BLASTX nr result

ID: Bupleurum21_contig00009273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009273
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|2...    85   8e-15
ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vi...    82   7e-14
emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]    82   7e-14
ref|XP_002531928.1| leucine-rich repeat-containing protein, puta...    81   1e-13
ref|XP_002527699.1| ATP binding protein, putative [Ricinus commu...    80   1e-13

>ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|222834747|gb|EEE73210.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
 Frame = +3

Query: 3   LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKPLTE 182
           LS    V LPT+ DQLS LK L +  CK L +LPQLP ++EL+    C SL++       
Sbjct: 238 LSRNKFVSLPTSIDQLSGLKFLYMEDCKMLQSLPQLPPNLELLRVNGCTSLEKMQFSSNP 297

Query: 183 NNSTDLFFAFANCTKLHQLKTFNSLFTMLLP---QGHFDSCRNLSLFLPGSELPEFFKFQ 353
                L F F NC +L +   +N++F  LL    QG  +     S+F+PGSE+P +F  Q
Sbjct: 298 YKFNCLSFCFINCWRLSESDCWNNMFHTLLRKCFQGPPNLIEVFSVFIPGSEIPTWFSHQ 357

Query: 354 NKGDCLRFELPP 389
           ++G  +  + PP
Sbjct: 358 SEGSSVSVQTPP 369


>ref|XP_002273047.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1291

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 22/168 (13%)
 Frame = +3

Query: 3    LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKPLTE 182
            LS  + + +PT+  +L HL+RL +  CKNL +LP+LPSSI+ + A DC SL+ F+ P + 
Sbjct: 980  LSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETFSYPSSA 1039

Query: 183  ---NNSTDLFFAFANCTK-------------LHQLKTFNSLFTMLLPQGHFDSCR----N 302
                   D  F F+NC +             L +++   S+   + P  H  S R     
Sbjct: 1040 YPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEIRLVASIQKSMAPSEH--SARYGESR 1097

Query: 303  LSLFLPGSELPEFFKFQNKGDCLRFELPP--LPSILKGFSIASVFTPK 440
                +PGS +PE+F  Q++GD +  ELPP    +   G +  +VF PK
Sbjct: 1098 YDAVVPGSRIPEWFTHQSEGDSITVELPPGCYNTNSIGLAACAVFHPK 1145


>emb|CAN76615.1| hypothetical protein VITISV_040107 [Vitis vinifera]
          Length = 1414

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 22/168 (13%)
 Frame = +3

Query: 3    LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKPLTE 182
            LS  + + +PT+  +L HL+RL +  CKNL +LP+LPSSI+ + A DC SL+ F+ P + 
Sbjct: 953  LSRNNFITVPTSLSRLPHLRRLIVEHCKNLQSLPELPSSIKELLANDCTSLETFSYPSSA 1012

Query: 183  ---NNSTDLFFAFANCTK-------------LHQLKTFNSLFTMLLPQGHFDSCR----N 302
                   D  F F+NC +             L +++   S+   + P  H  S R     
Sbjct: 1013 YPLRKFGDFNFEFSNCFRLVGNEQSDTVEAILQEIRLVASIQKSMAPSEH--SARYGESR 1070

Query: 303  LSLFLPGSELPEFFKFQNKGDCLRFELPP--LPSILKGFSIASVFTPK 440
                +PGS +PE+F  Q++GD +  ELPP    +   G +  +VF PK
Sbjct: 1071 YDAVVPGSRIPEWFTHQSEGDSITVELPPGCYNTNSIGLAACAVFHPK 1118


>ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223528407|gb|EEF30442.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
 Frame = +3

Query: 3    LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKPLTE 182
            LSG + + LP +  +LS L+ L L  C+NL ++  +PSS++L+ A  C +L+   + L  
Sbjct: 630  LSGNNFISLPASVCRLSKLEHLYLDNCRNLQSMQAVPSSVKLLSAQACSALETLPETLDL 689

Query: 183  NNSTDLFFAFANCTKLHQLKTFNSLFTMLLP---QGHFDSCRNLSLFLPGSELPEFFKFQ 353
            +      F F NC KL + +  N++  M+L    QG  +      + +PGSE+P++   Q
Sbjct: 690  SGLQSPRFNFTNCFKLVENQGCNNIGFMMLRNYLQGLSNPKPGFDIIIPGSEIPDWLSHQ 749

Query: 354  NKGDC-LRFELPPL--PSILKGFSIASVFTPKTTSSYQAKEIGIRCHMR 491
            + GDC +  ELPP+   S   GF++ +V+      +    ++ + C ++
Sbjct: 750  SLGDCSISIELPPVWCDSKWMGFALCAVYVIYQEPALNFIDMDLTCFIK 798


>ref|XP_002527699.1| ATP binding protein, putative [Ricinus communis]
            gi|223532930|gb|EEF34698.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 908

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 54/146 (36%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
 Frame = +3

Query: 3    LSGTDLVILPTNCDQLSHLKRLGLVGCKNLLALPQLPSSIELVDAMDCISLQEFTKP--L 176
            L G +   +P +  QL HLK L +  C NL +LP+LPS IE V+A DC SL+  + P   
Sbjct: 642  LRGNNFSNIPGDIRQLFHLKLLDISSCSNLRSLPELPSHIEYVNAHDCTSLESVSIPSSF 701

Query: 177  TENNSTDLFFAFANCTKLHQLKTFNSLFTMLLPQGHFDSCRNLSLFLPGSELPEFFKFQN 356
            T +      F F NC KL+     NS F  L   G   S     +  PGS++PE    Q+
Sbjct: 702  TVSEWNRPMFLFTNCFKLNLSAFLNSQFIDLQESGLLPSA---GICFPGSKIPEQISHQS 758

Query: 357  KGDCLRFELPP--LPSILKGFSIASV 428
             G  L  +LP     S  +GF++A+V
Sbjct: 759  AGSLLTVQLPVHWSNSQFRGFALAAV 784


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