BLASTX nr result

ID: Bupleurum21_contig00009366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009366
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   189   3e-46
ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]   188   3e-46
gb|AFW70820.1| putative RNA helicase family protein [Zea mays]        188   3e-46
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   188   3e-46

>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1177

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/109 (86%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 FEDCTGPDTVIKYMTDGMLMREILIDENLSQYSVIMLDEAHERTIHTDVLFGXXXXXXXX 148
           FEDCTGPDTVIKYMTDGML+REILIDENLSQYSVIMLDEAHERTIHTDVLFG        
Sbjct: 607 FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKR 666

Query: 147 XXXXXXIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 1
                 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY
Sbjct: 667 RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 715


>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/109 (86%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 FEDCTGPDTVIKYMTDGMLMREILIDENLSQYSVIMLDEAHERTIHTDVLFGXXXXXXXX 148
           FEDCTGPDTVIKYMTDGML+REILIDENLSQYSVIMLDEAHERTIHTDVLFG        
Sbjct: 601 FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLVKR 660

Query: 147 XXXXXXIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 1
                 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY
Sbjct: 661 RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 709


>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
          Length = 1240

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/109 (85%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 FEDCTGPDTVIKYMTDGMLMREILIDENLSQYSVIMLDEAHERTIHTDVLFGXXXXXXXX 148
           FEDCTGPDTVIKYMTDGML+REIL+DENLSQYSVIMLDEAHERTIHTDVLFG        
Sbjct: 670 FEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLIKR 729

Query: 147 XXXXXXIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 1
                 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY
Sbjct: 730 RSDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 778


>gb|AFW70820.1| putative RNA helicase family protein [Zea mays]
          Length = 1236

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/109 (85%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 FEDCTGPDTVIKYMTDGMLMREILIDENLSQYSVIMLDEAHERTIHTDVLFGXXXXXXXX 148
           FEDCTGPDTVIKYMTDGML+REIL+DENLSQYSVIMLDEAHERTIHTDVLFG        
Sbjct: 666 FEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLIKR 725

Query: 147 XXXXXXIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 1
                 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY
Sbjct: 726 RSDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 774


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 1197

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/109 (85%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 FEDCTGPDTVIKYMTDGMLMREILIDENLSQYSVIMLDEAHERTIHTDVLFGXXXXXXXX 148
           FEDCTGPDTVIKYMTDGML+REIL+DENLSQYSVIMLDEAHERTIHTDVLFG        
Sbjct: 627 FEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKR 686

Query: 147 XXXXXXIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 1
                 IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY
Sbjct: 687 RPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 735


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