BLASTX nr result

ID: Bupleurum21_contig00009375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009375
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280707.1| PREDICTED: glycine cleavage system H protein...   147   1e-33
emb|CAN76620.1| hypothetical protein VITISV_038357 [Vitis vinifera]   145   3e-33
emb|CAB16914.1| H-Protein precursor [Flaveria pringlei]               145   3e-33
emb|CAA85759.1| H-protein [Flaveria pringlei]                         145   3e-33
emb|CAB16710.1| H protein [Flaveria anomala]                          144   7e-33

>ref|XP_002280707.1| PREDICTED: glycine cleavage system H protein, mitochondrial isoform
           1 [Vitis vinifera] gi|297742112|emb|CBI33899.3| unnamed
           protein product [Vitis vinifera]
          Length = 165

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = -3

Query: 273 FGSVESVKATSDVNSPISGEVVEVNTKLNDTPGLINSSPYEGGWMIKVKPSNPSELESLM 94
           FG+VESVKATSDVNSPISGEVVEVN+KL++ PGLINSSPYE GWMIKVKPSNPSELESLM
Sbjct: 90  FGAVESVKATSDVNSPISGEVVEVNSKLSEAPGLINSSPYEDGWMIKVKPSNPSELESLM 149

Query: 93  GPKEYTKFCEEEDAAH 46
           GPKEYTKFCEEEDAAH
Sbjct: 150 GPKEYTKFCEEEDAAH 165


>emb|CAN76620.1| hypothetical protein VITISV_038357 [Vitis vinifera]
          Length = 165

 Score =  145 bits (366), Expect = 3e-33
 Identities = 68/76 (89%), Positives = 74/76 (97%)
 Frame = -3

Query: 273 FGSVESVKATSDVNSPISGEVVEVNTKLNDTPGLINSSPYEGGWMIKVKPSNPSELESLM 94
           FG+VESVKATSD+NSPISGEVVEVN+KL+++PGLINSSPYE GWMIKVKP NPSELESLM
Sbjct: 90  FGAVESVKATSDINSPISGEVVEVNSKLSESPGLINSSPYEDGWMIKVKPGNPSELESLM 149

Query: 93  GPKEYTKFCEEEDAAH 46
           GPKEYTKFCEEEDAAH
Sbjct: 150 GPKEYTKFCEEEDAAH 165


>emb|CAB16914.1| H-Protein precursor [Flaveria pringlei]
          Length = 162

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/76 (90%), Positives = 73/76 (96%)
 Frame = -3

Query: 273 FGSVESVKATSDVNSPISGEVVEVNTKLNDTPGLINSSPYEGGWMIKVKPSNPSELESLM 94
           FG+VESVKATSDVNSPISGE+VEVNTKL++TPGLINSSPYE GWMIKVKPSNPSELESLM
Sbjct: 87  FGAVESVKATSDVNSPISGEIVEVNTKLSETPGLINSSPYEDGWMIKVKPSNPSELESLM 146

Query: 93  GPKEYTKFCEEEDAAH 46
           G KEYTKFCEEED AH
Sbjct: 147 GAKEYTKFCEEEDTAH 162


>emb|CAA85759.1| H-protein [Flaveria pringlei]
          Length = 161

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/76 (90%), Positives = 73/76 (96%)
 Frame = -3

Query: 273 FGSVESVKATSDVNSPISGEVVEVNTKLNDTPGLINSSPYEGGWMIKVKPSNPSELESLM 94
           FG+VESVKATSDVNSPISGE+VEVNTKL++TPGLINSSPYE GWMIKVKPSNPSELESLM
Sbjct: 86  FGAVESVKATSDVNSPISGEIVEVNTKLSETPGLINSSPYEDGWMIKVKPSNPSELESLM 145

Query: 93  GPKEYTKFCEEEDAAH 46
           G KEYTKFCEEED AH
Sbjct: 146 GAKEYTKFCEEEDTAH 161


>emb|CAB16710.1| H protein [Flaveria anomala]
          Length = 162

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/76 (89%), Positives = 74/76 (97%)
 Frame = -3

Query: 273 FGSVESVKATSDVNSPISGEVVEVNTKLNDTPGLINSSPYEGGWMIKVKPSNPSELESLM 94
           FG+VESVKATSDVNSPISGE+VEVN+KL++TPGLINSSPYE GWMIKVKPSNPSEL+SLM
Sbjct: 87  FGAVESVKATSDVNSPISGEIVEVNSKLSETPGLINSSPYEDGWMIKVKPSNPSELDSLM 146

Query: 93  GPKEYTKFCEEEDAAH 46
           G KEYTKFCEEEDAAH
Sbjct: 147 GAKEYTKFCEEEDAAH 162


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