BLASTX nr result

ID: Bupleurum21_contig00009415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009415
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533802.1| cellular nucleic acid binding protein, putat...   144   4e-32
ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [G...   132   1e-28
ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [G...   131   4e-28
ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vit...   128   3e-27
emb|CBI17369.3| unnamed protein product [Vitis vinifera]              100   7e-19

>ref|XP_002533802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
            gi|223526275|gb|EEF28589.1| cellular nucleic acid binding
            protein, putative [Ricinus communis]
          Length = 266

 Score =  144 bits (363), Expect = 4e-32
 Identities = 98/270 (36%), Positives = 126/270 (46%), Gaps = 25/270 (9%)
 Frame = -3

Query: 1013 SMAQES--VRSRGVVVRFNDQKGFGFIKPDDGGDDLFVHHSEIKSDG-FRTLRKDQAVEF 843
            SMA+E   VRSRG VVRF+D+KGFGFIKPDDGG+DLFVHHS IKSDG +R+L +D  VEF
Sbjct: 4    SMAEEQTGVRSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEF 63

Query: 842  VILIDEENNRTKAVDVTGIDGSSIE-----TVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 678
             + + ++ N+ +AVDVT   G  I+                                   
Sbjct: 64   TVSLSDD-NKYQAVDVTAPGGGPIQANHSNNNKRGGGGDGPAKRGGGFGGSWSSSSTRRN 122

Query: 677  XXXXXXXXXXXXXXXGHMARDC--ESXXXXXXXXXXXXXXXGHLARDCT------NARXX 522
                           GH+AR+C   +               GH ARDCT      N    
Sbjct: 123  NNGGGGGGCYNCGGSGHIARECNNNNNSNSNGGGCFKCGNTGHFARDCTTRGNNNNNNGG 182

Query: 521  XXXXGACYNCGEPGHISRECSKXXXXXXXXGACYNCGETGHIARECSK---------XXX 369
                  C+NCG  GH++R+C+         GACYNCG  GH+AR+C+             
Sbjct: 183  GDRDRGCFNCGGYGHLARDCA------GGGGACYNCGGFGHLARDCTSARGASGGGAGGG 236

Query: 368  XXXXXXXXXXXGCFTCGQEGHFARDCQNST 279
                       GCF CG+EGHFAR+C N +
Sbjct: 237  RFGGKGGSGGGGCFNCGEEGHFARECPNKS 266


>ref|XP_003520240.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
          Length = 252

 Score =  132 bits (333), Expect = 1e-28
 Identities = 90/259 (34%), Positives = 117/259 (45%), Gaps = 19/259 (7%)
 Frame = -3

Query: 1010 MAQESVRSRGVVVRFNDQKGFGFIKPDDGGDDLFVHHSEIKSDGFRTLRKDQAVEFVILI 831
            MA+E  R  GVV  FN+ KGFGFIKPDDGG+DLFVH S I+SDG+RTL +   VEF I  
Sbjct: 1    MAEE--RFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIAT 58

Query: 830  DEENNRTKAVDVTGIDGSSIETVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 651
              +N++TKAVDVTG+DG+ ++                                       
Sbjct: 59   G-DNDKTKAVDVTGVDGAPLQ---------PRAAAGNNNRAAGSGFGFGARRNGGGGAAC 108

Query: 650  XXXXXXGHMARDCE------SXXXXXXXXXXXXXXXGHLARDCTNAR------XXXXXXG 507
                  GH+ARDC                       GHLARDC                G
Sbjct: 109  YQCGEFGHLARDCNRSSNSGGGGGGSGGGCFNCGGFGHLARDCVRGGGGSVGIGGGGGGG 168

Query: 506  ACYNCGEPGHISRECSKXXXXXXXXGA---CYNCGETGHIAREC----SKXXXXXXXXXX 348
            +C+ CG  GH++R+C+         G+   C+ CGE GH+AR+C     +          
Sbjct: 169  SCFRCGGFGHMARDCATGKGNIGGGGSGGGCFRCGEVGHLARDCGMEGGRFGGGGGSGGG 228

Query: 347  XXXXGCFTCGQEGHFARDC 291
                 CF CG+ GHFAR+C
Sbjct: 229  GGKSTCFNCGKPGHFAREC 247


>ref|XP_003547928.1| PREDICTED: DNA-binding protein HEXBP-like [Glycine max]
          Length = 250

 Score =  131 bits (329), Expect = 4e-28
 Identities = 89/260 (34%), Positives = 115/260 (44%), Gaps = 20/260 (7%)
 Frame = -3

Query: 1010 MAQESVRSRGVVVRFNDQKGFGFIKPDDGGDDLFVHHSEIKSDGFRTLRKDQAVEFVILI 831
            MA+E  R  GVV  FN+ KGFGFIKPDDGG+DLFVH S I+SDG+RTL +   VEF I  
Sbjct: 1    MAEE--RFTGVVQWFNNGKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDRVEFAIAT 58

Query: 830  DEENNRTKAVDVTGIDGSSIETVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 651
              +N++TKAVDVTG+DG+ ++                                       
Sbjct: 59   G-DNDKTKAVDVTGVDGAPLQ------------PRASAANNRAGGSGFGARRNGGSGAAC 105

Query: 650  XXXXXXGHMARDCE------SXXXXXXXXXXXXXXXGHLARDCTNAR------XXXXXXG 507
                  GH+ARDC                       GHLARDC                G
Sbjct: 106  YQCGDFGHLARDCNRSSNTGGGGGGSGGGCFNCGGFGHLARDCVRGGGGNVGVGGGGGSG 165

Query: 506  ACYNCGEPGHISRECSKXXXXXXXXGA---CYNCGETGHIARECSK-----XXXXXXXXX 351
            +C+ CG  GH++R+C+          +   C+ CGE GH+AR+C                
Sbjct: 166  SCFRCGGFGHMARDCATGKGNIGGGSSGGGCFRCGEVGHLARDCGMEGGRYGDGGNSGGG 225

Query: 350  XXXXXGCFTCGQEGHFARDC 291
                  CF CG+ GHFAR+C
Sbjct: 226  GGGKSTCFNCGKPGHFAREC 245


>ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
          Length = 241

 Score =  128 bits (321), Expect = 3e-27
 Identities = 89/238 (37%), Positives = 109/238 (45%), Gaps = 29/238 (12%)
 Frame = -3

Query: 1010 MAQESVRSRGVVVRFNDQKGFGFIKPDDGGDDLFVHHSEIKSDGFRTLRKDQAVEFVILI 831
            MAQE  RS GVV  F+DQKGFGFI P++GG+DLFVH S IKSDGFR+L + + VEF I++
Sbjct: 1    MAQE--RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVL 58

Query: 830  DEENNRTKAVDVTGIDGSSIE----TVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 663
             E+  RTKAVDVTG DGSS++                                       
Sbjct: 59   GED-GRTKAVDVTGPDGSSVQGSKRDNYGGGGGGGGRGGRSGGGYGSGWRTGDRGGNGGG 117

Query: 662  XXXXXXXXXXGHMARDC----------ESXXXXXXXXXXXXXXXGHLARDCTNARXXXXX 513
                      GH+ARDC           S               GHLARDC+        
Sbjct: 118  GAACYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSRPSGGGGG 177

Query: 512  XGACYNCGEPGHISRECS---------------KXXXXXXXXGACYNCGETGHIAREC 384
             G CYNCG+ GH++R+C+                        G CYNCG+ GH AREC
Sbjct: 178  GGGCYNCGDYGHLARDCTLESGSAGRFGGGGGGGGGRFGGGGGGCYNCGQEGHFAREC 235



 Score = 80.9 bits (198), Expect = 5e-13
 Identities = 41/109 (37%), Positives = 53/109 (48%), Gaps = 18/109 (16%)
 Frame = -3

Query: 557 HLARDCTNARXXXXXXGA--------CYNCGEPGHISRECSKXXXXXXXXGACYNCGETG 402
           HLARDC          G+        CY CG+PGH++R+CS+        G CYNCG+ G
Sbjct: 129 HLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSRPSGGGGGGGGCYNCGDYG 188

Query: 401 HIARECS----------KXXXXXXXXXXXXXXGCFTCGQEGHFARDCQN 285
           H+AR+C+                         GC+ CGQEGHFAR+C N
Sbjct: 189 HLARDCTLESGSAGRFGGGGGGGGGRFGGGGGGCYNCGQEGHFARECPN 237



 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
 Frame = -3

Query: 506 ACYNCGEPGHISRECSKXXXXXXXXGA--------CYNCGETGHIARECSKXXXXXXXXX 351
           ACYNCG  GH++R+C +        G+        CY CG+ GH+AR+CS+         
Sbjct: 120 ACYNCGGTGHLARDCVRRNNGGGGGGSGGGGGGGGCYTCGQPGHLARDCSR-----PSGG 174

Query: 350 XXXXXGCFTCGQEGHFARDC 291
                GC+ CG  GH ARDC
Sbjct: 175 GGGGGGCYNCGDYGHLARDC 194


>emb|CBI17369.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  100 bits (249), Expect = 7e-19
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = -3

Query: 1010 MAQESVRSRGVVVRFNDQKGFGFIKPDDGGDDLFVHHSEIKSDGFRTLRKDQAVEFVILI 831
            MAQE  RS GVV  F+DQKGFGFI P++GG+DLFVH S IKSDGFR+L + + VEF I++
Sbjct: 1    MAQE--RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVL 58

Query: 830  DEENNRTKAVDVTGIDGSSIE 768
             E+  RTKAVDVTG DGSS++
Sbjct: 59   GED-GRTKAVDVTGPDGSSVQ 78


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