BLASTX nr result

ID: Bupleurum21_contig00009283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009283
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...    62   5e-08
emb|CCH50966.1| T4.5 [Malus x robusta]                                 60   1e-07
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...    59   3e-07
emb|CAN72222.1| hypothetical protein VITISV_028929 [Vitis vinifera]    59   4e-07
emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]    59   4e-07

>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/51 (58%), Positives = 35/51 (68%)
 Frame = +3

Query: 18   HHSSDKLEARAIKTIFLGYPAYQKGYKLYDPITHSFHVSRHVIFDENVFPY 170
            H+   K   RA K+IFLGY    KGY LYDPI H F+VSR+VIF E VFP+
Sbjct: 1018 HNHRTKFAPRARKSIFLGYREGTKGYLLYDPIIHEFYVSRNVIFHEIVFPF 1068


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 23/54 (42%), Positives = 40/54 (74%)
 Frame = +3

Query: 9    YMYHHSSDKLEARAIKTIFLGYPAYQKGYKLYDPITHSFHVSRHVIFDENVFPY 170
            ++  +S DKL+ ++ + +FLGY     GY+ +DPI++  ++SRHV+FDE++FPY
Sbjct: 965  WLQPYSRDKLDFKSKQCVFLGYSLNHSGYRCWDPISNRLYISRHVVFDESLFPY 1018


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = +3

Query: 33   KLEARAIKTIFLGYPAYQKGYKLYDPITHSFHVSRHVIFDENVFPY 170
            KL  R+   +FLGYP Y KGY+ +DP+++   +SRHV+FDE+ FP+
Sbjct: 936  KLAPRSTMCVFLGYPLYHKGYRCFDPLSNRVIISRHVVFDEHSFPF 981


>emb|CAN72222.1| hypothetical protein VITISV_028929 [Vitis vinifera]
          Length = 651

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
 Frame = +3

Query: 6   AYMYHHSS--DKLEARAIKTIFLGYPAYQKGYKLYDPITHSFHVSRHVIFDEN--VFP 167
           A+++ HS   DKL+ RAIK +FLGY + QKGYK Y+P    F++S +V F EN  VFP
Sbjct: 144 AFVHLHSQHRDKLDPRAIKCVFLGYSSTQKGYKCYNPSARKFYISANVTFTENKPVFP 201


>emb|CAN65308.1| hypothetical protein VITISV_002323 [Vitis vinifera]
          Length = 1114

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/57 (52%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +3

Query: 3   LAYMYH-HSSDKLEARAIKTIFLGYPAYQKGYKLYDPITHSFHVSRHVIFDENVFPY 170
           LAY  + H   K   RA + IFLGYP  QK YKLYD  TH    SR V+F E +FPY
Sbjct: 621 LAYATNVHVPHKFAPRAKRCIFLGYPVXQKAYKLYDLDTHQMFTSRDVVFHETIFPY 677


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