BLASTX nr result
ID: Bupleurum21_contig00009273
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00009273 (536 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|2... 85 8e-15 ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vi... 82 7e-14 emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera] 82 7e-14 ref|XP_002531928.1| leucine-rich repeat-containing protein, puta... 81 1e-13 ref|XP_002527699.1| ATP binding protein, putative [Ricinus commu... 80 1e-13 >ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|222834747|gb|EEE73210.1| predicted protein [Populus trichocarpa] Length = 540 Score = 84.7 bits (208), Expect = 8e-15 Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 3/132 (2%) Frame = +3 Query: 3 LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKPLTE 182 LS V LPT+ DQLS LK L + CK L +LPQLP ++EL+ C SL++ Sbjct: 238 LSRNKFVSLPTSIDQLSGLKFLYMEDCKMLQSLPQLPPNLELLRVNGCTSLEKMQFSSNP 297 Query: 183 NNSTDLFFAFANCTKLHQLKTFNSLFTMLLP---QGHFDSCRNLSLFLPGSELPEFFKFQ 353 L F F NC +L + +N++F LL QG + S+F+PGSE+P +F Q Sbjct: 298 YKFNCLSFCFINCWRLSESDCWNNMFHTLLRKCFQGPPNLIEVFSVFIPGSEIPTWFSHQ 357 Query: 354 NKGDCLRFELPP 389 ++G + + PP Sbjct: 358 SEGSSVSVQTPP 369 >ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera] Length = 1291 Score = 81.6 bits (200), Expect = 7e-14 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 22/168 (13%) Frame = +3 Query: 3 LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKPLTE 182 LS + + +PT+ +L HL+RL + CKNL +LP+LPSSI+ + A DC SL+ F+ P + Sbjct: 980 LSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETFSYPSSA 1039 Query: 183 ---NNSTDLFFAFANCTK-------------LHQLKTFNSLFTMLLPQGHFDSCR----N 302 D F F+NC + L +++ S+ + P H S R Sbjct: 1040 YPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEIRLVASIQKSMAPSEH--SARYGESR 1097 Query: 303 LSLFLPGSELPEFFKFQNKGDCLRFELPP--LPSILKGFSIASVFTPK 440 +PGS +PE+F Q++GD + ELPP + G + +VF PK Sbjct: 1098 YDAVVPGSRIPEWFTHQSEGDSITVELPPGCYNTNSIGLAACAVFHPK 1145 >emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera] Length = 1414 Score = 81.6 bits (200), Expect = 7e-14 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 22/168 (13%) Frame = +3 Query: 3 LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKPLTE 182 LS + + +PT+ +L HL+RL + CKNL +LP+LPSSI+ + A DC SL+ F+ P + Sbjct: 953 LSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETFSYPSSA 1012 Query: 183 ---NNSTDLFFAFANCTK-------------LHQLKTFNSLFTMLLPQGHFDSCR----N 302 D F F+NC + L +++ S+ + P H S R Sbjct: 1013 YPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEIRLVASIQKSMAPSEH--SARYGESR 1070 Query: 303 LSLFLPGSELPEFFKFQNKGDCLRFELPP--LPSILKGFSIASVFTPK 440 +PGS +PE+F Q++GD + ELPP + G + +VF PK Sbjct: 1071 YDAVVPGSRIPEWFTHQSEGDSITVELPPGCYNTNSIGLAACAVFHPK 1118 >ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis] gi|223528407|gb|EEF30442.1| leucine-rich repeat-containing protein, putative [Ricinus communis] Length = 943 Score = 80.9 bits (198), Expect = 1e-13 Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 6/169 (3%) Frame = +3 Query: 3 LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKPLTE 182 LSG + + LP + +LS L+ L L C+NL ++ +PSS++L+ A C +L+ + L Sbjct: 630 LSGNNFISLPASVCRLSKLEHLYLDNCRNLQSMQAVPSSVKLLSAQACSALETLPETLDL 689 Query: 183 NNSTDLFFAFANCTKLHQLKTFNSLFTMLLP---QGHFDSCRNLSLFLPGSELPEFFKFQ 353 + F F NC KL + + N++ M+L QG + + +PGSE+P++ Q Sbjct: 690 SGLQSPRFNFTNCFKLVENQGCNNIGFMMLRNYLQGLSNPKPGFDIIIPGSEIPDWLSHQ 749 Query: 354 NKGDC-LRFELPPL--PSILKGFSIASVFTPKTTSSYQAKEIGIRCHMR 491 + GDC + ELPP+ S GF++ +V+ + ++ + C ++ Sbjct: 750 SLGDCSISIELPPVWCDSKWMGFALCAVYVIYQEPALNFIDMDLTCFIK 798 >ref|XP_002527699.1| ATP binding protein, putative [Ricinus communis] gi|223532930|gb|EEF34698.1| ATP binding protein, putative [Ricinus communis] Length = 908 Score = 80.5 bits (197), Expect = 1e-13 Identities = 54/146 (36%), Positives = 74/146 (50%), Gaps = 4/146 (2%) Frame = +3 Query: 3 LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKP--L 176 L G + +P + QL HLK L + C NL +LP+LPS IE V+A DC SL+ + P Sbjct: 642 LRGNNFSNIPGDIRQLFHLKLLDISSCSNLRSLPELPSHIEYVNAHDCTSLESVSIPSSF 701 Query: 177 TENNSTDLFFAFANCTKLHQLKTFNSLFTMLLPQGHFDSCRNLSLFLPGSELPEFFKFQN 356 T + F F NC KL+ NS F L G S + PGS++PE Q+ Sbjct: 702 TVSEWNRPMFLFTNCFKLNLSAFLNSQFIDLQESGLLPSA---GICFPGSKIPEQISHQS 758 Query: 357 KGDCLRFELPP--LPSILKGFSIASV 428 G L +LP S +GF++A+V Sbjct: 759 AGSLLTVQLPVHWSNSQFRGFALAAV 784