BLASTX nr result

ID: Bupleurum21_contig00009362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009362
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509510.1| ribonucleoside-diphosphate reductase small c...   241   4e-62
ref|XP_004145693.1| PREDICTED: ribonucleoside-diphosphate reduct...   240   8e-62
ref|XP_003553928.1| PREDICTED: ribonucleoside-diphosphate reduct...   240   8e-62
gb|AFK39938.1| unknown [Medicago truncatula]                          239   1e-61
ref|XP_004159139.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleosi...   238   3e-61

>ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis] gi|223549409|gb|EEF50897.1|
           ribonucleoside-diphosphate reductase small chain,
           putative [Ricinus communis]
          Length = 329

 Score =  241 bits (615), Expect = 4e-62
 Identities = 116/127 (91%), Positives = 121/127 (95%)
 Frame = +3

Query: 48  MPAFPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNVHWETLTDGE 227
           MPA PEEPLLAPNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQD  HWE+LT  E
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWESLTPDE 60

Query: 228 KHFITHVLAFFAASDGIVLENLAGRFMNDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 407
           KHFI+HVLAFFAASDGIVLENLAGRFM +VQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 408 IKDSDEK 428
           IKDS+EK
Sbjct: 121 IKDSNEK 127


>ref|XP_004145693.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
           [Cucumis sativus]
          Length = 329

 Score =  240 bits (613), Expect = 8e-62
 Identities = 114/127 (89%), Positives = 120/127 (94%)
 Frame = +3

Query: 48  MPAFPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNVHWETLTDGE 227
           MP+ P+EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD  HW++LT  E
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60

Query: 228 KHFITHVLAFFAASDGIVLENLAGRFMNDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 407
           KHFITHVLAFFAASDGIVLENLAGRFM +VQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120

Query: 408 IKDSDEK 428
           IKDS+EK
Sbjct: 121 IKDSNEK 127


>ref|XP_003553928.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
           [Glycine max]
          Length = 329

 Score =  240 bits (613), Expect = 8e-62
 Identities = 112/127 (88%), Positives = 121/127 (95%)
 Frame = +3

Query: 48  MPAFPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNVHWETLTDGE 227
           MP+ PEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD  HW++LTDGE
Sbjct: 1   MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60

Query: 228 KHFITHVLAFFAASDGIVLENLAGRFMNDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 407
           +HF+THVLAFFAASDGIVLENLAGRF  ++Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  RHFVTHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 408 IKDSDEK 428
           IKDSD+K
Sbjct: 121 IKDSDQK 127


>gb|AFK39938.1| unknown [Medicago truncatula]
          Length = 330

 Score =  239 bits (611), Expect = 1e-61
 Identities = 113/127 (88%), Positives = 120/127 (94%)
 Frame = +3

Query: 48  MPAFPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNVHWETLTDGE 227
           MPAFPEEPLLAPNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLS D  HW+ LTDGE
Sbjct: 1   MPAFPEEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSSDLKHWQNLTDGE 60

Query: 228 KHFITHVLAFFAASDGIVLENLAGRFMNDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 407
           +HFI+HVLAFFAASDGIVLENLAGRFM ++QV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  RHFISHVLAFFAASDGIVLENLAGRFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 408 IKDSDEK 428
           I DS EK
Sbjct: 121 ISDSAEK 127


>ref|XP_004159139.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
           reductase small chain-like [Cucumis sativus]
          Length = 329

 Score =  238 bits (608), Expect = 3e-61
 Identities = 113/127 (88%), Positives = 119/127 (93%)
 Frame = +3

Query: 48  MPAFPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNVHWETLTDGE 227
           MP+ P+EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD  HW++LT  E
Sbjct: 1   MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60

Query: 228 KHFITHVLAFFAASDGIVLENLAGRFMNDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 407
           KHFITHVLAFFAASDGIVLENLAGRFM + QVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFITHVLAFFAASDGIVLENLAGRFMKEXQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120

Query: 408 IKDSDEK 428
           IKDS+EK
Sbjct: 121 IKDSNEK 127


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