BLASTX nr result

ID: Bupleurum21_contig00009495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009495
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635910.1| E3 ubiquitin-protein ligase RNF181 [Medicago...   179   7e-43
emb|CAN63309.1| hypothetical protein VITISV_017174 [Vitis vinifera]   175   2e-41
ref|XP_002514591.1| zinc finger protein, putative [Ricinus commu...   172   1e-40
emb|CBI15364.3| unnamed protein product [Vitis vinifera]              171   2e-40
ref|XP_002273441.1| PREDICTED: uncharacterized protein LOC100268...   171   2e-40

>ref|XP_003635910.1| E3 ubiquitin-protein ligase RNF181 [Medicago truncatula]
           gi|355501845|gb|AES83048.1| E3 ubiquitin-protein ligase
           RNF181 [Medicago truncatula]
          Length = 379

 Score =  179 bits (455), Expect = 7e-43
 Identities = 106/238 (44%), Positives = 133/238 (55%), Gaps = 30/238 (12%)
 Frame = +3

Query: 333 GLCLPNSTMLDDDGERDENEELNWDELVADRQG---------------LSVEVTVNSEIS 467
           GLC  +S  L+DD     N+   W+E++  R                 + V+V VN E+ 
Sbjct: 144 GLCW-DSLCLEDDHRSVLND---WEEVIEGRVNENEIEEASSSLLIDEVEVDVDVNVEVE 199

Query: 468 YDDSM----------NIGEEDLRDLEWDILLAENNFNREYELENDD-----LYVTVQDGY 602
            D+              GEE LR LEW+ILLA NN  R   LE++D     LY+ V DG 
Sbjct: 200 IDEQSMESGFEGEEDEAGEEALRYLEWEILLAFNNLERNGGLEHEDESLNNLYLAVHDGI 259

Query: 603 IYAVSSGHPLFAQQPQTEDALQGSPPAAKSVVENLVSVILTHDYAQENNVVCAVCKDEIN 782
           I   +    LF Q  + +  L+GSPPAAKS VENL  V LT +  +E +VVCAVCKDE+ 
Sbjct: 260 ISGNTDYDILFGQLLENDSGLKGSPPAAKSFVENLPLVELTEEELKEKDVVCAVCKDEVT 319

Query: 783 VLESATRLPCSHHYHGECIVPWLNIRNTCPVCRFELPTDDADYXXXXXXXGVGGLLDY 956
           V E   +LPCSH YHG+CI+PWLNIRNTCPVCR+ELPTDD DY           LLD+
Sbjct: 320 VEEKVGKLPCSHCYHGDCILPWLNIRNTCPVCRYELPTDDDDYEQSKVRRVARDLLDF 377


>emb|CAN63309.1| hypothetical protein VITISV_017174 [Vitis vinifera]
          Length = 310

 Score =  175 bits (443), Expect = 2e-41
 Identities = 97/194 (50%), Positives = 121/194 (62%), Gaps = 3/194 (1%)
 Frame = +3

Query: 339 CLPNSTMLDDDGERDENEELNWDELVADRQGLSVEVTVNSEISYDDSMNIGEEDLRDLEW 518
           CLP    L+D   R  NE+  W++ V +R  L        E + D      +E  R L+W
Sbjct: 117 CLP----LEDT--RTNNEDFEWEQ-VDERASLKXGEEEEEEEAGDGR----DEAARSLDW 165

Query: 519 DILLAENNFNREYELEND---DLYVTVQDGYIYAVSSGHPLFAQQPQTEDALQGSPPAAK 689
           ++LLA NN  R   LE+D   D + T QD Y+ A      LF    + +  L+GSPPAAK
Sbjct: 166 EVLLAMNNLERTLNLEHDLDIDSFFTDQDDYVNATEYV-TLFGLFTEDDAGLKGSPPAAK 224

Query: 690 SVVENLVSVILTHDYAQENNVVCAVCKDEINVLESATRLPCSHHYHGECIVPWLNIRNTC 869
           SVV+NL  V LT  Y ++NNVVCAVCKDEI + E   RLPCSHHYHG+CIVPWL+IRNTC
Sbjct: 225 SVVQNLPVVELTQQYLEKNNVVCAVCKDEILLEEKVKRLPCSHHYHGDCIVPWLSIRNTC 284

Query: 870 PVCRFELPTDDADY 911
           PVCR+ELPTDD +Y
Sbjct: 285 PVCRYELPTDDPEY 298


>ref|XP_002514591.1| zinc finger protein, putative [Ricinus communis]
           gi|223546195|gb|EEF47697.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 479

 Score =  172 bits (436), Expect = 1e-40
 Identities = 92/206 (44%), Positives = 126/206 (61%), Gaps = 18/206 (8%)
 Frame = +3

Query: 348 NSTMLDDDGERDENEELNWDEL-------------VADRQGLSVEVTVNSEISYDDSMNI 488
           +S  L+D   R+ NE+  W+E+             V D +  SV ++++  I+ +D +N+
Sbjct: 261 DSLQLED--HRENNEDFEWEEVDGRVDEREVLSMFVDDEEAASVSLSISPVIAPEDMVNV 318

Query: 489 GEED-LRDLEWDILLAENNFNREYELENDDL----YVTVQDGYIYAVSSGHPLFAQQPQT 653
                  +LEW++LL  NN +   + ++DD     Y    D YIY       LF Q  + 
Sbjct: 319 ERVGGFGNLEWEVLLNANNLDSHADHDHDDRNAEPYFGDHDDYIYTAEY-EMLFGQFAEN 377

Query: 654 EDALQGSPPAAKSVVENLVSVILTHDYAQENNVVCAVCKDEINVLESATRLPCSHHYHGE 833
           E++L   PPAAKSVVE L SV+LT +  + NN +CAVCKDEINV E A +LPC+H YHG+
Sbjct: 378 ENSLIVRPPAAKSVVEKLPSVVLTKEDVESNNALCAVCKDEINVGEKAKQLPCTHRYHGD 437

Query: 834 CIVPWLNIRNTCPVCRFELPTDDADY 911
           CI+PWL IRNTCPVCR+ELPTDDADY
Sbjct: 438 CILPWLGIRNTCPVCRYELPTDDADY 463


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score =  171 bits (434), Expect = 2e-40
 Identities = 92/200 (46%), Positives = 129/200 (64%), Gaps = 12/200 (6%)
 Frame = +3

Query: 348  NSTMLDDDGERDENEELNW---DELVADRQGLSVEVTVNSE-------ISYDDSMNIG-E 494
            +S  LDD   R+ NE+  W   D+++ +R+ L++ +  + E       +     +++G E
Sbjct: 1152 DSLQLDD--HRETNEDFEWEEVDDVIDEREVLNMVLGPDEEGPIPLLPVGEPVEVDVGRE 1209

Query: 495  EDLRDLEWDILLAENNFNREYELEND-DLYVTVQDGYIYAVSSGHPLFAQQPQTEDALQG 671
            E++  L+W++LLA  N +R  E+E+D + Y+     YIY  S    LF Q  + E+AL G
Sbjct: 1210 ENMVSLDWEVLLAVGNLDRTLEIEHDSEPYLADHYDYIYT-SEYDMLFGQFAENENALTG 1268

Query: 672  SPPAAKSVVENLVSVILTHDYAQENNVVCAVCKDEINVLESATRLPCSHHYHGECIVPWL 851
             PPA+KSVV+NL  V+LT    + NN +CAVCKDEINV E A +LPCSH YHG+CI+PWL
Sbjct: 1269 RPPASKSVVKNLPVVVLTQGDVENNNALCAVCKDEINVGELAKQLPCSHRYHGDCIMPWL 1328

Query: 852  NIRNTCPVCRFELPTDDADY 911
             IRNTCPVCR+ELPTDD  Y
Sbjct: 1329 GIRNTCPVCRYELPTDDPQY 1348


>ref|XP_002273441.1| PREDICTED: uncharacterized protein LOC100268065 [Vitis vinifera]
          Length = 439

 Score =  171 bits (434), Expect = 2e-40
 Identities = 92/200 (46%), Positives = 129/200 (64%), Gaps = 12/200 (6%)
 Frame = +3

Query: 348 NSTMLDDDGERDENEELNW---DELVADRQGLSVEVTVNSE-------ISYDDSMNIG-E 494
           +S  LDD   R+ NE+  W   D+++ +R+ L++ +  + E       +     +++G E
Sbjct: 232 DSLQLDD--HRETNEDFEWEEVDDVIDEREVLNMVLGPDEEGPIPLLPVGEPVEVDVGRE 289

Query: 495 EDLRDLEWDILLAENNFNREYELEND-DLYVTVQDGYIYAVSSGHPLFAQQPQTEDALQG 671
           E++  L+W++LLA  N +R  E+E+D + Y+     YIY  S    LF Q  + E+AL G
Sbjct: 290 ENMVSLDWEVLLAVGNLDRTLEIEHDSEPYLADHYDYIYT-SEYDMLFGQFAENENALTG 348

Query: 672 SPPAAKSVVENLVSVILTHDYAQENNVVCAVCKDEINVLESATRLPCSHHYHGECIVPWL 851
            PPA+KSVV+NL  V+LT    + NN +CAVCKDEINV E A +LPCSH YHG+CI+PWL
Sbjct: 349 RPPASKSVVKNLPVVVLTQGDVENNNALCAVCKDEINVGELAKQLPCSHRYHGDCIMPWL 408

Query: 852 NIRNTCPVCRFELPTDDADY 911
            IRNTCPVCR+ELPTDD  Y
Sbjct: 409 GIRNTCPVCRYELPTDDPQY 428


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