BLASTX nr result

ID: Bupleurum21_contig00009315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009315
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]   225   3e-57
ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852...   224   4e-57
ref|XP_002305420.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II tra...   207   5e-52
ref|XP_003522857.1| PREDICTED: uncharacterized protein LOC100807...   202   2e-50

>emb|CAN70933.1| hypothetical protein VITISV_032482 [Vitis vinifera]
          Length = 145

 Score =  225 bits (574), Expect = 3e-57
 Identities = 120/145 (82%), Positives = 121/145 (83%), Gaps = 3/145 (2%)
 Frame = -1

Query: 454 MDNIVDALNTAYQEFVXXXXXXXXAKEVSGGQDTAATDAALENFKQRWELFRVACDRAEE 275
           MDNIVDALN AYQEFV        AKE SG Q TAATDAALENFKQRWELFRVACD+AEE
Sbjct: 1   MDNIVDALNNAYQEFVSAAASVLEAKESSGAQKTAATDAALENFKQRWELFRVACDQAEE 60

Query: 274 FVESVKQRIGSECLVDEATGSVTGKPGQ---NGLPPISAVRLEQMSKAVRWLVIELQQGS 104
           FVESVKQRIGSECLVDEATGSV GKPGQ    GLPPISAVRLEQMSKAVRWLVIELQ GS
Sbjct: 61  FVESVKQRIGSECLVDEATGSVAGKPGQAVTTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 103 GTAGSASLSHPSAPFDARFHEDAGQ 29
           GTAG  S SH SAPFDARF EDA Q
Sbjct: 121 GTAGGPSHSHVSAPFDARFSEDAAQ 145


>ref|XP_003631633.1| PREDICTED: uncharacterized protein LOC100852787 [Vitis vinifera]
          Length = 145

 Score =  224 bits (572), Expect = 4e-57
 Identities = 120/145 (82%), Positives = 121/145 (83%), Gaps = 3/145 (2%)
 Frame = -1

Query: 454 MDNIVDALNTAYQEFVXXXXXXXXAKEVSGGQDTAATDAALENFKQRWELFRVACDRAEE 275
           MDNIVDALN AYQEFV        AKE SG Q TAATDAALENFKQRWELFRVACD+AEE
Sbjct: 1   MDNIVDALNNAYQEFVSAAASVLEAKESSGAQKTAATDAALENFKQRWELFRVACDQAEE 60

Query: 274 FVESVKQRIGSECLVDEATGSVTGKPGQ---NGLPPISAVRLEQMSKAVRWLVIELQQGS 104
           FVESVKQRIGSECLVDEATGSV GKPGQ    GLPPISAVRLEQMSKAVRWLVIELQ GS
Sbjct: 61  FVESVKQRIGSECLVDEATGSVAGKPGQAVTAGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 103 GTAGSASLSHPSAPFDARFHEDAGQ 29
           GTAG  S SH SAPFDARF EDA Q
Sbjct: 121 GTAGGPSHSHVSAPFDARFSEDAAQ 145


>ref|XP_002305420.1| predicted protein [Populus trichocarpa] gi|222848384|gb|EEE85931.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  213 bits (542), Expect = 1e-53
 Identities = 111/146 (76%), Positives = 123/146 (84%), Gaps = 4/146 (2%)
 Frame = -1

Query: 454 MDNIVDALNTAYQEFVXXXXXXXXAKEVSGGQDTAATDAALENFKQRWELFRVACDRAEE 275
           MD+IVD+LN AYQ+FV        AKE+SGGQ TAATD ALENFKQ+WELFRV+CD+AEE
Sbjct: 1   MDSIVDSLNNAYQDFVGAAANVLEAKELSGGQKTAATDVALENFKQKWELFRVSCDQAEE 60

Query: 274 FVESVKQRIGSECLVDEATGSVTGKPGQ---NGLPPISAVRLEQMSKAVRWLVIELQQGS 104
           FVESVKQR+GSECLVDEATGSV+G+ GQ    GLPPISAVRLEQMSKAVRWLVIELQ GS
Sbjct: 61  FVESVKQRVGSECLVDEATGSVSGRSGQGGVTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 103 GTA-GSASLSHPSAPFDARFHEDAGQ 29
           G A G+A  +HPSAPFDARF EDA Q
Sbjct: 121 GAAGGAAGHAHPSAPFDARFSEDAAQ 146


>ref|XP_004148855.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           32-like [Cucumis sativus]
           gi|449515353|ref|XP_004164714.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 32-like [Cucumis
           sativus]
          Length = 146

 Score =  207 bits (528), Expect = 5e-52
 Identities = 112/146 (76%), Positives = 119/146 (81%), Gaps = 4/146 (2%)
 Frame = -1

Query: 454 MDNIVDALNTAYQEFVXXXXXXXXAKEVSGGQDTAATDAALENFKQRWELFRVACDRAEE 275
           MD++VD+LN AYQEFV        A E SG Q TAATDAALENFKQ+WELFRVACD+AEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 274 FVESVKQRIGSECLVDEATGSVTGKPGQN---GLPPISAVRLEQMSKAVRWLVIELQQGS 104
           FVESVKQRIGSECLVDEATGS+ GK GQ+    LPPISAVRLEQMSKAVRWLVIELQ GS
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQSATTSLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 103 GTAGSASL-SHPSAPFDARFHEDAGQ 29
           G A SAS  SH SAPFDARF EDA Q
Sbjct: 121 GAAASASAHSHQSAPFDARFTEDATQ 146


>ref|XP_003522857.1| PREDICTED: uncharacterized protein LOC100807018 isoform 1 [Glycine
           max] gi|356508222|ref|XP_003522858.1| PREDICTED:
           uncharacterized protein LOC100807018 isoform 2 [Glycine
           max] gi|356508224|ref|XP_003522859.1| PREDICTED:
           uncharacterized protein LOC100807018 isoform 3 [Glycine
           max]
          Length = 146

 Score =  202 bits (515), Expect = 2e-50
 Identities = 111/147 (75%), Positives = 119/147 (80%), Gaps = 5/147 (3%)
 Frame = -1

Query: 454 MDNIVDALNTAYQEFVXXXXXXXXAKEVSGGQDTAATDAALENFKQRWELFRVACDRAEE 275
           MD+IVD+LN AYQ+FV        AKE +G   T ATD ALENFKQ+WELFRVACD+AEE
Sbjct: 1   MDSIVDSLNNAYQDFVAAAANVLEAKENAGSIKTMATDTALENFKQKWELFRVACDQAEE 60

Query: 274 FVESVKQRIGSECLVDEATGSVTGKPGQ---NGLPPISAVRLEQMSKAVRWLVIELQQGS 104
           FVESVKQRIGSECLVDEAT  V GKPGQ    GLPPISAVRLEQMSKAVRWLVIELQ GS
Sbjct: 61  FVESVKQRIGSECLVDEATRPVAGKPGQATMTGLPPISAVRLEQMSKAVRWLVIELQHGS 120

Query: 103 GTAGSA--SLSHPSAPFDARFHEDAGQ 29
           G AGSA  +L+HPSAPFDARF EDA Q
Sbjct: 121 G-AGSANSALTHPSAPFDARFSEDAAQ 146


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