BLASTX nr result

ID: Bupleurum21_contig00009348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009348
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319304.1| predicted protein [Populus trichocarpa] gi|2...   389   e-106
ref|XP_003551889.1| PREDICTED: transmembrane protein 189-like [G...   383   e-104
ref|XP_003600055.1| Transmembrane protein [Medicago truncatula] ...   382   e-104
ref|XP_002280983.1| PREDICTED: transmembrane protein 189 [Vitis ...   382   e-103
ref|XP_003530742.1| PREDICTED: transmembrane protein 189-like [G...   380   e-103

>ref|XP_002319304.1| predicted protein [Populus trichocarpa] gi|222857680|gb|EEE95227.1|
            predicted protein [Populus trichocarpa]
          Length = 303

 Score =  389 bits (1000), Expect = e-106
 Identities = 195/309 (63%), Positives = 231/309 (74%), Gaps = 3/309 (0%)
 Frame = -3

Query: 1116 MSTLTQNNIFQYRSLGHRVPYFSLPRSISCSVTT---KPNRNANQLHINEPAVDVHLKKL 946
            MS L Q+N    RS  H  P+    + I CS TT   KP  + NQL      V       
Sbjct: 1    MSILPQHNHCLTRSPAHN-PWHR--KRIICSATTTPTKPKSSPNQLTFEPQFV------- 50

Query: 945  PTKPVVLTSPSARPKGRVILDDPNLKSTWSHRAWVACGSTVVIISLAECISGAMALDIWF 766
             T P ++TS S  P    +L+DP+L+STWSHR WVA G T V++SLA+ I+GA    IW 
Sbjct: 51   -TPPNLVTSISTPP----VLNDPSLQSTWSHRTWVATGCTTVLVSLAKAIAGAGHSHIWL 105

Query: 765  QPLVASFVGYLLADLGSGVYHWGIDNYGDASTPIFGSQIEAFQGHHKFPWTITKRQFANN 586
            +P++A ++GY+LADLGSGVYHWGIDNYGD STPIFG+QIEAFQGHHK+PWTIT+RQFANN
Sbjct: 106  EPMLAGYIGYILADLGSGVYHWGIDNYGDGSTPIFGNQIEAFQGHHKWPWTITRRQFANN 165

Query: 585  LHALASAITFAVLPMNLVFYNHPVLLGFVGTCSGCIMFSQQFHAWAHGTKSKLPPLVVAL 406
            LHALA  + F VLP++LV  N P +  FVG CSGCIMFSQQFHAWAHGTKSKLPP+VVAL
Sbjct: 166  LHALARTVAFFVLPVDLV-CNDPTVNAFVGVCSGCIMFSQQFHAWAHGTKSKLPPIVVAL 224

Query: 405  QDAGVLVSRSQHAAHHREPYNNNYCIVSGVWNQFLDQLQVFETLEMILFFKFGVRPRSWS 226
            QD G+LVSRSQH AHHR+PYNNNYCIVSGVWN+FLD+ +VFE LEM L+FK GVRPRSWS
Sbjct: 225  QDVGLLVSRSQHGAHHRQPYNNNYCIVSGVWNEFLDKNKVFEALEMALYFKLGVRPRSWS 284

Query: 225  APDHEWTQE 199
             P  +WT+E
Sbjct: 285  EPTTDWTEE 293


>ref|XP_003551889.1| PREDICTED: transmembrane protein 189-like [Glycine max]
          Length = 309

 Score =  383 bits (983), Expect = e-104
 Identities = 183/279 (65%), Positives = 222/279 (79%)
 Frame = -3

Query: 1035 ISCSVTTKPNRNANQLHINEPAVDVHLKKLPTKPVVLTSPSARPKGRVILDDPNLKSTWS 856
            + CS TT  +R+      N   + +    +P  P V+T+ + RP      +DP+L+STWS
Sbjct: 30   VFCSTTTTTSRDKP----NPKPLVIEPWLVPVPPTVVTADNPRPMN----NDPSLQSTWS 81

Query: 855  HRAWVACGSTVVIISLAECISGAMALDIWFQPLVASFVGYLLADLGSGVYHWGIDNYGDA 676
            HRAWVA G T ++ISL E I GAM L++W +P++A +VGY+LADLGSGVYHW IDNYGDA
Sbjct: 82   HRAWVAAGCTTLLISLGESIKGAMDLNMWAEPILAGWVGYILADLGSGVYHWAIDNYGDA 141

Query: 675  STPIFGSQIEAFQGHHKFPWTITKRQFANNLHALASAITFAVLPMNLVFYNHPVLLGFVG 496
            S PI G+QIEAFQGHHK+PWTITKRQFANNLHALA A+TF VLP+ L+ ++ P++ GFVG
Sbjct: 142  SIPIVGTQIEAFQGHHKWPWTITKRQFANNLHALARAVTFTVLPIVLLCHD-PIVEGFVG 200

Query: 495  TCSGCIMFSQQFHAWAHGTKSKLPPLVVALQDAGVLVSRSQHAAHHREPYNNNYCIVSGV 316
             CSGCIMFSQQFHAW+HGTKS+LPPLVVALQ+AGVLVSRSQHAAHHR PYNNNYCIVSGV
Sbjct: 201  MCSGCIMFSQQFHAWSHGTKSRLPPLVVALQEAGVLVSRSQHAAHHRPPYNNNYCIVSGV 260

Query: 315  WNQFLDQLQVFETLEMILFFKFGVRPRSWSAPDHEWTQE 199
            WN+FLD+ +VFE LEM+L+FK GVRPRSWS    EW +E
Sbjct: 261  WNEFLDKHKVFEALEMVLYFKTGVRPRSWSETASEWIEE 299


>ref|XP_003600055.1| Transmembrane protein [Medicago truncatula]
            gi|355489103|gb|AES70306.1| Transmembrane protein
            [Medicago truncatula]
          Length = 312

 Score =  382 bits (982), Expect = e-104
 Identities = 183/288 (63%), Positives = 221/288 (76%), Gaps = 9/288 (3%)
 Frame = -3

Query: 1035 ISCSVTT---------KPNRNANQLHINEPAVDVHLKKLPTKPVVLTSPSARPKGRVILD 883
            ++CS TT         K   NANQL I EP       KL   P+ + + + RP      +
Sbjct: 29   VNCSATTTTDTPTTATKSKPNANQLII-EP-------KLARPPIKVVTDANRPMD----N 76

Query: 882  DPNLKSTWSHRAWVACGSTVVIISLAECISGAMALDIWFQPLVASFVGYLLADLGSGVYH 703
            DP+L+STWSHRAWV  G T ++ISL E I G++ +++W +P+VA ++GY+LADLGSGVYH
Sbjct: 77   DPSLESTWSHRAWVTVGCTTLLISLGESIKGSVDMNMWVEPIVAGWIGYILADLGSGVYH 136

Query: 702  WGIDNYGDASTPIFGSQIEAFQGHHKFPWTITKRQFANNLHALASAITFAVLPMNLVFYN 523
            W IDNYGD STP+ G QIEAFQGHHK+PWTITKRQFANNLH+LA  +TF VLP+NLVF++
Sbjct: 137  WAIDNYGDESTPLVGGQIEAFQGHHKWPWTITKRQFANNLHSLARMVTFVVLPINLVFHD 196

Query: 522  HPVLLGFVGTCSGCIMFSQQFHAWAHGTKSKLPPLVVALQDAGVLVSRSQHAAHHREPYN 343
             P++  FVG C+GCIMFSQQFHAWAHGTKS+LPPLVVALQD GVLVSRSQH AHHR PYN
Sbjct: 197  -PIVQSFVGVCAGCIMFSQQFHAWAHGTKSRLPPLVVALQDGGVLVSRSQHGAHHRPPYN 255

Query: 342  NNYCIVSGVWNQFLDQLQVFETLEMILFFKFGVRPRSWSAPDHEWTQE 199
            NNYCIVSGVWN+FLD+ + FE +EMIL+FK GVRPRSWS P  EW +E
Sbjct: 256  NNYCIVSGVWNEFLDKTKAFEVMEMILYFKLGVRPRSWSEPSSEWIEE 303


>ref|XP_002280983.1| PREDICTED: transmembrane protein 189 [Vitis vinifera]
          Length = 307

 Score =  382 bits (980), Expect = e-103
 Identities = 187/284 (65%), Positives = 219/284 (77%), Gaps = 2/284 (0%)
 Frame = -3

Query: 1044 PRSISCSVTT--KPNRNANQLHINEPAVDVHLKKLPTKPVVLTSPSARPKGRVILDDPNL 871
            P  + CS T+  K    A+QL I EP         P  P    +P A+   R  + DP+L
Sbjct: 28   PALVHCSATSTAKAKHKADQLVI-EPR--------PLTP----TPIAKTPDRPSIKDPDL 74

Query: 870  KSTWSHRAWVACGSTVVIISLAECISGAMALDIWFQPLVASFVGYLLADLGSGVYHWGID 691
             STW HRAWVA G T V+ISL +C +G+    +W +P++A  +GY+LADLGSGVYHWGID
Sbjct: 75   LSTWPHRAWVASGCTTVLISLLKCATGSAHSHMWLEPVLAGLIGYVLADLGSGVYHWGID 134

Query: 690  NYGDASTPIFGSQIEAFQGHHKFPWTITKRQFANNLHALASAITFAVLPMNLVFYNHPVL 511
            NYGDASTP+FGSQIEAFQGHHK+PWTI +RQFANNLHALA A+TF VLP++LVF N PV+
Sbjct: 135  NYGDASTPVFGSQIEAFQGHHKWPWTIIRRQFANNLHALARAVTFTVLPLDLVF-NDPVV 193

Query: 510  LGFVGTCSGCIMFSQQFHAWAHGTKSKLPPLVVALQDAGVLVSRSQHAAHHREPYNNNYC 331
             GFV  CSGCIMFSQQFHAWAHGTKS+LPPLVVALQDAG+LVSRSQHAAHH  PYNNNYC
Sbjct: 194  HGFVWVCSGCIMFSQQFHAWAHGTKSRLPPLVVALQDAGLLVSRSQHAAHHHAPYNNNYC 253

Query: 330  IVSGVWNQFLDQLQVFETLEMILFFKFGVRPRSWSAPDHEWTQE 199
            IVSGVWN+FLD+ +VFE LEMILFF+ GVRPRSWS P+  W +E
Sbjct: 254  IVSGVWNEFLDENKVFEALEMILFFQLGVRPRSWSEPNFGWIEE 297


>ref|XP_003530742.1| PREDICTED: transmembrane protein 189-like [Glycine max]
          Length = 315

 Score =  380 bits (975), Expect = e-103
 Identities = 179/283 (63%), Positives = 222/283 (78%), Gaps = 1/283 (0%)
 Frame = -3

Query: 1044 PRSISCSVTTKPNRNA-NQLHINEPAVDVHLKKLPTKPVVLTSPSARPKGRVILDDPNLK 868
            P  + CS TT     + ++ +     ++  L  +P  P V+T+   RP      +DP+L+
Sbjct: 26   PSRVHCSTTTTTTTTSRSKSNAKSLVIETRLVPVPPMPTVVTTEIHRPMN----NDPSLQ 81

Query: 867  STWSHRAWVACGSTVVIISLAECISGAMALDIWFQPLVASFVGYLLADLGSGVYHWGIDN 688
            STWSHRAWVA G + ++ISL E I GA+ L++W +P+VA +VGY+LADLGSGVYHW IDN
Sbjct: 82   STWSHRAWVAAGCSTLVISLGESIKGAIDLNMWVEPIVAGWVGYILADLGSGVYHWAIDN 141

Query: 687  YGDASTPIFGSQIEAFQGHHKFPWTITKRQFANNLHALASAITFAVLPMNLVFYNHPVLL 508
            YGD STPI G+QIEAFQGHHK+PWTIT+RQFANNLHALA A+T AVLP+ L+ ++ P++ 
Sbjct: 142  YGDGSTPIVGAQIEAFQGHHKWPWTITRRQFANNLHALARAVTLAVLPVVLLCHD-PIVE 200

Query: 507  GFVGTCSGCIMFSQQFHAWAHGTKSKLPPLVVALQDAGVLVSRSQHAAHHREPYNNNYCI 328
            GFV  CSGCIMFSQQFHAW+HGTKS+LPPLVVALQ+AGVLVSR QHAAHHR PYNNNYCI
Sbjct: 201  GFVVVCSGCIMFSQQFHAWSHGTKSRLPPLVVALQEAGVLVSRWQHAAHHRAPYNNNYCI 260

Query: 327  VSGVWNQFLDQLQVFETLEMILFFKFGVRPRSWSAPDHEWTQE 199
            VSGVWN+FLD+ +VFE +EM+L+FK GVRPRSWS P  EW +E
Sbjct: 261  VSGVWNEFLDKHKVFEAMEMVLYFKTGVRPRSWSEPAPEWVEE 303


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