BLASTX nr result

ID: Bupleurum21_contig00009265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009265
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632199.1| PREDICTED: inner membrane protein PPF-1, chl...    98   8e-19
ref|XP_002284077.1| PREDICTED: inner membrane protein PPF-1, chl...    98   8e-19
ref|XP_003539682.1| PREDICTED: inner membrane protein PPF-1, chl...    96   3e-18
ref|XP_004150182.1| PREDICTED: inner membrane protein PPF-1, chl...    95   5e-18
ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast pr...    95   7e-18

>ref|XP_003632199.1| PREDICTED: inner membrane protein PPF-1, chloroplastic isoform 2
           [Vitis vinifera]
          Length = 425

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 55/95 (57%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
 Frame = +2

Query: 2   STRVNFSLNQLPPIHS-----VDFSAIVSRTESLLYTLXXXXXXXXXXXXXXXXXXXXX- 163
           STRV FSL+ LPPIHS     +DF+ IVSR ESLLYTL                      
Sbjct: 36  STRVKFSLHDLPPIHSLDSSSIDFAGIVSRAESLLYTLADAAVSADPAAAGPASGTADAA 95

Query: 164 -QKSGGWFGFISEAMEFVLKVLKDGLTAVHVPYSY 265
            QK+GGWFGFISE ME VLKVL+DGLTAVHVPY+Y
Sbjct: 96  VQKNGGWFGFISEGMEVVLKVLEDGLTAVHVPYAY 130


>ref|XP_002284077.1| PREDICTED: inner membrane protein PPF-1, chloroplastic isoform 1
           [Vitis vinifera]
          Length = 455

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 55/95 (57%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
 Frame = +2

Query: 2   STRVNFSLNQLPPIHS-----VDFSAIVSRTESLLYTLXXXXXXXXXXXXXXXXXXXXX- 163
           STRV FSL+ LPPIHS     +DF+ IVSR ESLLYTL                      
Sbjct: 36  STRVKFSLHDLPPIHSLDSSSIDFAGIVSRAESLLYTLADAAVSADPAAAGPASGTADAA 95

Query: 164 -QKSGGWFGFISEAMEFVLKVLKDGLTAVHVPYSY 265
            QK+GGWFGFISE ME VLKVL+DGLTAVHVPY+Y
Sbjct: 96  VQKNGGWFGFISEGMEVVLKVLEDGLTAVHVPYAY 130


>ref|XP_003539682.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
           [Glycine max]
          Length = 450

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 52/95 (54%), Positives = 63/95 (66%), Gaps = 7/95 (7%)
 Frame = +2

Query: 2   STRVNFSLNQLPPI----HSVDFSAIVSRTESLLYTLXXXXXXXXXXXXXXXXXXXXX-- 163
           +T+V+ SL+++PPI    HS+DF+ IV+R E LLYTL                       
Sbjct: 32  TTKVHVSLHEIPPIQSLSHSIDFAGIVTRAEGLLYTLADAAVAADPAVAADTAASTTDAA 91

Query: 164 -QKSGGWFGFISEAMEFVLKVLKDGLTAVHVPYSY 265
            QKSGGWFGFISEAMEFVLKVLKDGL+AVHVPY+Y
Sbjct: 92  VQKSGGWFGFISEAMEFVLKVLKDGLSAVHVPYAY 126


>ref|XP_004150182.1| PREDICTED: inner membrane protein PPF-1, chloroplastic-like
           [Cucumis sativus] gi|449524424|ref|XP_004169223.1|
           PREDICTED: inner membrane protein PPF-1,
           chloroplastic-like [Cucumis sativus]
          Length = 453

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 53/95 (55%), Positives = 60/95 (63%), Gaps = 7/95 (7%)
 Frame = +2

Query: 2   STRVNFSLNQLPPIH----SVDFSAIVSRTESLLYTLXXXXXXXXXXXXXXXXXXXXX-- 163
           +TRVNFS +QLPP+H    S+DF AIVSRTE LLYTL                       
Sbjct: 35  TTRVNFSFHQLPPVHTFHSSLDFQAIVSRTEGLLYTLADAAVAVDSTLSAAATSTSPDTA 94

Query: 164 -QKSGGWFGFISEAMEFVLKVLKDGLTAVHVPYSY 265
            QK+GGWFGFIS+AME VLKVLK  L AVH+PYSY
Sbjct: 95  VQKNGGWFGFISDAMEVVLKVLKGSLEAVHIPYSY 129


>ref|XP_002531362.1| Inner membrane protein PPF-1, chloroplast precursor, putative
           [Ricinus communis] gi|223529022|gb|EEF31010.1| Inner
           membrane protein PPF-1, chloroplast precursor, putative
           [Ricinus communis]
          Length = 449

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/91 (57%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   STRVNFSLNQLPPI---HSVDFSAIVSRTESLLYTLXXXXXXXXXXXXXXXXXXXXXQKS 172
           +T+V FSL+++PPI    SVDF++IVSR ESLLYTL                     QK+
Sbjct: 38  TTKVKFSLHEIPPITHLDSVDFNSIVSRAESLLYTLADAAVAVDSSAATDTAV----QKN 93

Query: 173 GGWFGFISEAMEFVLKVLKDGLTAVHVPYSY 265
            GWFGFISE MEFVLKVLKDGL++VHVPYSY
Sbjct: 94  NGWFGFISEGMEFVLKVLKDGLSSVHVPYSY 124


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