BLASTX nr result

ID: Bupleurum21_contig00009266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009266
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca...   319   7e-85
gb|ACZ64255.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   316   6e-84
gb|ACZ64257.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   316   7e-84
gb|ACZ64258.1| RPM1 interacting protein 4 transcript 2a [Lactuca...   315   1e-83
gb|ACZ64256.1| RPM1 interacting protein 4 transcript 2 [Lactuca ...   315   2e-83

>gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca tatarica]
          Length = 243

 Score =  319 bits (818), Expect = 7e-85
 Identities = 163/259 (62%), Positives = 189/259 (72%), Gaps = 3/259 (1%)
 Frame = -1

Query: 908 MSQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMVNPNDPQENSEMFPDSAQEPEPP 729
           M+QRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKM+NPNDPQEN EMF D  + P  P
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFAD--KTPPTP 58

Query: 728 SREKNAPEELEGRKAVKPATHER--RTSRDDVDPRQIHXXXXXXXXXXXRGSTGSAYQNR 555
            R +  PEE  GR+AV+P+  E   +   D+ D R                S GSAYQ R
Sbjct: 59  PRSRPQPEEPVGRRAVRPSREENEYQPPNDNADRRT---------------SGGSAYQ-R 102

Query: 554 GGHGSGSGRPARQSGGSEHSVDRSPLHPQYQAK-LAGRGSASPAWEGKHSYDSSHGTPGR 378
           GG G+ +GRP + S GSE+S DRSPLHP YQAK  AG+GS SPAWEGK+SYDSSHGTP R
Sbjct: 103 GGQGTAAGRPVKHSAGSENSFDRSPLHPHYQAKGAAGKGSGSPAWEGKNSYDSSHGTPSR 162

Query: 377 SRMKPASRGDESPDKGAAVPRFGEWDENDPASADNYTHIFNKVREERISGTPNNITSDPS 198
           SRMKP  RGDESPD+GAAVPRFGEWDEN+P+SADNYTHIFNKVREER++G+P    SD  
Sbjct: 163 SRMKPV-RGDESPDRGAAVPRFGEWDENNPSSADNYTHIFNKVREERVTGSPMTSGSDAR 221

Query: 197 YANRKKQNDQDKSKCSCFP 141
                 ++ +  +KCSCFP
Sbjct: 222 PNYNIPRDQKTNNKCSCFP 240


>gb|ACZ64255.1| RPM1 interacting protein 4 transcript 2 [Lactuca indica]
          Length = 243

 Score =  316 bits (810), Expect = 6e-84
 Identities = 161/259 (62%), Positives = 190/259 (73%), Gaps = 3/259 (1%)
 Frame = -1

Query: 908 MSQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMVNPNDPQENSEMFPDSAQEPEPP 729
           M+QRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKM+NPNDPQ+N EMF D  + P  P
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQQNPEMFAD--KTPPTP 58

Query: 728 SREKNAPEELEGRKAVKPATHER--RTSRDDVDPRQIHXXXXXXXXXXXRGSTGSAYQNR 555
            R +  PEE  GR+AV+P+  E   +   D+   R                S GSAYQ R
Sbjct: 59  PRSRPQPEEPVGRRAVRPSREENEYQPPNDNTGRRT---------------SGGSAYQ-R 102

Query: 554 GGHGSGSGRPARQSGGSEHSVDRSPLHPQYQAKL-AGRGSASPAWEGKHSYDSSHGTPGR 378
           GG G+ +GRP + S GSE+S DRSPLHP YQAK+ AG+GS SPAWEGK+SYDSSHGTP R
Sbjct: 103 GGQGTAAGRPVKHSAGSENSFDRSPLHPHYQAKVAAGKGSGSPAWEGKNSYDSSHGTPSR 162

Query: 377 SRMKPASRGDESPDKGAAVPRFGEWDENDPASADNYTHIFNKVREERISGTPNNITSDPS 198
           SRMKPA RGD+SPD+GAAVPRFGEWDEN+P+SADNYTHIFNKVREER++G+P    SD  
Sbjct: 163 SRMKPA-RGDDSPDRGAAVPRFGEWDENNPSSADNYTHIFNKVREERVTGSPMASGSDAR 221

Query: 197 YANRKKQNDQDKSKCSCFP 141
                 ++ +  +KCSCFP
Sbjct: 222 PNYNIPRDQKSNNKCSCFP 240


>gb|ACZ64257.1| RPM1 interacting protein 4 transcript 2 [Lactuca viminea]
          Length = 243

 Score =  316 bits (809), Expect = 7e-84
 Identities = 162/259 (62%), Positives = 190/259 (73%), Gaps = 3/259 (1%)
 Frame = -1

Query: 908 MSQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMVNPNDPQENSEMFPDSAQEPEPP 729
           M+QRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKM+NPNDPQEN EMF D  + P   
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFAD--KTPPTA 58

Query: 728 SREKNAPEELEGRKAVKPATHER--RTSRDDVDPRQIHXXXXXXXXXXXRGSTGSAYQNR 555
            R +  PEE  GR+AV+P+  E   +   D+V  R                S GSAYQ R
Sbjct: 59  HRSRPQPEEPVGRRAVRPSREENEYQPPNDNVVRRT---------------SGGSAYQ-R 102

Query: 554 GGHGSGSGRPARQSGGSEHSVDRSPLHPQYQAKL-AGRGSASPAWEGKHSYDSSHGTPGR 378
           GG G+ +GRP + S GSE+S DRSPLHP YQAK+ AG+GS SPAWEGK+SYDSSHGTP R
Sbjct: 103 GGQGTAAGRPVKHSAGSENSFDRSPLHPHYQAKVAAGKGSGSPAWEGKNSYDSSHGTPSR 162

Query: 377 SRMKPASRGDESPDKGAAVPRFGEWDENDPASADNYTHIFNKVREERISGTPNNITSDPS 198
           SRMKPA RGD+SPD+GAAVPRFGEWDEN+P+SADNYTHIFNKVREER++G+P    SD  
Sbjct: 163 SRMKPA-RGDDSPDRGAAVPRFGEWDENNPSSADNYTHIFNKVREERVTGSPMTSGSDAR 221

Query: 197 YANRKKQNDQDKSKCSCFP 141
                 ++ +  +KCSCFP
Sbjct: 222 PNYNIPRDQKSNNKCSCFP 240


>gb|ACZ64258.1| RPM1 interacting protein 4 transcript 2a [Lactuca tatarica]
          Length = 243

 Score =  315 bits (807), Expect = 1e-83
 Identities = 161/259 (62%), Positives = 189/259 (72%), Gaps = 3/259 (1%)
 Frame = -1

Query: 908 MSQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMVNPNDPQENSEMFPDSAQEPEPP 729
           M+QRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKM+NPNDPQEN EMF D  + P  P
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFAD--KTPPTP 58

Query: 728 SREKNAPEELEGRKAVKPATHER--RTSRDDVDPRQIHXXXXXXXXXXXRGSTGSAYQNR 555
            R +  PEE  GR+AV+P+  E   +   D+   R                S GSAYQ R
Sbjct: 59  PRSRPQPEEPVGRRAVRPSREENEYQPPNDNAGRR---------------ASGGSAYQ-R 102

Query: 554 GGHGSGSGRPARQSGGSEHSVDRSPLHPQYQAKL-AGRGSASPAWEGKHSYDSSHGTPGR 378
           GG G+ +GRP + S GSE+S DRSPLHP YQAK+ AG+GS SPAWEGK+SYDSS GTP R
Sbjct: 103 GGQGTAAGRPVKHSAGSENSFDRSPLHPHYQAKVAAGKGSGSPAWEGKNSYDSSQGTPSR 162

Query: 377 SRMKPASRGDESPDKGAAVPRFGEWDENDPASADNYTHIFNKVREERISGTPNNITSDPS 198
           SRMKPA RGD+SPD+GAAVPRFGEWDEN+P+SADNYTHIFNKVREER++G+P    SD  
Sbjct: 163 SRMKPA-RGDDSPDRGAAVPRFGEWDENNPSSADNYTHIFNKVREERVTGSPMTSGSDAR 221

Query: 197 YANRKKQNDQDKSKCSCFP 141
                 ++ +  +KCSCFP
Sbjct: 222 PNYNIPRDQKTNNKCSCFP 240


>gb|ACZ64256.1| RPM1 interacting protein 4 transcript 2 [Lactuca perennis]
          Length = 243

 Score =  315 bits (806), Expect = 2e-83
 Identities = 161/259 (62%), Positives = 188/259 (72%), Gaps = 3/259 (1%)
 Frame = -1

Query: 908 MSQRPVVPKFGNWESEDNVPYTVYFEKARKGKTGGKMVNPNDPQENSEMFPDSAQEPEPP 729
           M+QRP VPKFGNWESEDNVPYTVYF+KARKGKTGGKM+NPNDPQEN EMF D  + P  P
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFAD--KTPPTP 58

Query: 728 SREKNAPEELEGRKAVKPATHER--RTSRDDVDPRQIHXXXXXXXXXXXRGSTGSAYQNR 555
            R +  PEE  GR+AV+P+  E   +   D+   R                S GSAYQ R
Sbjct: 59  PRSRPQPEEPVGRRAVRPSREENEYQPPNDNAGRRT---------------SGGSAYQ-R 102

Query: 554 GGHGSGSGRPARQSGGSEHSVDRSPLHPQYQAK-LAGRGSASPAWEGKHSYDSSHGTPGR 378
           GG G+ +GRP + S GSE+S DRSPLHP YQAK  AG+GS SP WEGK+SYDSSHGTP R
Sbjct: 103 GGQGTAAGRPVKNSAGSENSFDRSPLHPHYQAKAAAGKGSGSPXWEGKNSYDSSHGTPSR 162

Query: 377 SRMKPASRGDESPDKGAAVPRFGEWDENDPASADNYTHIFNKVREERISGTPNNITSDPS 198
           SRMKPA RGD+SPD+GAAVPRFGEWDEN+P+SADNYTHIFNKVREER++G+P    SD  
Sbjct: 163 SRMKPA-RGDDSPDRGAAVPRFGEWDENNPSSADNYTHIFNKVREERVTGSPMASGSDAR 221

Query: 197 YANRKKQNDQDKSKCSCFP 141
                 ++ +  +KCSCFP
Sbjct: 222 PNYNIPRDQKSNNKCSCFP 240


Top