BLASTX nr result

ID: Bupleurum21_contig00009297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009297
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310220.1| predicted protein [Populus trichocarpa] gi|2...   138   2e-30
ref|XP_002521580.1| conserved hypothetical protein [Ricinus comm...   128   2e-27
ref|XP_002327814.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
emb|CBI17537.3| unnamed protein product [Vitis vinifera]              124   4e-26
ref|XP_002270563.1| PREDICTED: putative F-box protein At3g23950 ...   124   4e-26

>ref|XP_002310220.1| predicted protein [Populus trichocarpa] gi|222853123|gb|EEE90670.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score =  138 bits (348), Expect = 2e-30
 Identities = 69/177 (38%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
 Frame = -1

Query: 666 DDKDQITMCRTYMYEMGDINGAHELPKL-----RKDLELKDLVKDYTLPFLPAKSLVRFR 502
           +D+    M  TY Y+      +    K      ++D++++D+V+ Y L FLPAKS+ RF+
Sbjct: 22  EDEGTHDMIPTYSYKSSSYKSSASCAKFPGHVKQEDIKIEDVVRQYALCFLPAKSICRFK 81

Query: 501 TVSKDWNKWITNPFLAHLQSFNFQEMSGFFCQ-EAFQHFFVPLDKSVYGVSSPALSFLPQ 325
           TVSK+W KWI +PF +H Q+ +F+ +SG FCQ       F+  +   YGVSSP L FLP+
Sbjct: 82  TVSKEWLKWIDSPFFSHKQTNHFKHVSGLFCQFPGESPSFISFNPVAYGVSSPTLRFLPE 141

Query: 324 RVKIRSSCKGLVLCQGIGDQGGENKYYVCNPTNGEYHVLPESSYYHDGVDPRTMVSV 154
            + +R+SC GL+ CQ    + G+N YY+CNP   E+ V+P+ + YH    P T +++
Sbjct: 142 PIDVRTSCNGLLGCQ---SRLGDNAYYICNPVTKEWRVVPKPTLYH---GPETAIAL 192


>ref|XP_002521580.1| conserved hypothetical protein [Ricinus communis]
           gi|223539258|gb|EEF40851.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  128 bits (322), Expect = 2e-27
 Identities = 62/144 (43%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
 Frame = -1

Query: 615 DINGAHELPKLRKDLELKDLVKDYTLPFLPAKSLVRFRTVSKDWNKWITNPFLAHLQSFN 436
           DI  + +  K+++ + + D+VK++ LPFL AKSL +FRTVSK W++WI +PF AH Q+ +
Sbjct: 69  DIAKSADNIKMQRGVGIGDIVKEHALPFLSAKSLCKFRTVSKQWDQWIISPFFAHKQTVH 128

Query: 435 FQEMSGFFCQEAFQ-HFFVPLDKSVYGVSSPALSFLPQRVKIRSSCKGLVLCQGIGDQGG 259
           ++ +SG F Q   +   F+  D++ +G+ S +LSFLP+ V IRSSC GLV CQG  +   
Sbjct: 129 YKNVSGLFRQLPGRCPSFISFDQAAFGIPSNSLSFLPEPVDIRSSCNGLVCCQGCDE--- 185

Query: 258 ENKYYVCNPTNGEYHVLPESSYYH 187
           +  YY+CNP   ++  LP    YH
Sbjct: 186 DQAYYICNPATKDWRKLPSPKLYH 209


>ref|XP_002327814.1| predicted protein [Populus trichocarpa] gi|222836899|gb|EEE75292.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  125 bits (315), Expect = 1e-26
 Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
 Frame = -1

Query: 573 LELKDLVKDYTLPFLPAKSLVRFRTVSKDWNKWITNPFLAHLQSFNFQEMSGFFCQ-EAF 397
           +E++D+V+ Y L FLPAKSL RF+TVSK+W +WI  PF  H Q+ +F+ +SG FCQ    
Sbjct: 1   MEIQDVVRQYALCFLPAKSLCRFKTVSKEWLRWINCPFFVHTQTNHFRHISGLFCQFPGE 60

Query: 396 QHFFVPLDKSVYGVSSPALSFLPQRVKIRSSCKGLVLCQGIGDQGGENKYYVCNPTNGEY 217
              F+ L+   YGV +P L FLP+ V  R+SC GL+ CQ    + G+N YY+CNP    +
Sbjct: 61  SPSFMSLNPVAYGVPNPTLCFLPEPVDARTSCNGLLGCQ---SRLGDNAYYICNPVTEGW 117

Query: 216 HVLPESSYYHDGVDPRTMVSVV-KIDVLEY 130
            ++P+ + YH    P T +++  + D+L +
Sbjct: 118 RMVPKPNLYH---GPETAIALAFEPDILNF 144


>emb|CBI17537.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score =  124 bits (310), Expect = 4e-26
 Identities = 65/139 (46%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
 Frame = -1

Query: 573 LELKDLVKDYTLPFLPAKSLVRFRTVSKDWNKWITNPFLAHLQSFNFQEMSGFFCQEAFQ 394
           ++LKD++++YTLPFLPAKSL RF  V +DW   I+ PF AH QS +F  +SG F Q A +
Sbjct: 75  MDLKDIIREYTLPFLPAKSLFRFTGVCRDWKMQISTPFFAHNQSNSFHAVSGLFYQIAGE 134

Query: 393 -HFFVPLDKSVYGVSSPALSFLPQRVKIRSSCKGLVLCQGIGDQGGENKYYVCNPTNGEY 217
              F+ LD   YGV  P+L FLP  V IR+SC GL+ CQ    + G+  YY+CNP    +
Sbjct: 135 PPSFISLDPKAYGVPDPSLKFLPVPVDIRASCNGLLCCQA---RTGDKAYYMCNPATKMW 191

Query: 216 HVLPESSYYHDGVDPRTMV 160
             LP+    H G DP  +V
Sbjct: 192 KKLPKPDADH-GTDPALVV 209


>ref|XP_002270563.1| PREDICTED: putative F-box protein At3g23950 [Vitis vinifera]
          Length = 357

 Score =  124 bits (310), Expect = 4e-26
 Identities = 65/139 (46%), Positives = 86/139 (61%), Gaps = 1/139 (0%)
 Frame = -1

Query: 573 LELKDLVKDYTLPFLPAKSLVRFRTVSKDWNKWITNPFLAHLQSFNFQEMSGFFCQEAFQ 394
           ++LKD++++YTLPFLPAKSL RF  V +DW   I+ PF AH QS +F  +SG F Q A +
Sbjct: 20  MDLKDIIREYTLPFLPAKSLFRFTGVCRDWKMQISTPFFAHNQSNSFHAVSGLFYQIAGE 79

Query: 393 -HFFVPLDKSVYGVSSPALSFLPQRVKIRSSCKGLVLCQGIGDQGGENKYYVCNPTNGEY 217
              F+ LD   YGV  P+L FLP  V IR+SC GL+ CQ    + G+  YY+CNP    +
Sbjct: 80  PPSFISLDPKAYGVPDPSLKFLPVPVDIRASCNGLLCCQA---RTGDKAYYMCNPATKMW 136

Query: 216 HVLPESSYYHDGVDPRTMV 160
             LP+    H G DP  +V
Sbjct: 137 KKLPKPDADH-GTDPALVV 154


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