BLASTX nr result

ID: Bupleurum21_contig00009440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009440
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27144.3| unnamed protein product [Vitis vinifera]              257   2e-66
ref|XP_002277069.1| PREDICTED: ATP-dependent Clp protease proteo...   257   2e-66
emb|CAN64666.1| hypothetical protein VITISV_024612 [Vitis vinifera]   257   2e-66
ref|XP_002306383.1| predicted protein [Populus trichocarpa] gi|1...   250   3e-64
ref|XP_004148570.1| PREDICTED: ATP-dependent Clp protease proteo...   249   4e-64

>emb|CBI27144.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  257 bits (657), Expect = 2e-66
 Identities = 133/186 (71%), Positives = 143/186 (76%)
 Frame = +3

Query: 3   RIVYINGPISDDTSHVVVAQLLFLESENPSKPIHMYINSPGGAVTAGLAIYDTMQYIRSP 182
           RIV INGPISDDT+HVVVAQLLFLESENPSKPIHMY+NSPGGAV+AGLAIYDTMQYIRSP
Sbjct: 23  RIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVSAGLAIYDTMQYIRSP 82

Query: 183 VNTICIGQXXXXXXXXXXXXXKGERRSLPNATIMIHQPSGGYSGQAKDLTIRXXXXXXXX 362
           VNTIC+GQ             KGERR+LPNATIMIHQPSGGYSGQAKD+TI         
Sbjct: 83  VNTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIH--TKQIIR 140

Query: 363 XXXXXXXXXXXXXXXXXXVIQKNMDRDYFMTPEEAKDFGIVDEVIDERPMALVTDAVGNE 542
                             +IQKNMDRDYFMTPEEAK+FGI+DEVID+RPMALVTDAVGNE
Sbjct: 141 VWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGNE 200

Query: 543 SKDKTS 560
            KDK S
Sbjct: 201 GKDKGS 206


>ref|XP_002277069.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Vitis vinifera]
          Length = 241

 Score =  257 bits (657), Expect = 2e-66
 Identities = 133/186 (71%), Positives = 143/186 (76%)
 Frame = +3

Query: 3   RIVYINGPISDDTSHVVVAQLLFLESENPSKPIHMYINSPGGAVTAGLAIYDTMQYIRSP 182
           RIV INGPISDDT+HVVVAQLLFLESENPSKPIHMY+NSPGGAV+AGLAIYDTMQYIRSP
Sbjct: 55  RIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVSAGLAIYDTMQYIRSP 114

Query: 183 VNTICIGQXXXXXXXXXXXXXKGERRSLPNATIMIHQPSGGYSGQAKDLTIRXXXXXXXX 362
           VNTIC+GQ             KGERR+LPNATIMIHQPSGGYSGQAKD+TI         
Sbjct: 115 VNTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIH--TKQIIR 172

Query: 363 XXXXXXXXXXXXXXXXXXVIQKNMDRDYFMTPEEAKDFGIVDEVIDERPMALVTDAVGNE 542
                             +IQKNMDRDYFMTPEEAK+FGI+DEVID+RPMALVTDAVGNE
Sbjct: 173 VWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGNE 232

Query: 543 SKDKTS 560
            KDK S
Sbjct: 233 GKDKGS 238


>emb|CAN64666.1| hypothetical protein VITISV_024612 [Vitis vinifera]
          Length = 221

 Score =  257 bits (657), Expect = 2e-66
 Identities = 133/186 (71%), Positives = 143/186 (76%)
 Frame = +3

Query: 3   RIVYINGPISDDTSHVVVAQLLFLESENPSKPIHMYINSPGGAVTAGLAIYDTMQYIRSP 182
           RIV INGPISDDT+HVVVAQLLFLESENPSKPIHMY+NSPGGAV+AGLAIYDTMQYIRSP
Sbjct: 35  RIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLNSPGGAVSAGLAIYDTMQYIRSP 94

Query: 183 VNTICIGQXXXXXXXXXXXXXKGERRSLPNATIMIHQPSGGYSGQAKDLTIRXXXXXXXX 362
           VNTIC+GQ             KGERR+LPNATIMIHQPSGGYSGQAKD+TI         
Sbjct: 95  VNTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQPSGGYSGQAKDMTIH--TKQIIR 152

Query: 363 XXXXXXXXXXXXXXXXXXVIQKNMDRDYFMTPEEAKDFGIVDEVIDERPMALVTDAVGNE 542
                             +IQKNMDRDYFMTPEEAK+FGI+DEVID+RPMALVTDAVGNE
Sbjct: 153 VWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMALVTDAVGNE 212

Query: 543 SKDKTS 560
            KDK S
Sbjct: 213 GKDKGS 218


>ref|XP_002306383.1| predicted protein [Populus trichocarpa] gi|118481948|gb|ABK92906.1|
           unknown [Populus trichocarpa]
           gi|222855832|gb|EEE93379.1| predicted protein [Populus
           trichocarpa]
          Length = 244

 Score =  250 bits (638), Expect = 3e-64
 Identities = 131/187 (70%), Positives = 142/187 (75%)
 Frame = +3

Query: 3   RIVYINGPISDDTSHVVVAQLLFLESENPSKPIHMYINSPGGAVTAGLAIYDTMQYIRSP 182
           RIV INGPI+DDTS+VVVAQLLFLESENPSKPIHMY+NSPGG VTAGLAIYDTMQYIRSP
Sbjct: 60  RIVCINGPINDDTSNVVVAQLLFLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSP 119

Query: 183 VNTICIGQXXXXXXXXXXXXXKGERRSLPNATIMIHQPSGGYSGQAKDLTIRXXXXXXXX 362
           VNTIC+GQ             KGER++LPNATIMIHQPSGGYSGQAKDLTI         
Sbjct: 120 VNTICLGQAASMASLLLASGAKGERKALPNATIMIHQPSGGYSGQAKDLTIH--TKQIVR 177

Query: 363 XXXXXXXXXXXXXXXXXXVIQKNMDRDYFMTPEEAKDFGIVDEVIDERPMALVTDAVGNE 542
                             VIQKNMDRDYFMTPEEAK+FGI+DEVID+RPM LVTDAVG+E
Sbjct: 178 VWDALNQLYCKHTGKPIDVIQKNMDRDYFMTPEEAKEFGIIDEVIDQRPMTLVTDAVGDE 237

Query: 543 SKDKTST 563
           SK K S+
Sbjct: 238 SKQKGSS 244


>ref|XP_004148570.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Cucumis sativus]
           gi|449522109|ref|XP_004168070.1| PREDICTED:
           ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Cucumis sativus]
          Length = 243

 Score =  249 bits (637), Expect = 4e-64
 Identities = 128/185 (69%), Positives = 141/185 (76%)
 Frame = +3

Query: 3   RIVYINGPISDDTSHVVVAQLLFLESENPSKPIHMYINSPGGAVTAGLAIYDTMQYIRSP 182
           RI+ INGPISDDT+HVVVAQLLFLESENP+KPI MY+NSPGGAVTAGLAIYDTMQYIRSP
Sbjct: 61  RIICINGPISDDTAHVVVAQLLFLESENPTKPISMYLNSPGGAVTAGLAIYDTMQYIRSP 120

Query: 183 VNTICIGQXXXXXXXXXXXXXKGERRSLPNATIMIHQPSGGYSGQAKDLTIRXXXXXXXX 362
           +NTIC+GQ             KGERRSLPNATIMIHQPSGGYSGQAKD+TI         
Sbjct: 121 INTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIH--TKQIVR 178

Query: 363 XXXXXXXXXXXXXXXXXXVIQKNMDRDYFMTPEEAKDFGIVDEVIDERPMALVTDAVGNE 542
                             +IQK MDRDYFMTPEEAK+FGI+DEVID+RP+ALVTDAVGNE
Sbjct: 179 VWDALNELYSKHTSQSVEIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGNE 238

Query: 543 SKDKT 557
            KDK+
Sbjct: 239 GKDKS 243


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