BLASTX nr result

ID: Bupleurum21_contig00009398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009398
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17917.3| unnamed protein product [Vitis vinifera]              178   9e-43
ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...   178   9e-43
emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]   157   3e-36
ref|XP_004168950.1| PREDICTED: uncharacterized protein LOC101231...   155   1e-35
ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-bin...   154   1e-35

>emb|CBI17917.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  178 bits (452), Expect = 9e-43
 Identities = 90/134 (67%), Positives = 108/134 (80%), Gaps = 1/134 (0%)
 Frame = -2

Query: 741 SGLSYYSQDTGFSGLPSSGRGLTGGPIITQVAQTMQIPLTYADDIIGVGGSKIAFIRRSS 562
           SGL  Y Q+ G SG+ SSG G  G PI+TQ+AQTMQIPL+YA+DIIG+GG+ IA+IRR+S
Sbjct: 210 SGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTS 269

Query: 561 GAVLTVQESMGLPDEITVEIKGTSSQVQAAQQLIQECVDNHRDVIPRSYGNTEPDLRSFY 382
           GA+LTVQES GLPDEITVEIKGTSSQVQ AQQLIQE + NH++ +P SYG  +  LRS Y
Sbjct: 270 GAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKEPVPSSYGKMDSGLRSSY 329

Query: 381 SQMKN-SYPSPSLA 343
           SQ+ N SY S SL+
Sbjct: 330 SQLGNTSYSSSSLS 343


>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
           vinifera]
          Length = 466

 Score =  178 bits (452), Expect = 9e-43
 Identities = 90/134 (67%), Positives = 108/134 (80%), Gaps = 1/134 (0%)
 Frame = -2

Query: 741 SGLSYYSQDTGFSGLPSSGRGLTGGPIITQVAQTMQIPLTYADDIIGVGGSKIAFIRRSS 562
           SGL  Y Q+ G SG+ SSG G  G PI+TQ+AQTMQIPL+YA+DIIG+GG+ IA+IRR+S
Sbjct: 312 SGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTS 371

Query: 561 GAVLTVQESMGLPDEITVEIKGTSSQVQAAQQLIQECVDNHRDVIPRSYGNTEPDLRSFY 382
           GA+LTVQES GLPDEITVEIKGTSSQVQ AQQLIQE + NH++ +P SYG  +  LRS Y
Sbjct: 372 GAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFISNHKEPVPSSYGKMDSGLRSSY 431

Query: 381 SQMKN-SYPSPSLA 343
           SQ+ N SY S SL+
Sbjct: 432 SQLGNTSYSSSSLS 445


>emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
          Length = 473

 Score =  157 bits (396), Expect = 3e-36
 Identities = 82/134 (61%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
 Frame = -2

Query: 741 SGLSYYSQDTGFSGLPSSGRGLTGGPIITQVAQTMQIPLTYADDIIGVGGSKIAFIRRSS 562
           SGL  Y Q+ G SG+ SSG G  G PI+TQ+AQTMQIPL+YA+DIIG+GG+ IA+IRR+S
Sbjct: 328 SGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTS 387

Query: 561 GAVLTVQESMGLPDEITVEIKGTSSQVQAAQQLIQECVDNHRDVIPRSYGNTEPDLRSFY 382
           GA+LTVQES GLPDEITVEIKGTSS         QE + NH++ +P SYG  +  LRS Y
Sbjct: 388 GAILTVQESRGLPDEITVEIKGTSS---------QEFISNHKEPVPSSYGKMDSGLRSSY 438

Query: 381 SQMKN-SYPSPSLA 343
           SQ+ N SY S SL+
Sbjct: 439 SQLGNTSYSSSSLS 452


>ref|XP_004168950.1| PREDICTED: uncharacterized protein LOC101231198, partial [Cucumis
           sativus]
          Length = 323

 Score =  155 bits (391), Expect = 1e-35
 Identities = 88/140 (62%), Positives = 106/140 (75%), Gaps = 5/140 (3%)
 Frame = -2

Query: 747 SLSGLSYYSQDTGFSGLPSSGRGLTGGPIITQVAQTMQIPLTYADDIIGVGGSKIAFIRR 568
           S SG+S Y QD     + SSG G +GGPI+TQV QTMQIPL+YA+DIIGVGG+ IAFIRR
Sbjct: 164 SSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRR 223

Query: 567 SSGAVLTVQESMGLPDEITVEIKGTSSQVQAAQQLIQECVDNHRD-VIPRSYGNTE-PDL 394
           +SGA+LT+QES GLPDEITVEIKGTSSQVQ AQQLIQE V+  ++ V   SYG  +   L
Sbjct: 224 NSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGRLDTTGL 283

Query: 393 RSFYSQMK---NSYPSPSLA 343
           RS YSQ+    +S+ S SL+
Sbjct: 284 RSSYSQLAASGSSFTSSSLS 303


>ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
           [Cucumis sativus]
          Length = 468

 Score =  154 bits (390), Expect = 1e-35
 Identities = 85/138 (61%), Positives = 103/138 (74%), Gaps = 3/138 (2%)
 Frame = -2

Query: 747 SLSGLSYYSQDTGFSGLPSSGRGLTGGPIITQVAQTMQIPLTYADDIIGVGGSKIAFIRR 568
           S SG+S Y QD     + SSG G +GGPI+TQV QTMQIPL+YA+DIIGVGG+ IAFIRR
Sbjct: 311 SSSGISLYGQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRR 370

Query: 567 SSGAVLTVQESMGLPDEITVEIKGTSSQVQAAQQLIQECVDNHRDVIPRSYGNTEPDLRS 388
           +SGA+LT+QES GLPDEITVEIKGTSSQVQ AQQLIQE V+  ++ +  S       LRS
Sbjct: 371 NSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVTSSSYGRLXGLRS 430

Query: 387 FYSQMK---NSYPSPSLA 343
            YSQ+    +S+ S SL+
Sbjct: 431 SYSQLAASGSSFTSSSLS 448


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