BLASTX nr result

ID: Bupleurum21_contig00009483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009483
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48
ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48
gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]      195   3e-48
ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   193   1e-47
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   193   1e-47

>ref|XP_002330044.1| predicted protein [Populus trichocarpa] gi|222871469|gb|EEF08600.1|
           predicted protein [Populus trichocarpa]
          Length = 775

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/103 (89%), Positives = 100/103 (97%)
 Frame = +3

Query: 3   ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182
           ALHGDISQHQRERTLNGFRQGKF VLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS
Sbjct: 410 ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 469

Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311
           GRTGRAGKEG+AILMFT+++RR +RS+ERD GCKFEF+SPPA+
Sbjct: 470 GRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAI 512


>ref|XP_002330040.1| predicted protein [Populus trichocarpa] gi|222871465|gb|EEF08596.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/103 (89%), Positives = 99/103 (96%)
 Frame = +3

Query: 3   ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182
           ALHGDISQHQRERTLNGFRQGKF VLVATDVASRGLDIPNVDLIIHYELPND ETFVHRS
Sbjct: 373 ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRS 432

Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311
           GRTGRAGKEG+AILMFTN++RR +RS+ERD GCKFEF+SPPA+
Sbjct: 433 GRTGRAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFVSPPAI 475


>gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 481

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/103 (89%), Positives = 100/103 (97%)
 Frame = +3

Query: 3   ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182
           ALHGDISQHQRERTLNGFRQGKF VLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS
Sbjct: 116 ALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 175

Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311
           GRTGRAGKEG+AILMFT+++RR +RS+ERD GCKFEF+SPPA+
Sbjct: 176 GRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAI 218


>ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Glycine max]
          Length = 736

 Score =  193 bits (491), Expect = 1e-47
 Identities = 90/103 (87%), Positives = 101/103 (98%)
 Frame = +3

Query: 3   ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182
           ALHGDISQHQRERTLNGFRQGKF VLVATDVA+RGLDIPNVDL+IHYELPNDAETFVHRS
Sbjct: 370 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDAETFVHRS 429

Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311
           GRTGRAGKEG+AILM+T+++RR +RS+ERDVGCKFEF+SPPA+
Sbjct: 430 GRTGRAGKEGTAILMYTSSQRRTVRSLERDVGCKFEFVSPPAM 472


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
           protein product [Vitis vinifera]
          Length = 764

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/103 (88%), Positives = 100/103 (97%)
 Frame = +3

Query: 3   ALHGDISQHQRERTLNGFRQGKFNVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRS 182
           ALHGDISQHQRERTLNGFRQGKF VLVATDVA+RGLDIPNVDLIIHYELPND ETFVHRS
Sbjct: 393 ALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRS 452

Query: 183 GRTGRAGKEGSAILMFTNNERRKIRSIERDVGCKFEFISPPAV 311
           GRTGRAGKEG+AILMFT+++RR ++S+ERDVGCKFEFISPPA+
Sbjct: 453 GRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAI 495


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