BLASTX nr result
ID: Bupleurum21_contig00009483
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00009483 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|2... 195 3e-48 ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|2... 195 3e-48 gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides] 195 3e-48 ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 193 1e-47 ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 193 1e-47 >ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|222871469|gb|EEF08600.1| predicted protein [Populus trichocarpa] Length = 775 Score = 195 bits (496), Expect = 3e-48 Identities = 92/103 (89%), Positives = 100/103 (97%) Frame = +3 Query: 3 ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182 ALHGDISQHQRERTLNGFRQGKF VLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS Sbjct: 410 ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 469 Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311 GRTGRAGKEG+AILMFT+++RR +RS+ERD GCKFEF+SPPA+ Sbjct: 470 GRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAI 512 >ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|222871465|gb|EEF08596.1| predicted protein [Populus trichocarpa] Length = 735 Score = 195 bits (496), Expect = 3e-48 Identities = 92/103 (89%), Positives = 99/103 (96%) Frame = +3 Query: 3 ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182 ALHGDISQHQRERTLNGFRQGKF VLVATDVASRGLDIPNVDLIIHYELPND ETFVHRS Sbjct: 373 ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRS 432 Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311 GRTGRAGKEG+AILMFTN++RR +RS+ERD GCKFEF+SPPA+ Sbjct: 433 GRTGRAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFVSPPAI 475 >gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides] Length = 481 Score = 195 bits (496), Expect = 3e-48 Identities = 92/103 (89%), Positives = 100/103 (97%) Frame = +3 Query: 3 ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182 ALHGDISQHQRERTLNGFRQGKF VLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS Sbjct: 116 ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 175 Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311 GRTGRAGKEG+AILMFT+++RR +RS+ERD GCKFEF+SPPA+ Sbjct: 176 GRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAI 218 >ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Glycine max] Length = 736 Score = 193 bits (491), Expect = 1e-47 Identities = 90/103 (87%), Positives = 101/103 (98%) Frame = +3 Query: 3 ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182 ALHGDISQHQRERTLNGFRQGKF VLVATDVA+RGLDIPNVDL+IHYELPNDAETFVHRS Sbjct: 370 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDAETFVHRS 429 Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311 GRTGRAGKEG+AILM+T+++RR +RS+ERDVGCKFEF+SPPA+ Sbjct: 430 GRTGRAGKEGTAILMYTSSQRRTVRSLERDVGCKFEFVSPPAM 472 >ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed protein product [Vitis vinifera] Length = 764 Score = 193 bits (490), Expect = 1e-47 Identities = 91/103 (88%), Positives = 100/103 (97%) Frame = +3 Query: 3 ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182 ALHGDISQHQRERTLNGFRQGKF VLVATDVA+RGLDIPNVDLIIHYELPND ETFVHRS Sbjct: 393 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 452 Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311 GRTGRAGKEG+AILMFT+++RR ++S+ERDVGCKFEFISPPA+ Sbjct: 453 GRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAI 495