BLASTX nr result

ID: Bupleurum21_contig00009501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009501
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283454.1| PREDICTED: DPH4 homolog isoform 3 [Vitis vin...   194   2e-47
ref|XP_002327129.1| predicted protein [Populus trichocarpa] gi|2...   193   3e-47
ref|XP_002510246.1| zinc finger protein, putative [Ricinus commu...   192   6e-47
ref|XP_004152732.1| PREDICTED: diphthamide biosynthesis protein ...   182   6e-44
ref|XP_003538970.1| PREDICTED: diphthamide biosynthesis protein ...   174   2e-41

>ref|XP_002283454.1| PREDICTED: DPH4 homolog isoform 3 [Vitis vinifera]
           gi|225432794|ref|XP_002283447.1| PREDICTED: DPH4 homolog
           isoform 2 [Vitis vinifera]
           gi|225432796|ref|XP_002283441.1| PREDICTED: DPH4 homolog
           isoform 1 [Vitis vinifera]
          Length = 182

 Score =  194 bits (493), Expect = 2e-47
 Identities = 102/189 (53%), Positives = 123/189 (65%)
 Frame = +1

Query: 13  RTHYDILGVKEDATYEEIRISYRSSILNYHPDKVQNXXXXXXXXXXXXXXXXXXXXXXXX 192
           +T+YDIL VKEDA+YEEIR  YRS+ILN HPDK+Q                         
Sbjct: 10  QTYYDILSVKEDASYEEIRGCYRSAILNSHPDKLQKTTETSNTDPESG------------ 57

Query: 193 XXXXXXXXXXXXXXXDKFLEIQRAWEILGNPTSRAFYDIELEMLRQDTTTSEDVSIEDLT 372
                          D+FL+IQ+AWE L +P SRA YD  L+  RQDT T+ED+S+ED+T
Sbjct: 58  ---------------DRFLKIQKAWETLSDPRSRAVYDSGLQASRQDTATAEDLSLEDMT 102

Query: 373 IEDAGDVVELLYHCRCGDWFSIDSVELEEMGYLLSRDGDNISLQTLNSYPASVVLPCGSC 552
           IED G V+EL Y CRCGD+FS+DS EL EMGY + RDG  ISLQT +S PAS +LPCGSC
Sbjct: 103 IEDDGKVLELFYQCRCGDYFSVDSSELGEMGYAVFRDGSKISLQTPDSLPASFILPCGSC 162

Query: 553 SLKIRLLIN 579
           SLK+RLLIN
Sbjct: 163 SLKVRLLIN 171


>ref|XP_002327129.1| predicted protein [Populus trichocarpa] gi|222835444|gb|EEE73879.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  193 bits (491), Expect = 3e-47
 Identities = 97/188 (51%), Positives = 125/188 (66%)
 Frame = +1

Query: 16  THYDILGVKEDATYEEIRISYRSSILNYHPDKVQNXXXXXXXXXXXXXXXXXXXXXXXXX 195
           T+YD+L VKEDA+Y EIR SYRS+ILNYHPDK+QN                         
Sbjct: 11  TYYDVLSVKEDASYVEIRTSYRSAILNYHPDKLQNTRQASDPEDESD------------- 57

Query: 196 XXXXXXXXXXXXXXDKFLEIQRAWEILGNPTSRAFYDIELEMLRQDTTTSEDVSIEDLTI 375
                         D+F+++Q+AWEILGN  SRA YD +L  LRQDT  SED+S+E++ +
Sbjct: 58  --------------DRFMKVQKAWEILGNSMSRAVYDSKLRALRQDTEVSEDISLEEMMV 103

Query: 376 EDAGDVVELLYHCRCGDWFSIDSVELEEMGYLLSRDGDNISLQTLNSYPASVVLPCGSCS 555
           ED G++ E+ Y C+CGD+FSIDS E E+MGY LSRD  +IS+Q  ++ PASVVLPCGSCS
Sbjct: 104 EDNGEIFEMFYQCQCGDYFSIDSSEFEKMGYTLSRDECHISIQKPDALPASVVLPCGSCS 163

Query: 556 LKIRLLIN 579
           L++RLLIN
Sbjct: 164 LQVRLLIN 171


>ref|XP_002510246.1| zinc finger protein, putative [Ricinus communis]
           gi|223550947|gb|EEF52433.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 182

 Score =  192 bits (488), Expect = 6e-47
 Identities = 97/193 (50%), Positives = 127/193 (65%)
 Frame = +1

Query: 1   ILMTRTHYDILGVKEDATYEEIRISYRSSILNYHPDKVQNXXXXXXXXXXXXXXXXXXXX 180
           I +  THYDIL VKEDA+YEEIR SYR S+LN+HPDK+Q+                    
Sbjct: 6   ISVQETHYDILSVKEDASYEEIRTSYRLSLLNHHPDKLQSAHRTSDPQDELG-------- 57

Query: 181 XXXXXXXXXXXXXXXXXXXDKFLEIQRAWEILGNPTSRAFYDIELEMLRQDTTTSEDVSI 360
                              D+FL++Q+AW++LG+  SRA YD EL  LR+DT  +EDVS+
Sbjct: 58  -------------------DRFLKVQKAWKVLGDARSRAIYDNELRALRKDTGVAEDVSL 98

Query: 361 EDLTIEDAGDVVELLYHCRCGDWFSIDSVELEEMGYLLSRDGDNISLQTLNSYPASVVLP 540
           ED+ IED G+ +EL Y CRCGD+FS+DS+EL +MGY+L RD + IS +T +  PASV+LP
Sbjct: 99  EDMMIEDGGEALELFYQCRCGDYFSVDSLELGKMGYILLRDENKISFETTDVSPASVLLP 158

Query: 541 CGSCSLKIRLLIN 579
           CGSCSL++RLLIN
Sbjct: 159 CGSCSLQVRLLIN 171


>ref|XP_004152732.1| PREDICTED: diphthamide biosynthesis protein 4-like [Cucumis
           sativus] gi|449496015|ref|XP_004160012.1| PREDICTED:
           diphthamide biosynthesis protein 4-like [Cucumis
           sativus]
          Length = 173

 Score =  182 bits (462), Expect = 6e-44
 Identities = 89/189 (47%), Positives = 125/189 (66%)
 Frame = +1

Query: 16  THYDILGVKEDATYEEIRISYRSSILNYHPDKVQNXXXXXXXXXXXXXXXXXXXXXXXXX 195
           T+YD+L ++EDA+++EIR SYRS++LN+HPDK+Q                          
Sbjct: 11  TYYDVLSLREDASFDEIRASYRSALLNFHPDKLQ-------------------------- 44

Query: 196 XXXXXXXXXXXXXXDKFLEIQRAWEILGNPTSRAFYDIELEMLRQDTTTSEDVSIEDLTI 375
                         +++ ++Q+AWE+LG+  SRA YD EL+  + D   +E +S+ED+ +
Sbjct: 45  -AMCHKSHPDDIMGERYFKVQKAWEVLGSSKSRASYDRELQAAKGDAIGAESISLEDMVV 103

Query: 376 EDAGDVVELLYHCRCGDWFSIDSVELEEMGYLLSRDGDNISLQTLNSYPASVVLPCGSCS 555
           ED G+VVELLY CRCGD+F IDS EL+EMGY L R+G  +SL+TLN+ PASVVLPCGSCS
Sbjct: 104 EDKGEVVELLYQCRCGDYFFIDSGELDEMGYPLLRNGSKVSLRTLNALPASVVLPCGSCS 163

Query: 556 LKIRLLINN 582
           LK+RLLI++
Sbjct: 164 LKVRLLIDS 172


>ref|XP_003538970.1| PREDICTED: diphthamide biosynthesis protein 4-like [Glycine max]
          Length = 178

 Score =  174 bits (441), Expect = 2e-41
 Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 3/191 (1%)
 Frame = +1

Query: 16  THYDILGVKEDATYEEIRISYRSSILNYHPDKVQNXXXXXXXXXXXXXXXXXXXXXXXXX 195
           THY++L VKEDA YEEIR SYRS++L+ HPDK+                           
Sbjct: 11  THYEVLNVKEDANYEEIRASYRSAVLSLHPDKLLKTSETSSSNQTAE------------- 57

Query: 196 XXXXXXXXXXXXXXDKFLEIQRAWEILGNPTSRAFYDIELEMLRQDTTTS---EDVSIED 366
                         ++FL++Q+AWEIL N +SR+FYD +L   RQD   +   ED+S++D
Sbjct: 58  --------------ERFLKVQKAWEILSNSSSRSFYDNDLRSSRQDVLAADVAEDLSLQD 103

Query: 367 LTIEDAGDVVELLYHCRCGDWFSIDSVELEEMGYLLSRDGDNISLQTLNSYPASVVLPCG 546
           + IED G+ +EL Y CRCGD+FS+DS+EL+ MGY L R+G  IS+  +++ P SV+LPCG
Sbjct: 104 MMIEDDGEALELFYQCRCGDYFSVDSLELKNMGYSLLREGSGISIMNVDTSPGSVILPCG 163

Query: 547 SCSLKIRLLIN 579
           SCSLK RLLIN
Sbjct: 164 SCSLKARLLIN 174


Top