BLASTX nr result

ID: Bupleurum21_contig00009327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009327
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526718.1| nucleic acid binding protein, putative [Rici...   175   7e-42
ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|2...   173   4e-41
gb|ADL36655.1| C3HL domain class transcription factor [Malus x d...   172   6e-41
ref|XP_002526717.1| nucleic acid binding protein, putative [Rici...   172   6e-41
ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [...   170   2e-40

>ref|XP_002526718.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533907|gb|EEF35632.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 728

 Score =  175 bits (444), Expect = 7e-42
 Identities = 86/131 (65%), Positives = 101/131 (77%)
 Frame = -1

Query: 663 AANNDYEAFKTSVEQDSLTIDEVGLWYVRKKSSKQIVLEQRTPLMVAATYGSLDVVKFII 484
           AANND E FK ++E+D   +DE+GLWY R+K SKQ+V E RTPLMVAATYGS+DV+K I+
Sbjct: 49  AANNDIEGFKRTIERDPSCVDEIGLWYGRRKGSKQMVNEHRTPLMVAATYGSIDVIKLIL 108

Query: 483 SQPAVDVNRACGLDKCTALHCAASGGAVNAVDIVKLLLAVGADPNIKDSYDQRAVDVIFA 304
           S    DVNR+CGLDK TALHC ASGGAVNAVD+VKLLLA GADPN  D+   R +DVI  
Sbjct: 109 SSSDADVNRSCGLDKSTALHCVASGGAVNAVDVVKLLLAAGADPNSIDANGHRPIDVIVV 168

Query: 303 HPKVRGVKAIL 271
            PK+ GVK  L
Sbjct: 169 PPKLDGVKFAL 179


>ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|222854014|gb|EEE91561.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score =  173 bits (438), Expect = 4e-41
 Identities = 84/131 (64%), Positives = 104/131 (79%)
 Frame = -1

Query: 663 AANNDYEAFKTSVEQDSLTIDEVGLWYVRKKSSKQIVLEQRTPLMVAATYGSLDVVKFII 484
           AANND E FK S+E+D   +DE+GLWY RKK SKQ+V E RTPLMVA+TYGS+DV+K I+
Sbjct: 49  AANNDVEGFKQSIERDLSCVDEIGLWYGRKKGSKQMVNEHRTPLMVASTYGSIDVIKVIL 108

Query: 483 SQPAVDVNRACGLDKCTALHCAASGGAVNAVDIVKLLLAVGADPNIKDSYDQRAVDVIFA 304
           S   VDVNR+CG++K TALHCAASGGAVNAVD+VKLLLA GAD N+ D+   R +DVI  
Sbjct: 109 SLSYVDVNRSCGVEKSTALHCAASGGAVNAVDVVKLLLAAGADCNLADANGHRPIDVIVV 168

Query: 303 HPKVRGVKAIL 271
            PK++ V+ +L
Sbjct: 169 PPKLQDVRLVL 179


>gb|ADL36655.1| C3HL domain class transcription factor [Malus x domestica]
          Length = 736

 Score =  172 bits (436), Expect = 6e-41
 Identities = 85/131 (64%), Positives = 101/131 (77%)
 Frame = -1

Query: 663 AANNDYEAFKTSVEQDSLTIDEVGLWYVRKKSSKQIVLEQRTPLMVAATYGSLDVVKFII 484
           AANND E+FK S+EQD   IDE+GLWY R+K SKQ+V EQRTPLMVAATYGS+DV+K I+
Sbjct: 49  AANNDIESFKRSIEQDPSAIDEIGLWYCRQKGSKQMVNEQRTPLMVAATYGSIDVMKLIL 108

Query: 483 SQPAVDVNRACGLDKCTALHCAASGGAVNAVDIVKLLLAVGADPNIKDSYDQRAVDVIFA 304
           S    DVN+ACG D+ TALHCAASGGA NAVD VKLLL  GADPN+ D+   R +DVI  
Sbjct: 109 SLSDADVNQACGRDRSTALHCAASGGAENAVDCVKLLLGAGADPNLLDANGHRPIDVIVV 168

Query: 303 HPKVRGVKAIL 271
            P+++ VK  L
Sbjct: 169 PPRLQNVKLAL 179


>ref|XP_002526717.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533906|gb|EEF35631.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 725

 Score =  172 bits (436), Expect = 6e-41
 Identities = 86/131 (65%), Positives = 100/131 (76%)
 Frame = -1

Query: 663 AANNDYEAFKTSVEQDSLTIDEVGLWYVRKKSSKQIVLEQRTPLMVAATYGSLDVVKFII 484
           AANND E FK S++++   +DEVGLWY RKK SKQ+V E RTPLMVAATYGS+DV+K I+
Sbjct: 49  AANNDVEGFKRSIKREPSCVDEVGLWYGRKKGSKQMVNELRTPLMVAATYGSIDVIKLIL 108

Query: 483 SQPAVDVNRACGLDKCTALHCAASGGAVNAVDIVKLLLAVGADPNIKDSYDQRAVDVIFA 304
           S    DVNR CGLD  TALHCAASGGAVNA D+VKLLLA GADPN+ D+   R +DVI  
Sbjct: 109 SLSDADVNRPCGLDNSTALHCAASGGAVNAGDVVKLLLAAGADPNLTDANGHRPIDVIVV 168

Query: 303 HPKVRGVKAIL 271
            PK+R VK  L
Sbjct: 169 PPKLRNVKFTL 179


>ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type
           [Medicago truncatula] gi|355500172|gb|AES81375.1| Zinc
           finger CCCH domain-containing protein [Medicago
           truncatula]
          Length = 734

 Score =  170 bits (431), Expect = 2e-40
 Identities = 86/128 (67%), Positives = 98/128 (76%)
 Frame = -1

Query: 663 AANNDYEAFKTSVEQDSLTIDEVGLWYVRKKSSKQIVLEQRTPLMVAATYGSLDVVKFII 484
           AANND E FK  +E D +++DEVGLWY R+K SKQ+V EQRTPLMVAATYGS+DV+K I 
Sbjct: 51  AANNDVEGFKRLIEYDPMSVDEVGLWYGRRKGSKQMVNEQRTPLMVAATYGSIDVMKLIF 110

Query: 483 SQPAVDVNRACGLDKCTALHCAASGGAVNAVDIVKLLLAVGADPNIKDSYDQRAVDVIFA 304
           S   VD+NR CGLDK TALHCAASGGA NAVD VKLLLA GADPN  D+   R +DVI  
Sbjct: 111 SLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGADPNSVDANGDRPIDVIVY 170

Query: 303 HPKVRGVK 280
            PK+  VK
Sbjct: 171 SPKLELVK 178


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