BLASTX nr result

ID: Bupleurum21_contig00009508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009508
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513402.1| yth domain-containing protein, putative [Ric...   293   2e-77
ref|XP_002276915.2| PREDICTED: uncharacterized protein LOC100245...   292   2e-77
emb|CBI29937.3| unnamed protein product [Vitis vinifera]              292   2e-77
emb|CAN81896.1| hypothetical protein VITISV_009052 [Vitis vinifera]   292   3e-77
ref|XP_003629923.1| YTH domain family protein [Medicago truncatu...   291   7e-77

>ref|XP_002513402.1| yth domain-containing protein, putative [Ricinus communis]
           gi|223547310|gb|EEF48805.1| yth domain-containing
           protein, putative [Ricinus communis]
          Length = 636

 Score =  293 bits (749), Expect = 2e-77
 Identities = 137/188 (72%), Positives = 153/188 (81%)
 Frame = +1

Query: 1   RGRGNGFLGYGNENMDGLNELNRGPRSKSFKNQKGAAPVESTVKGQDNLVTGTNGNVEEN 180
           RGRGN + GY NEN+DGLNELNRGPR+K FKNQKG APV   VKGQ+     T    ++ 
Sbjct: 354 RGRGNNYFGYRNENIDGLNELNRGPRAKGFKNQKGFAPVTIAVKGQNTPPIETITEEKDE 413

Query: 181 PSECKGKEQYNKADFPVTYADAKFFIIKSYSEDDVHKSIKYNAWSSTQNGNKKLDAAYQE 360
            S     EQYN+ADF   Y DAKFFIIKSYSEDDVHKSIKYN W+ST NGNKKLDAAYQE
Sbjct: 414 MSAVPDLEQYNRADFLEDYTDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQE 473

Query: 361 AQQNTGNCPIFLFFSVNTSGQFVGVAEMLGPVDFDKNLEYWQQDKWVGCFPVRWHIVKDV 540
           AQQ +G CP+FLFFSVNTSGQFVG+AEM GPVDF KN+EYWQQDKW GCFPV+WHIVKD+
Sbjct: 474 AQQKSGGCPVFLFFSVNTSGQFVGLAEMGGPVDFHKNVEYWQQDKWTGCFPVKWHIVKDI 533

Query: 541 PNTMLKHI 564
           PN++LKHI
Sbjct: 534 PNSLLKHI 541


>ref|XP_002276915.2| PREDICTED: uncharacterized protein LOC100245287 [Vitis vinifera]
          Length = 646

 Score =  292 bits (748), Expect = 2e-77
 Identities = 133/188 (70%), Positives = 154/188 (81%)
 Frame = +1

Query: 1   RGRGNGFLGYGNENMDGLNELNRGPRSKSFKNQKGAAPVESTVKGQDNLVTGTNGNVEEN 180
           + R N  LGYGNENMDGLNELNRGPR+K FKNQKG  PV   V+GQ+  + G N N + N
Sbjct: 361 KSRANSVLGYGNENMDGLNELNRGPRAKGFKNQKGFGPVTLAVRGQNLQLNGNNSNSDGN 420

Query: 181 PSECKGKEQYNKADFPVTYADAKFFIIKSYSEDDVHKSIKYNAWSSTQNGNKKLDAAYQE 360
            +    KEQYN  DFP  Y+DAKFFIIKSYSEDDVHKSIKYN W+ST NGNKKLDAAYQE
Sbjct: 421 LTLVPDKEQYNSEDFPENYSDAKFFIIKSYSEDDVHKSIKYNMWASTANGNKKLDAAYQE 480

Query: 361 AQQNTGNCPIFLFFSVNTSGQFVGVAEMLGPVDFDKNLEYWQQDKWVGCFPVRWHIVKDV 540
           AQ  +G+CPIFL FSVN SGQFVGVAEM+G VDF+++LEYWQQDKW GCFPV+WH++KD+
Sbjct: 481 AQGKSGSCPIFLLFSVNASGQFVGVAEMVGSVDFNRSLEYWQQDKWTGCFPVKWHVIKDI 540

Query: 541 PNTMLKHI 564
           PN++LKHI
Sbjct: 541 PNSLLKHI 548


>emb|CBI29937.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  292 bits (748), Expect = 2e-77
 Identities = 133/188 (70%), Positives = 154/188 (81%)
 Frame = +1

Query: 1   RGRGNGFLGYGNENMDGLNELNRGPRSKSFKNQKGAAPVESTVKGQDNLVTGTNGNVEEN 180
           + R N  LGYGNENMDGLNELNRGPR+K FKNQKG  PV   V+GQ+  + G N N + N
Sbjct: 356 KSRANSVLGYGNENMDGLNELNRGPRAKGFKNQKGFGPVTLAVRGQNLQLNGNNSNSDGN 415

Query: 181 PSECKGKEQYNKADFPVTYADAKFFIIKSYSEDDVHKSIKYNAWSSTQNGNKKLDAAYQE 360
            +    KEQYN  DFP  Y+DAKFFIIKSYSEDDVHKSIKYN W+ST NGNKKLDAAYQE
Sbjct: 416 LTLVPDKEQYNSEDFPENYSDAKFFIIKSYSEDDVHKSIKYNMWASTANGNKKLDAAYQE 475

Query: 361 AQQNTGNCPIFLFFSVNTSGQFVGVAEMLGPVDFDKNLEYWQQDKWVGCFPVRWHIVKDV 540
           AQ  +G+CPIFL FSVN SGQFVGVAEM+G VDF+++LEYWQQDKW GCFPV+WH++KD+
Sbjct: 476 AQGKSGSCPIFLLFSVNASGQFVGVAEMVGSVDFNRSLEYWQQDKWTGCFPVKWHVIKDI 535

Query: 541 PNTMLKHI 564
           PN++LKHI
Sbjct: 536 PNSLLKHI 543


>emb|CAN81896.1| hypothetical protein VITISV_009052 [Vitis vinifera]
          Length = 696

 Score =  292 bits (747), Expect = 3e-77
 Identities = 132/188 (70%), Positives = 154/188 (81%)
 Frame = +1

Query: 1   RGRGNGFLGYGNENMDGLNELNRGPRSKSFKNQKGAAPVESTVKGQDNLVTGTNGNVEEN 180
           + R N  +GYGNENMDGLNELNRGPR+K FKNQKG  PV   V+GQ+  + G N N + N
Sbjct: 411 KSRANSVJGYGNENMDGLNELNRGPRAKGFKNQKGFGPVTLAVRGQNLQLNGNNSNSDGN 470

Query: 181 PSECKGKEQYNKADFPVTYADAKFFIIKSYSEDDVHKSIKYNAWSSTQNGNKKLDAAYQE 360
            +    KEQYN  DFP  Y+DAKFFIIKSYSEDDVHKSIKYN W+ST NGNKKLDAAYQE
Sbjct: 471 LTLVPDKEQYNSEDFPENYSDAKFFIIKSYSEDDVHKSIKYNMWASTANGNKKLDAAYQE 530

Query: 361 AQQNTGNCPIFLFFSVNTSGQFVGVAEMLGPVDFDKNLEYWQQDKWVGCFPVRWHIVKDV 540
           AQ  +G+CPIFL FSVN SGQFVGVAEM+G VDF+++LEYWQQDKW GCFPV+WH++KD+
Sbjct: 531 AQGKSGSCPIFLLFSVNASGQFVGVAEMVGSVDFNRSLEYWQQDKWTGCFPVKWHVIKDI 590

Query: 541 PNTMLKHI 564
           PN++LKHI
Sbjct: 591 PNSLLKHI 598


>ref|XP_003629923.1| YTH domain family protein [Medicago truncatula]
           gi|355523945|gb|AET04399.1| YTH domain family protein
           [Medicago truncatula]
          Length = 677

 Score =  291 bits (744), Expect = 7e-77
 Identities = 136/188 (72%), Positives = 153/188 (81%)
 Frame = +1

Query: 1   RGRGNGFLGYGNENMDGLNELNRGPRSKSFKNQKGAAPVESTVKGQDNLVTGTNGNVEEN 180
           RGR  G+ GYGNEN DGLNELNRGPR+K  KNQK   P   TVKGQ N+   T    +E 
Sbjct: 341 RGRNGGYFGYGNENTDGLNELNRGPRAKGGKNQKVFVPTVLTVKGQ-NVPVNTVDEEKEK 399

Query: 181 PSECKGKEQYNKADFPVTYADAKFFIIKSYSEDDVHKSIKYNAWSSTQNGNKKLDAAYQE 360
            S    +EQYNKADFP  Y DAKFF+IKSYSEDD+HKSIKYN W+STQNGNKKLDAAYQE
Sbjct: 400 NSTTPDREQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVWASTQNGNKKLDAAYQE 459

Query: 361 AQQNTGNCPIFLFFSVNTSGQFVGVAEMLGPVDFDKNLEYWQQDKWVGCFPVRWHIVKDV 540
           AQQ +G CPIFL FSVNTSGQFVG+AEM GPVDF+K+LEYWQQDKW+GCFP++WHIVKDV
Sbjct: 460 AQQKSGGCPIFLLFSVNTSGQFVGLAEMTGPVDFNKSLEYWQQDKWMGCFPLKWHIVKDV 519

Query: 541 PNTMLKHI 564
           PN +L+HI
Sbjct: 520 PNNVLRHI 527


Top