BLASTX nr result

ID: Bupleurum21_contig00009277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009277
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875363.1| hypothetical protein ARALYDRAFT_904940 [Arab...    93   1e-16
ref|XP_002872473.1| hypothetical protein ARALYDRAFT_911262 [Arab...    77   7e-12
ref|XP_002872649.1| hypothetical protein ARALYDRAFT_911615 [Arab...    77   9e-12
ref|NP_001055053.1| Os05g0269100 [Oryza sativa Japonica Group] g...    77   9e-12
ref|XP_002872474.1| hypothetical protein ARALYDRAFT_911263 [Arab...    74   8e-11

>ref|XP_002875363.1| hypothetical protein ARALYDRAFT_904940 [Arabidopsis lyrata subsp.
            lyrata] gi|297321201|gb|EFH51622.1| hypothetical protein
            ARALYDRAFT_904940 [Arabidopsis lyrata subsp. lyrata]
          Length = 435

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 84/322 (26%), Positives = 147/322 (45%), Gaps = 21/322 (6%)
 Frame = +3

Query: 264  PDSLLVEILIRLPIKSLFRNKIICKHWLSLISHRSCARLYVLNRLNASYPFRIMYKY-VY 440
            PD +L EIL+++P+KS    K++CK W SL+        ++      S  + +++K+ + 
Sbjct: 12   PDMMLAEILVKIPLKSNTIVKLVCKRWKSLVESTIFRNHFLSLHQKKSCSWSVLHKHHIR 71

Query: 441  VSEFREVLRRLHPDVF-VARXXXXXXXXXXXXXXXXXXXKVL-SVSNGLVMFCMLGPLVY 614
            V+   E++     + + + R                    ++ ++SNGL++      ++Y
Sbjct: 72   VNTTHELIGFYGCEKWGLPRSLGSYISSPFSDAGIEIVSFIIKAISNGLLLILTQDYMIY 131

Query: 615  HVCDPVTGECVVLPRGKMNLMMNVPMFFAEGLVSRVNEDNRVIDYKVVRVECTYSEHKYL 794
             V +PV  E V +    ++L          GL +RV+E+  V+ YKVV V   +     L
Sbjct: 132  -VGNPVLREWVKIRPCTLSLKSYFQTI-KFGLATRVDENGVVLGYKVVLVNTRFENATNL 189

Query: 795  ALEVFSSDSGVWKLYRFNCPRKIRLLKRGC-GPINFNGILHWF-----EENGMVAFDPYR 956
             L+++SS++G W      CP  I         PI+ NG+LHWF        G++A D Y 
Sbjct: 190  TLQIYSSETGEWTCENVCCPCPIPWDSSPYPEPISVNGVLHWFGHGTINAGGIIAIDLYN 249

Query: 957  DI----NGCWLIPFPDG--MNIESERQHE-GLYRLCDVSQGKLRFFEVSPDPSELICFSI 1115
                  N CW IPFP+     ++ ++ ++    R C  S+G + +  +  +        +
Sbjct: 250  TSPLRENHCWFIPFPNENLFVVDGKKSYKIWCRRACTTSEGFIMYINMVSESK----MKV 305

Query: 1116 WVLN-NY---EKRE-WLLEFQV 1166
            W LN NY   E RE W L  ++
Sbjct: 306  WRLNKNYYEIESREYWQLSSEI 327


>ref|XP_002872473.1| hypothetical protein ARALYDRAFT_911262 [Arabidopsis lyrata subsp.
           lyrata] gi|297318310|gb|EFH48732.1| hypothetical protein
           ARALYDRAFT_911262 [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 58/238 (24%), Positives = 112/238 (47%), Gaps = 16/238 (6%)
 Frame = +3

Query: 264 PDSLLVEILIRLPIKSLFRNKIICKHWLSLISHRSCARLY--VLNRLNASYPFRIMYKYV 437
           P+ +++ I++RLP++S+ R K++C+ W SL        LY  + N  ++++P        
Sbjct: 4   PEEMMINIIVRLPLQSIVRFKLVCREWKSLTESAFFNDLYQSISNSTSSNWPILHGSYRC 63

Query: 438 YVSEFREVLRRLHPDVFVARXXXXXXXXXXXXXXXXXXXK-----VLSVSNGLVMFCMLG 602
             S   EV   L  + +                      K     V++ ++GLV+ C+L 
Sbjct: 64  TTSYLEEVQLNLPREPWHGNSHNWSFTSGVIRKYTQNNNKIKEIWVVACADGLVLLCLLD 123

Query: 603 PLV---YHVCDPVTGECVVLPRGKMNLMMNVPMFFAEGLVSRVNEDNRVIDYKVVRVECT 773
             +   Y++ +P+  + + L       +     F   GLV+R++ +  ++ YKV+RV   
Sbjct: 124 EDMTKRYYIGNPMLQQWIQL--SPPPYLTQYHFFIDSGLVTRMH-NGALLSYKVIRV--- 177

Query: 774 YSEHKYL------ALEVFSSDSGVWKLYRFNCPRKIRLLKRGCGPINFNGILHWFEEN 929
           YSE ++L        +++SS+ G W +   +CP    + ++   P++ NG LHWF E+
Sbjct: 178 YSEARHLDVSRTWTFQIYSSEMGKWSVQHVSCPGD-GVSQQTSNPVSLNGKLHWFHES 234


>ref|XP_002872649.1| hypothetical protein ARALYDRAFT_911615 [Arabidopsis lyrata subsp.
            lyrata] gi|297318486|gb|EFH48908.1| hypothetical protein
            ARALYDRAFT_911615 [Arabidopsis lyrata subsp. lyrata]
          Length = 436

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 22/297 (7%)
 Frame = +3

Query: 264  PDSLLVEILIRLPIKSLFRNKIICKHWLSLISHRSCARLYVLNRLNASYPFRIMY---KY 434
            P+  LV+IL RL +K + R + +CK W S+I       LY   + ++S  + IM    K 
Sbjct: 11   PEEALVKILARLSLKYIARFRSVCKEWKSIIDSDFFRDLYESLKSSSSVSWSIMNTRNKR 70

Query: 435  VYVSEFREVLRRLHPDVFVARXXXXXXXXXXXXXXXXXXXKVLSVSNGLVMF---CMLGP 605
            V V    E++   H                           VLS ++G+V+     + G 
Sbjct: 71   VSV----EIVGH-HGCERWGLTNSLGSYMHHIPETKVRNNSVLSCTDGIVLLYTETVEGE 125

Query: 606  LVYHVCDPVTGECVVLPRGKMNLMMNVPM------FFAEGLVSRVNEDNRVIDYKVVRVE 767
            L+YHV +P+  + V +P        +V        F   GLV+++ E   V+ YKVV + 
Sbjct: 126  LMYHVGNPLLRQWVRIPLPPHLSAFDVVRLQENRHFSDNGLVTKM-EKGIVVGYKVVWML 184

Query: 768  CTYSEHKYLALEVFSSDSGVWKLYRFNCPRKIRLLKRGCGPINFNGILHWFEENG----- 932
             +Y   K L   ++SS++G+W   +  C R +   + G   +  NGILHW   +G     
Sbjct: 185  ASYPASKELTFMIYSSETGLWITKKVRCLRALLWSRLGYS-VPLNGILHWLAASGCSLDA 243

Query: 933  --MVAFDPYR---DINGCWLIPFPDGMNIESERQHEGLYRLCDVSQGKLRFFEVSPD 1088
              +V++D Y+   D   C +IPFP    I+   +++   R    S G + +  V  D
Sbjct: 244  DYVVSYDFYKGCDDDLDCNIIPFP---GIQRFERNQRFKRTITTSAGSVVYCNVFND 297


>ref|NP_001055053.1| Os05g0269100 [Oryza sativa Japonica Group] gi|55168092|gb|AAV43960.1|
            unknown protein [Oryza sativa Japonica Group]
            gi|113578604|dbj|BAF16967.1| Os05g0269100 [Oryza sativa
            Japonica Group] gi|125551605|gb|EAY97314.1| hypothetical
            protein OsI_19235 [Oryza sativa Indica Group]
            gi|215694713|dbj|BAG89904.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222630909|gb|EEE63041.1|
            hypothetical protein OsJ_17849 [Oryza sativa Japonica
            Group]
          Length = 431

 Score = 77.0 bits (188), Expect = 9e-12
 Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 10/308 (3%)
 Frame = +3

Query: 273  LLVEILIRLPIKSLFRNKIICKHWLSLISHRSCARLYVLNRLNASYPFRIMYKYVYVSE- 449
            +L+E+L+RLP  SL + + +CK WL   +  +    Y          + ++ + +++   
Sbjct: 26   ILIEVLLRLPPWSLCQLRCVCKLWLERTTSSTFLSAYAERHTTNPSNWFLLDRTIFIDTA 85

Query: 450  ------FREVLRRLHPD-VFVARXXXXXXXXXXXXXXXXXXXKVLSVSNGLVMFCMLGPL 608
                   R +LR   P  V                        V+S S GL++       
Sbjct: 86   PTPRGPIRALLRNSEPPKVSSIITSSRMCSIHRKESFYDQLPMVVSYSGGLILLTG-NEN 144

Query: 609  VYHVCDPVTGECVVLPRGKMNLMMNVPMFFAEGLVSRVNEDNRVIDYKVVRVECTYSEHK 788
             Y+VC+P TG+  +LP  K  L     +    G+V+R  E      Y V  +  +     
Sbjct: 145  NYYVCNPFTGDTFLLPVPKPQLRNAESL----GIVARDGE------YVVAELMMS----- 189

Query: 789  YLALEVFSSDSGVWKLYRFNCPRKIRLLKRGCGPINFNGILHWFEEN-GMVAFDPYRDIN 965
               L  FSS +G W+     CP+      RG    +  G+LHW + N G+++ DP+    
Sbjct: 190  --CLRSFSSVNGRWEEKPLVCPQ----FSRGDMVFSSGGMLHWVDLNCGILSCDPFASEP 243

Query: 966  GCWLIPFPDGMNIESERQHEGLY-RLCDVSQGKLRFFEVSPDPSELICFSIWVLNNYEKR 1142
                I  P+     +    E ++ R   VS G+L FF++  D  E    S+W L      
Sbjct: 244  TVLFINLPEASGRPTRGLDEWIHMRYVGVSAGRLCFFDIDEDDGESGSMSLWALGG-NSG 302

Query: 1143 EWLLEFQV 1166
            EW+LE++V
Sbjct: 303  EWVLEYKV 310


>ref|XP_002872474.1| hypothetical protein ARALYDRAFT_911263 [Arabidopsis lyrata subsp.
           lyrata] gi|297318311|gb|EFH48733.1| hypothetical protein
           ARALYDRAFT_911263 [Arabidopsis lyrata subsp. lyrata]
          Length = 417

 Score = 73.9 bits (180), Expect = 8e-11
 Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 14/236 (5%)
 Frame = +3

Query: 264 PDSLLVEILIRLPIKSLFRNKIICKHWLSLISHRSCARLYVLNR----LNASYPFRIMYK 431
           P+ L++ I+ RLP++S+ R K++CK W SL+       LY  N     L+ SY  R +  
Sbjct: 18  PEELVINIIARLPLQSIVRFKLVCKEWKSLMESAFFRDLYQSNSNWSILHGSY--RCINS 75

Query: 432 YVYVSEFR-EVLRRLHPDVFVARXXXXXXXXXXXXXXXXXXXKVLSVSNGLVMFCMLGPL 608
            +   E         H +                         V++ ++GLV+ C+L   
Sbjct: 76  CLEELELNLHGSESCHGNSQYWSFPSGLIHKYTQNNNKVKEIWVVACADGLVLICLLEED 135

Query: 609 V---YHVCDPVTGECVVLPRGKMNLMMNVPMFFAEGLVSRVNEDNRVIDYKVVRVECTYS 779
           +   Y++ +PV  + V L      L      F   GLV+R++ +  ++ YKV+RV   YS
Sbjct: 136 ITKRYYIGNPVLTQWVQLSSPPY-LPQYRYHFIDLGLVTRMH-NGALLGYKVIRV---YS 190

Query: 780 EHKYLAL------EVFSSDSGVWKLYRFNCPRKIRLLKRGCGPINFNGILHWFEEN 929
           E ++LA+      +++SSD+G W +   +CP +  +      P++ NG LHWF E+
Sbjct: 191 EARHLAVSRTWTFQIYSSDTGKWSVQHVSCPGQ-GVSPLTSNPVSLNGKLHWFHES 245


Top