BLASTX nr result

ID: Bupleurum21_contig00009515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009515
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306009.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat...   129   3e-28
emb|CBI27699.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat...   127   7e-28
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]   127   7e-28

>ref|XP_002306009.1| predicted protein [Populus trichocarpa] gi|222848973|gb|EEE86520.1|
           predicted protein [Populus trichocarpa]
          Length = 870

 Score =  130 bits (327), Expect = 1e-28
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = -1

Query: 254 KDLVMFTAMVGGYAMHGMAAEALGVYFNMLELGIEPDPVIITTILSACSHAGLISEGLRI 75
           KDL++FTAM+ GYAMHGM  EALG +F+M+ELGI+PD VIITT+LSACSHAGL+ EGL I
Sbjct: 641 KDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDEGLNI 700

Query: 74  FDSIEKLHRLEPTMEQYGCVVDLL 3
           F SIEK+H ++ TMEQY CVVDLL
Sbjct: 701 FYSIEKVHGMKLTMEQYSCVVDLL 724


>ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  129 bits (324), Expect = 3e-28
 Identities = 60/84 (71%), Positives = 74/84 (88%)
 Frame = -1

Query: 254 KDLVMFTAMVGGYAMHGMAAEALGVYFNMLELGIEPDPVIITTILSACSHAGLISEGLRI 75
           KDLVMFTAM+GGYAMHGM+ EAL ++ +ML+LGI+PD +I T+ILSACSHAG + EGL+I
Sbjct: 655 KDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLKI 714

Query: 74  FDSIEKLHRLEPTMEQYGCVVDLL 3
           F SIEKLH ++PT+EQY CVVDLL
Sbjct: 715 FYSIEKLHGMKPTVEQYACVVDLL 738


>emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/84 (71%), Positives = 71/84 (84%)
 Frame = -1

Query: 254 KDLVMFTAMVGGYAMHGMAAEALGVYFNMLELGIEPDPVIITTILSACSHAGLISEGLRI 75
           KDLVMFTAMVGG+AMHGM  EAL ++  MLELG++PD VIIT +L ACSHAGL+ EG +I
Sbjct: 589 KDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKI 648

Query: 74  FDSIEKLHRLEPTMEQYGCVVDLL 3
           F+SIEK+H  +PTMEQY CVVDLL
Sbjct: 649 FNSIEKVHGFQPTMEQYACVVDLL 672


>ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/84 (71%), Positives = 71/84 (84%)
 Frame = -1

Query: 254 KDLVMFTAMVGGYAMHGMAAEALGVYFNMLELGIEPDPVIITTILSACSHAGLISEGLRI 75
           KDLVMFTAMVGG+AMHGM  EAL ++  MLELG++PD VIIT +L ACSHAGL+ EG +I
Sbjct: 650 KDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKI 709

Query: 74  FDSIEKLHRLEPTMEQYGCVVDLL 3
           F+SIEK+H  +PTMEQY CVVDLL
Sbjct: 710 FNSIEKVHGFQPTMEQYACVVDLL 733


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/84 (71%), Positives = 71/84 (84%)
 Frame = -1

Query: 254  KDLVMFTAMVGGYAMHGMAAEALGVYFNMLELGIEPDPVIITTILSACSHAGLISEGLRI 75
            KDLVMFTAMVGG+AMHGM  EAL ++  MLELG++PD VIIT +L ACSHAGL+ EG +I
Sbjct: 1582 KDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKI 1641

Query: 74   FDSIEKLHRLEPTMEQYGCVVDLL 3
            F+SIEK+H  +PTMEQY CVVDLL
Sbjct: 1642 FNSIEKVHGFQPTMEQYACVVDLL 1665


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