPKPRDWSIKINRK 154

Query: 297 EKKLAISTALASALDNGIVVEEFDDKFEKPKTKDFIALLNRLGIDPCEKSMFLMTDVSDN 118
           EKKLAISTA+ASA  N IVVEEF DKFEKPKTK+FIA L R GIDP EKS+FLMT+VSDN
Sbjct: 155 EKKLAISTAVASAAVNTIVVEEFGDKFEKPKTKEFIAALKRWGIDPKEKSLFLMTEVSDN 214

Query: 117 VRLSSRNIGTLKMLTPRTLNLFDILNSDKLVFTKGAVEY 1
           VRLSSRNIGTLK+LTPRTLNLFDIL+SDKLV T  AV+Y
Sbjct: 215 VRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPTAVDY 253


>ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus communis]
           gi|223535036|gb|EEF36718.1| 50S ribosomal protein L4,
           putative [Ricinus communis]
          Length = 283

 Score =  226 bits (576), Expect = 1e-57
 Identities = 116/159 (72%), Positives = 130/159 (81%)
 Frame = -1

Query: 477 RRGTASTLTRADVRGGGKKPYPQKKTGRARQGSRRTPLRXXXXXXXXXXXKDWSVKINKK 298
           RRGTASTLTRA+VRGGGKKPY QKKTGRAR+GS RTPLR           +DWS+KINKK
Sbjct: 95  RRGTASTLTRAEVRGGGKKPYQQKKTGRARRGSSRTPLRPGGGVIFGPKPRDWSIKINKK 154

Query: 297 EKKLAISTALASALDNGIVVEEFDDKFEKPKTKDFIALLNRLGIDPCEKSMFLMTDVSDN 118
           EK+LAISTAL SA ++ + VEEF DKFEKPKTKDFI  + R G+DP EK MFLM DV+D+
Sbjct: 155 EKRLAISTALCSATESMLCVEEFGDKFEKPKTKDFIEAMKRWGLDPKEKVMFLMMDVADS 214

Query: 117 VRLSSRNIGTLKMLTPRTLNLFDILNSDKLVFTKGAVEY 1
           V LSSRNIGTL+MLTPRTLNLFDILNSDKLV T  AV+Y
Sbjct: 215 VGLSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPDAVDY 253


>gb|AFN53661.1| 50S ribosomal protein [Linum usitatissimum]
          Length = 294

 Score =  221 bits (563), Expect = 5e-56
 Identities = 113/159 (71%), Positives = 130/159 (81%)
 Frame = -1

Query: 477 RRGTASTLTRADVRGGGKKPYPQKKTGRARQGSRRTPLRXXXXXXXXXXXKDWSVKINKK 298
           RRGTASTLTR++VRGGGKKPYPQK TGRAR+GS RTPLR           KDWS+KIN+K
Sbjct: 95  RRGTASTLTRSEVRGGGKKPYPQKSTGRARRGSMRTPLRPGGGVIFGPRPKDWSIKINRK 154

Query: 297 EKKLAISTALASALDNGIVVEEFDDKFEKPKTKDFIALLNRLGIDPCEKSMFLMTDVSDN 118
           EK+LA+STALASA ++ I VEEF ++FEKP+TKDFIA + R G+DP EK MFLM DV+DN
Sbjct: 155 EKQLAMSTALASAAESMICVEEFGEEFEKPRTKDFIAAMARWGLDPKEKVMFLMMDVNDN 214

Query: 117 VRLSSRNIGTLKMLTPRTLNLFDILNSDKLVFTKGAVEY 1
           V LS RNIGTLKMLTPRTLNLFDILNSDKLV T   V++
Sbjct: 215 VGLSGRNIGTLKMLTPRTLNLFDILNSDKLVLTPDTVDF 253