BLASTX nr result

ID: Bupleurum21_contig00009518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009518
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263...   107   5e-21
emb|CBI32173.3| unnamed protein product [Vitis vinifera]              105   3e-20
ref|XP_002330891.1| bromodomain protein [Populus trichocarpa] gi...   102   2e-19
ref|XP_003532866.1| PREDICTED: uncharacterized protein LOC100811...   100   9e-19
ref|XP_003595781.1| Bromodomain protein [Medicago truncatula] gi...    97   6e-18

>ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263099 [Vitis vinifera]
            gi|147768907|emb|CAN75881.1| hypothetical protein
            VITISV_024454 [Vitis vinifera]
          Length = 686

 Score =  107 bits (268), Expect = 5e-21
 Identities = 65/163 (39%), Positives = 87/163 (53%), Gaps = 16/163 (9%)
 Frame = -3

Query: 1084 WTTWEDLLLSSAVKRYGLSDWSTVAMELQSRASI-QTQFTAQICQNKFHDLKRRFDVSAA 908
            WTTWE+LLL+ AVKR+G  +W +VAME+Q+R+S+     TAQ CQ K+HDLKRRF  +A 
Sbjct: 32   WTTWEELLLACAVKRHGFQNWDSVAMEIQTRSSLPHLLTTAQNCQQKYHDLKRRFTATAK 91

Query: 907  GEDA----------GDTTVPWLDELKKLRIAELREIVEGRGASIQNXXXXXXXXXXXXXX 758
              DA             T+PWL+EL+KLR+AELR  V     SI +              
Sbjct: 92   DNDAETQSQNQVRDETDTIPWLEELRKLRVAELRNEVHRSDVSILSLQLKVKRLEEEREQ 151

Query: 757  XXXXEDGNREEKPDLEKDKSENETHDVVR-----PAKDENDGE 644
                 D N   KPDL+ +  E  + D V+     P K   +G+
Sbjct: 152  STKEND-NDVVKPDLDDEVKEERSKDEVKEGDEVPEKSSPEGD 193



 Score = 83.6 bits (205), Expect = 9e-14
 Identities = 57/159 (35%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
 Frame = -2

Query: 476 VEIKTMTNEPVRTGSVKIND-DAEGKPVQADSWNDSSKQSEEKRAENESAKMRDSVAAES 300
           VE      EP   GS K +   ++ KPV  DS+N SS+ +  K+A+ +S+++R+S A   
Sbjct: 227 VEEAAREPEPTEPGSTKPDPVSSDSKPVGEDSYNGSSEPNRAKKAD-DSSELRESAAHSK 285

Query: 299 KGGKDSNEAXXXXXXXXXXXXXXXXXXXXXXXXXXGDEQVASESLAKTTSRDSVKNSEPL 120
            G K+S++                             ++  +E+++  T R  VK S+PL
Sbjct: 286 DGTKESSDVQSSASLTRKRKRRRKKEISGSSSG----DEPETEAVSPATKRICVK-SQPL 340

Query: 119 NRFLHSIRSSKYGSVFEVRLQSQNTEKYKSIIRQHVDLE 3
             FL  IRS K+ S+FE RL++Q TE YKSI+RQHVDLE
Sbjct: 341 VSFLEIIRSHKHSSLFERRLETQETEVYKSIVRQHVDLE 379


>emb|CBI32173.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  105 bits (261), Expect = 3e-20
 Identities = 61/146 (41%), Positives = 80/146 (54%), Gaps = 11/146 (7%)
 Frame = -3

Query: 1084 WTTWEDLLLSSAVKRYGLSDWSTVAMELQSRASI-QTQFTAQICQNKFHDLKRRFDVSAA 908
            WTTWE+LLL+ AVKR+G  +W +VAME+Q+R+S+     TAQ CQ K+HDLKRRF  +A 
Sbjct: 32   WTTWEELLLACAVKRHGFQNWDSVAMEIQTRSSLPHLLTTAQNCQQKYHDLKRRFTATAK 91

Query: 907  GEDA----------GDTTVPWLDELKKLRIAELREIVEGRGASIQNXXXXXXXXXXXXXX 758
              DA             T+PWL+EL+KLR+AELR  V     SI +              
Sbjct: 92   DNDAETQSQNQVRDETDTIPWLEELRKLRVAELRNEVHRSDVSILSLQLKVKRLEEEREQ 151

Query: 757  XXXXEDGNREEKPDLEKDKSENETHD 680
                 D N   KPDL+ +  E  + D
Sbjct: 152  STKEND-NDVVKPDLDDEVKEERSKD 176



 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 52/158 (32%), Positives = 72/158 (45%)
 Frame = -2

Query: 476 VEIKTMTNEPVRTGSVKINDDAEGKPVQADSWNDSSKQSEEKRAENESAKMRDSVAAESK 297
           +++K    E  R  S K ND+   KP   D   +   + EE   EN S    +S   +  
Sbjct: 138 LQLKVKRLEEEREQSTKENDNDVVKPDLDDEVKEERSKDEESDRENRSVNESNSTGVK-- 195

Query: 296 GGKDSNEAXXXXXXXXXXXXXXXXXXXXXXXXXXGDEQVASESLAKTTSRDSVKNSEPLN 117
            G++   A                          G+++  S +    T R  VK S+PL 
Sbjct: 196 -GENIETAVEEAAREPEPTEPVKRIGGSLKGRDKGEQRPVSPA----TKRICVK-SQPLV 249

Query: 116 RFLHSIRSSKYGSVFEVRLQSQNTEKYKSIIRQHVDLE 3
            FL  IRS K+ S+FE RL++Q TE YKSI+RQHVDLE
Sbjct: 250 SFLEIIRSHKHSSLFERRLETQETEVYKSIVRQHVDLE 287


>ref|XP_002330891.1| bromodomain protein [Populus trichocarpa] gi|222872713|gb|EEF09844.1|
            bromodomain protein [Populus trichocarpa]
          Length = 643

 Score =  102 bits (254), Expect = 2e-19
 Identities = 63/164 (38%), Positives = 86/164 (52%), Gaps = 25/164 (15%)
 Frame = -3

Query: 1105 HNQSQSPWTTWEDLLLSSAVKRYGLSDWSTVAMELQSRASI-QTQFTAQICQNKFHDLKR 929
            H+Q+Q  W TWE+LLL+SAVKR+G  +W +VA+ELQ++  +     TAQICQ K+ DL R
Sbjct: 9    HHQNQQSWGTWEELLLASAVKRHGFKNWDSVALELQTKTCLPHLLTTAQICQQKYLDLNR 68

Query: 928  RFDVSAAG---------EDAGD---------------TTVPWLDELKKLRIAELREIVEG 821
            RF+ +            ED  D                +VPWL+EL+KLR+AEL++ V+ 
Sbjct: 69   RFNTTTINNLHHNHTPEEDNQDEEQNNINTDIINNNIVSVPWLEELRKLRVAELKQEVQR 128

Query: 820  RGASIQNXXXXXXXXXXXXXXXXXXEDGNREEKPDLEKDKSENE 689
               SI                     DGN  EKPDL+ D+  NE
Sbjct: 129  YDVSILTLQLKVKKLEEEREISVQEGDGN-TEKPDLKADRLINE 171


>ref|XP_003532866.1| PREDICTED: uncharacterized protein LOC100811021 [Glycine max]
          Length = 747

 Score =  100 bits (248), Expect = 9e-19
 Identities = 67/176 (38%), Positives = 87/176 (49%), Gaps = 18/176 (10%)
 Frame = -3

Query: 1114 NEQHNQSQ---SPWTTWEDLLLSSAVKRYGLSDWSTVAMELQSRASIQTQFTAQICQNKF 944
            N +H Q Q     W TWE+LLL+ AV R+G +DW  VAME+QSR + +   TA+ C+ KF
Sbjct: 20   NHRHQQQQHRNEAWGTWEELLLACAVNRHGFTDWDAVAMEVQSRTT-RLLATARHCEQKF 78

Query: 943  HDLKRRFDVSA----------AGEDAGDTTVPWLDELKKLRIAELREIVEGRGASIQNXX 794
            HDL RRF V                A    VPWLDEL+KLR+AELR  V+    SI +  
Sbjct: 79   HDLSRRFAVQCNDDVPPPRQNGAAAAISDHVPWLDELRKLRVAELRRDVQRSDVSILSLQ 138

Query: 793  XXXXXXXXXXXXXXXXEDGNREEKPDLEKDKSENETHDV-----VRPAKDENDGEV 641
                                 EE+   EKD  ++E  D+     +RP  D+  GEV
Sbjct: 139  LEVK---------------RLEEEKAQEKDLKDDEKPDLAVSGELRPENDKTGGEV 179


>ref|XP_003595781.1| Bromodomain protein [Medicago truncatula]
            gi|357451019|ref|XP_003595786.1| Bromodomain protein
            [Medicago truncatula] gi|355484829|gb|AES66032.1|
            Bromodomain protein [Medicago truncatula]
            gi|355484834|gb|AES66037.1| Bromodomain protein [Medicago
            truncatula]
          Length = 719

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 58/127 (45%), Positives = 73/127 (57%), Gaps = 12/127 (9%)
 Frame = -3

Query: 1150 DKREEQN*MSTKNEQHNQSQSPWTTWEDLLLSSAVKRYGLSDWSTVAMELQSRASIQTQF 971
            D    QN    +N+  NQ    W TWE+LLL+SAV R+G  DW T+AME+QSR +  +  
Sbjct: 3    DMENHQN----QNKNPNQDLQGWGTWEELLLASAVDRHGFKDWDTIAMEVQSRTNRTSLL 58

Query: 970  -TAQICQNKFHDLKRRF-----------DVSAAGEDAGDTTVPWLDELKKLRIAELREIV 827
             TA  C+ KFHDL RRF           DVSA   +  D  VPWLD+L+K R+AELR  V
Sbjct: 59   ATAHHCEQKFHDLNRRFKDDVPPPQQNGDVSAVTAEDSD-HVPWLDKLRKQRVAELRRDV 117

Query: 826  EGRGASI 806
            +    SI
Sbjct: 118  QLSDVSI 124


Top