BLASTX nr result

ID: Bupleurum21_contig00009517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009517
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276552.1| PREDICTED: uncharacterized GPI-anchored prot...   392   e-107
emb|CBI18008.3| unnamed protein product [Vitis vinifera]              373   e-101
ref|XP_002518003.1| conserved hypothetical protein [Ricinus comm...   364   2e-98
ref|XP_002326107.1| predicted protein [Populus trichocarpa] gi|1...   345   9e-93
ref|XP_002319388.1| predicted protein [Populus trichocarpa] gi|2...   342   8e-92

>ref|XP_002276552.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Vitis
            vinifera]
          Length = 324

 Score =  392 bits (1008), Expect = e-107
 Identities = 199/269 (73%), Positives = 217/269 (80%), Gaps = 4/269 (1%)
 Frame = +1

Query: 334  LFDQTLAGLLAEPA----QPIKPGEYQSPNTVPAFPVQTEAQVCRLDLSAELFGGVNAAC 501
            LF+ +LAGLLAEPA    QP+KPG+Y +PNTVPAFPVQTE Q CRLDLSAELFGGVN AC
Sbjct: 19   LFEPSLAGLLAEPADSHQQPMKPGDYSTPNTVPAFPVQTETQTCRLDLSAELFGGVNDAC 78

Query: 502  GRNLDRSRCCPVLAAWLFAAHARSALQISAAPPVSSDLPMRPDDSQKCVNTLQSSLEDRN 681
            GRNLDRSRCCPVLAAWLFAAHARSALQ++A  P SSDLPM PDDSQKCVN+LQSSL+ RN
Sbjct: 79   GRNLDRSRCCPVLAAWLFAAHARSALQVAAPAPASSDLPMMPDDSQKCVNSLQSSLQSRN 138

Query: 682  IHIPQPNNTCDAVLCFCGIRLXXXXXXXXXXXXXXXXXXXXXXXQLSSLTCPAAFNVSGT 861
            IHIPQPN TCDA+LCFCGIRL                       Q++SL+CPAAFN+S +
Sbjct: 139  IHIPQPNATCDAILCFCGIRL----------------------HQITSLSCPAAFNIS-S 175

Query: 862  ARNATPTAAVKNLEHNCRNSSYAGCTRCLGALQKLKGDGKNGTSRHHPEEENGGDRVRKM 1041
             RNATPTAAVKNLE NCRNSSY+GCT+CLGALQKLKGDGKNGT       E GGDR  KM
Sbjct: 176  YRNATPTAAVKNLERNCRNSSYSGCTKCLGALQKLKGDGKNGT-------EEGGDRASKM 228

Query: 1042 LNRDCQLMGLTWLLARNKTAYIPTVSAVL 1128
             +RDCQLMGLTWLLARNKTAYIPTVSAVL
Sbjct: 229  FSRDCQLMGLTWLLARNKTAYIPTVSAVL 257


>emb|CBI18008.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  373 bits (957), Expect = e-101
 Identities = 186/249 (74%), Positives = 202/249 (81%)
 Frame = +1

Query: 382  IKPGEYQSPNTVPAFPVQTEAQVCRLDLSAELFGGVNAACGRNLDRSRCCPVLAAWLFAA 561
            +KPG+Y +PNTVPAFPVQTE Q CRLDLSAELFGGVN ACGRNLDRSRCCPVLAAWLFAA
Sbjct: 1    MKPGDYSTPNTVPAFPVQTETQTCRLDLSAELFGGVNDACGRNLDRSRCCPVLAAWLFAA 60

Query: 562  HARSALQISAAPPVSSDLPMRPDDSQKCVNTLQSSLEDRNIHIPQPNNTCDAVLCFCGIR 741
            HARSALQ++A  P SSDLPM PDDSQKCVN+LQSSL+ RNIHIPQPN TCDA+LCFCGIR
Sbjct: 61   HARSALQVAAPAPASSDLPMMPDDSQKCVNSLQSSLQSRNIHIPQPNATCDAILCFCGIR 120

Query: 742  LXXXXXXXXXXXXXXXXXXXXXXXQLSSLTCPAAFNVSGTARNATPTAAVKNLEHNCRNS 921
            L                       Q++SL+CPAAFN+S + RNATPTAAVKNLE NCRNS
Sbjct: 121  L----------------------HQITSLSCPAAFNIS-SYRNATPTAAVKNLERNCRNS 157

Query: 922  SYAGCTRCLGALQKLKGDGKNGTSRHHPEEENGGDRVRKMLNRDCQLMGLTWLLARNKTA 1101
            SY+GCT+CLGALQKLKGDGKNGT       E GGDR  KM +RDCQLMGLTWLLARNKTA
Sbjct: 158  SYSGCTKCLGALQKLKGDGKNGT-------EEGGDRASKMFSRDCQLMGLTWLLARNKTA 210

Query: 1102 YIPTVSAVL 1128
            YIPTVSAVL
Sbjct: 211  YIPTVSAVL 219


>ref|XP_002518003.1| conserved hypothetical protein [Ricinus communis]
            gi|223542985|gb|EEF44521.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 318

 Score =  364 bits (934), Expect = 2e-98
 Identities = 191/282 (67%), Positives = 211/282 (74%), Gaps = 8/282 (2%)
 Frame = +1

Query: 307  FLWPFVFTVLFDQTLAGLLAEPA----QPIKPGEYQSPNTVPAFPVQTEAQVCRLDLSAE 474
            F+   +F  LF  +LAGLLAEP     QP+KPG+Y SPNTVPAFPVQTE+QVCRLDLSAE
Sbjct: 4    FVSVIIFFYLFTPSLAGLLAEPVSGSNQPLKPGDYSSPNTVPAFPVQTESQVCRLDLSAE 63

Query: 475  LFGGVNAACGRNLDRSRCCPVLAAWLFAAHARSALQISAAPPVSS--DLPMRPDDSQKCV 648
            LFGGVN ACGR LDRSRCCPVLAAWLFAAHAR ALQ+SA+ P S+  DLPM PDDSQKCV
Sbjct: 64   LFGGVNDACGRELDRSRCCPVLAAWLFAAHARYALQVSASAPASAEEDLPMMPDDSQKCV 123

Query: 649  NTLQSSLEDRNIHIPQPNNTCDAVLCFCGIRLXXXXXXXXXXXXXXXXXXXXXXXQLSSL 828
            N+LQS+L  RN+ IPQPN +CDA+LCFCGIRL                       Q++SL
Sbjct: 124  NSLQSALLSRNVKIPQPNASCDAILCFCGIRL----------------------HQITSL 161

Query: 829  TCPAAFNVSGTARNATPTAAVKNLEHNCRNSSYAGCTRCLGALQKLKGDGKNGTSRHHPE 1008
            +CPAAFNVS    NATPTAAVKNLE NC+NSSY+GCT+CLGALQKLKG  K  T      
Sbjct: 162  SCPAAFNVSSGFHNATPTAAVKNLEKNCKNSSYSGCTKCLGALQKLKGSNKTVT------ 215

Query: 1009 EENGG--DRVRKMLNRDCQLMGLTWLLARNKTAYIPTVSAVL 1128
               GG  DR  KM NRDCQLMGLTWLLARNKTAYIPTVSAVL
Sbjct: 216  --GGGRDDRANKMFNRDCQLMGLTWLLARNKTAYIPTVSAVL 255


>ref|XP_002326107.1| predicted protein [Populus trichocarpa] gi|118488098|gb|ABK95869.1|
            unknown [Populus trichocarpa] gi|222862982|gb|EEF00489.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  345 bits (886), Expect = 9e-93
 Identities = 177/275 (64%), Positives = 205/275 (74%), Gaps = 5/275 (1%)
 Frame = +1

Query: 319  FVFTVLFDQTLAGLLAEPA----QPIKPGEYQSPNTVPAFPVQTEAQVCRLDLSAELFGG 486
            F+FT LF  +L+  L+EP     QP+KPG+Y +PNTVPAFPVQTE+Q+C LDLSAELFGG
Sbjct: 8    FLFTSLFTHSLSSFLSEPVSGQNQPLKPGDYSNPNTVPAFPVQTESQICHLDLSAELFGG 67

Query: 487  VNAACGRNLDRSRCCPVLAAWLFAAHARSALQISAAPPVSS-DLPMRPDDSQKCVNTLQS 663
            VN ACGR+LDRSRCCPVLAAWLFAAHARSALQ+ A  P S+ DLPM PDDSQKCVN+LQS
Sbjct: 68   VNDACGRDLDRSRCCPVLAAWLFAAHARSALQVQAPAPTSAPDLPMMPDDSQKCVNSLQS 127

Query: 664  SLEDRNIHIPQPNNTCDAVLCFCGIRLXXXXXXXXXXXXXXXXXXXXXXXQLSSLTCPAA 843
            +L  +N+ + QPN +CDA+LCFCGIRL                       Q+SSL+CPAA
Sbjct: 128  ALLSKNVKLAQPNASCDAILCFCGIRL----------------------HQISSLSCPAA 165

Query: 844  FNVSGTARNATPTAAVKNLEHNCRNSSYAGCTRCLGALQKLKGDGKNGTSRHHPEEENGG 1023
            FNVS    NATPTAAVKNLE NC+NS+Y+GCT+CLGALQKLK   KN T     ++    
Sbjct: 166  FNVSSAFHNATPTAAVKNLEKNCKNSTYSGCTKCLGALQKLK--AKNETQ----DKSTRD 219

Query: 1024 DRVRKMLNRDCQLMGLTWLLARNKTAYIPTVSAVL 1128
            +R  KM  RDCQLMGLTWLLARNKT YIPTVSAVL
Sbjct: 220  ERASKMFERDCQLMGLTWLLARNKTQYIPTVSAVL 254


>ref|XP_002319388.1| predicted protein [Populus trichocarpa] gi|222857764|gb|EEE95311.1|
            predicted protein [Populus trichocarpa]
          Length = 293

 Score =  342 bits (878), Expect = 8e-92
 Identities = 180/279 (64%), Positives = 202/279 (72%), Gaps = 5/279 (1%)
 Frame = +1

Query: 307  FLWPFVFTVLFDQTLAGLLAEPA----QPIKPGEYQSPNTVPAFPVQTEAQVCRLDLSAE 474
            FL  F+ T LF  +L+  LAEP     QP+KPG+Y +PNTVPA PVQTE+Q+C LDLSAE
Sbjct: 4    FLTIFLSTSLFALSLSSFLAEPVSGQNQPLKPGDYSNPNTVPAIPVQTESQICHLDLSAE 63

Query: 475  LFGGVNAACGRNLDRSRCCPVLAAWLFAAHARSALQISA-APPVSSDLPMRPDDSQKCVN 651
            LFGGVN ACGR+LDRSRCCPVLAAWLFAAHARSALQ+ A AP  S D PM PDDSQKCVN
Sbjct: 64   LFGGVNDACGRDLDRSRCCPVLAAWLFAAHARSALQVHASAPTPSPDFPMMPDDSQKCVN 123

Query: 652  TLQSSLEDRNIHIPQPNNTCDAVLCFCGIRLXXXXXXXXXXXXXXXXXXXXXXXQLSSLT 831
            +LQS+L  +N+ +PQPN +CDA+LCFCGIRL                        +SSL+
Sbjct: 124  SLQSALLSKNVKLPQPNASCDAILCFCGIRL----------------------HHISSLS 161

Query: 832  CPAAFNVSGTARNATPTAAVKNLEHNCRNSSYAGCTRCLGALQKLKGDGKNGTSRHHPEE 1011
            CPAAFNVS    NATPTAAV NLE NC+NSSYAGCT+CLGALQK     KNGT      +
Sbjct: 162  CPAAFNVSSGFHNATPTAAVTNLEKNCKNSSYAGCTKCLGALQK----AKNGTQDRSTRD 217

Query: 1012 ENGGDRVRKMLNRDCQLMGLTWLLARNKTAYIPTVSAVL 1128
            E    R  KM NRDCQLMGLTWLLARNKT YIPTVSAVL
Sbjct: 218  E----RASKMFNRDCQLMGLTWLLARNKTEYIPTVSAVL 252


Top