BLASTX nr result

ID: Bupleurum21_contig00009478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009478
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327549.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-28
gb|AFK39962.1| unknown [Lotus japonicus]                               97   6e-24
ref|XP_003543592.1| PREDICTED: beta-galactosidase 17-like [Glyci...    95   8e-24
ref|XP_003597598.1| Beta-galactosidase [Medicago truncatula] gi|...    94   1e-22
gb|ABD28499.1| Galactose-binding like [Medicago truncatula]            94   1e-22

>ref|XP_002327549.1| predicted protein [Populus trichocarpa] gi|222836103|gb|EEE74524.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score =  102 bits (253), Expect(2) = 2e-28
 Identities = 46/65 (70%), Positives = 52/65 (80%), Gaps = 3/65 (4%)
 Frame = +2

Query: 473 PAFYVGSFA---AGDVHDTFISFTGWGKGIAFVNGFNIGRFWPSKGPQCNLYVPAPILHN 643
           PAF+ G F    A  +HDTFISF+GWGKGIA VN FNIGR+WPS GPQCNLYVPAPIL +
Sbjct: 545 PAFFTGHFFIENANQIHDTFISFSGWGKGIAVVNDFNIGRYWPSFGPQCNLYVPAPILRH 604

Query: 644 GRNVV 658
           G NV+
Sbjct: 605 GENVL 609



 Score = 50.1 bits (118), Expect(2) = 2e-28
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +3

Query: 216 GILSSVYLNEEPLHEWKILSIPFEKVLEAQKINPIFQEAPSDYVKLSNQQRLK 374
           GILSSV+L+   LH WK++ IPF  + E  KIN I + A S ++ +S Q+ LK
Sbjct: 488 GILSSVFLDGIILHGWKMIPIPFHNLNEVPKINLIIEVAHSRFITVSTQRELK 540


>gb|AFK39962.1| unknown [Lotus japonicus]
          Length = 261

 Score = 97.1 bits (240), Expect(2) = 6e-24
 Identities = 45/66 (68%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
 Frame = +2

Query: 464 SIEPAFYVGSF---AAGDVHDTFISFTGWGKGIAFVNGFNIGRFWPSKGPQCNLYVPAPI 634
           S EPAFY G F    +  V DTFISF  WGKG+AFVN FNIGR+WP +GPQCNLYVPAPI
Sbjct: 162 SREPAFYSGRFFIDKSSQVKDTFISFNNWGKGVAFVNDFNIGRYWPVRGPQCNLYVPAPI 221

Query: 635 LHNGRN 652
           L  G N
Sbjct: 222 LKQGDN 227



 Score = 39.7 bits (91), Expect(2) = 6e-24
 Identities = 19/51 (37%), Positives = 29/51 (56%)
 Frame = +3

Query: 216 GILSSVYLNEEPLHEWKILSIPFEKVLEAQKINPIFQEAPSDYVKLSNQQR 368
           GILSSVYL+ E +  WK+  +P   + E    NPI Q + S   ++S  ++
Sbjct: 102 GILSSVYLDGEIVQGWKMFPVPLHNLNEVPSYNPIIQSSYSALKEISASRK 152


>ref|XP_003543592.1| PREDICTED: beta-galactosidase 17-like [Glycine max]
          Length = 708

 Score = 95.1 bits (235), Expect(2) = 8e-24
 Identities = 44/66 (66%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
 Frame = +2

Query: 464 SIEPAFYVGSFA---AGDVHDTFISFTGWGKGIAFVNGFNIGRFWPSKGPQCNLYVPAPI 634
           S EPAFY G F    +  V DTFISF  WGKGI FVN FNIGR+WP +GPQCNLYVPAP+
Sbjct: 607 SKEPAFYSGHFLIDKSSQVKDTFISFNNWGKGIVFVNDFNIGRYWPLRGPQCNLYVPAPL 666

Query: 635 LHNGRN 652
           L  G N
Sbjct: 667 LKQGDN 672



 Score = 41.2 bits (95), Expect(2) = 8e-24
 Identities = 21/48 (43%), Positives = 29/48 (60%)
 Frame = +3

Query: 216 GILSSVYLNEEPLHEWKILSIPFEKVLEAQKINPIFQEAPSDYVKLSN 359
           GILSSVYL++E +  WK+  IP   + E    NPI Q A S +  +S+
Sbjct: 547 GILSSVYLDKEQVKGWKMFPIPLHNLNEMSTYNPITQVAYSAFSGISS 594


>ref|XP_003597598.1| Beta-galactosidase [Medicago truncatula]
           gi|355486646|gb|AES67849.1| Beta-galactosidase [Medicago
           truncatula]
          Length = 694

 Score = 94.0 bits (232), Expect(2) = 1e-22
 Identities = 42/68 (61%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
 Frame = +2

Query: 464 SIEPAFYVGSFA---AGDVHDTFISFTGWGKGIAFVNGFNIGRFWPSKGPQCNLYVPAPI 634
           S EPAFY G F       V DTF+SF  WGKG+ FVN FN+GR+WP +GPQCNLYVPAP+
Sbjct: 593 SKEPAFYSGHFLIDKTSQVKDTFLSFRNWGKGVVFVNDFNLGRYWPLRGPQCNLYVPAPV 652

Query: 635 LHNGRNVV 658
           L  G N V
Sbjct: 653 LKQGDNFV 660



 Score = 38.5 bits (88), Expect(2) = 1e-22
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +3

Query: 216 GILSSVYLNEEPLHEWKILSIPFEKVLEAQKINPIFQEAPSDYVKLSNQQRLKINR 383
           GILSSVYL+   +  WK+  IP   + E    N I Q + S + ++S  ++  +N+
Sbjct: 533 GILSSVYLDGNRVQGWKMFPIPLHNLNEVPNYNRIMQASYSAFGEISTSRKRLMNK 588


>gb|ABD28499.1| Galactose-binding like [Medicago truncatula]
          Length = 492

 Score = 94.0 bits (232), Expect(2) = 1e-22
 Identities = 42/68 (61%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
 Frame = +2

Query: 464 SIEPAFYVGSFA---AGDVHDTFISFTGWGKGIAFVNGFNIGRFWPSKGPQCNLYVPAPI 634
           S EPAFY G F       V DTF+SF  WGKG+ FVN FN+GR+WP +GPQCNLYVPAP+
Sbjct: 391 SKEPAFYSGHFLIDKTSQVKDTFLSFRNWGKGVVFVNDFNLGRYWPLRGPQCNLYVPAPV 450

Query: 635 LHNGRNVV 658
           L  G N V
Sbjct: 451 LKQGDNFV 458



 Score = 38.5 bits (88), Expect(2) = 1e-22
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = +3

Query: 216 GILSSVYLNEEPLHEWKILSIPFEKVLEAQKINPIFQEAPSDYVKLSNQQRLKINR 383
           GILSSVYL+   +  WK+  IP   + E    N I Q + S + ++S  ++  +N+
Sbjct: 331 GILSSVYLDGNRVQGWKMFPIPLHNLNEVPNYNRIMQASYSAFGEISTSRKRLMNK 386


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