BLASTX nr result

ID: Bupleurum21_contig00009245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009245
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Rici...    61   8e-08
gb|ADK55590.1| plastid NEP interaction protein [Nicotiana bentha...    57   2e-06
ref|XP_004146160.1| PREDICTED: NEP1-interacting protein 1-like [...    55   5e-06
ref|XP_003517156.1| PREDICTED: LOW QUALITY PROTEIN: NEP1-interac...    55   5e-06
ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
           gi|223529804|gb|EEF31739.1| RING-H2 finger protein
           ATL4M, putative [Ricinus communis]
          Length = 235

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +1

Query: 82  AKMGAVETSFEDVQNIFDTGGAMGLAGDSVEKILKMAYQRNQLV 213
           ++MGAVETSFE+VQNIFDTGGA GL GD+VEKI K+    N  +
Sbjct: 138 SQMGAVETSFEEVQNIFDTGGAKGLTGDTVEKIPKIKITSNNTI 181


>gb|ADK55590.1| plastid NEP interaction protein [Nicotiana benthamiana]
          Length = 241

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +1

Query: 82  AKMGAVETSFEDVQNIFDTGGAMGLAGDSVEKILKMAYQR-NQLVGIDYRFYSNLCV 249
           ++MGAVET++E++ NIFDTGGA GL GDSVEKI K+     N + G   R   ++C+
Sbjct: 144 SQMGAVETAYEEIPNIFDTGGAKGLPGDSVEKIPKIIIANDNDMDGSGERVSCSVCL 200


>ref|XP_004146160.1| PREDICTED: NEP1-interacting protein 1-like [Cucumis sativus]
           gi|449533956|ref|XP_004173936.1| PREDICTED:
           NEP1-interacting protein 1-like [Cucumis sativus]
          Length = 235

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/44 (59%), Positives = 32/44 (72%)
 Frame = +1

Query: 82  AKMGAVETSFEDVQNIFDTGGAMGLAGDSVEKILKMAYQRNQLV 213
           ++MGA ETSF+D+ NIFDT  A GL GDSVEKI K+   +N  V
Sbjct: 138 SQMGATETSFDDIPNIFDTSSAKGLPGDSVEKIPKIVVSKNNSV 181


>ref|XP_003517156.1| PREDICTED: LOW QUALITY PROTEIN: NEP1-interacting protein 1-like
           [Glycine max]
          Length = 256

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = +1

Query: 82  AKMGAVETSFEDVQNIFDTGGAMGLAGDSVEKILKM 189
           ++MGAVETSF++VQNIFDTGG+ GL+GD V+KI K+
Sbjct: 135 SQMGAVETSFDEVQNIFDTGGSKGLSGDLVDKIPKI 170


>ref|XP_002327636.1| predicted protein [Populus trichocarpa] gi|222836721|gb|EEE75114.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = +1

Query: 82  AKMGAVETSFEDVQNIFDTGGAMGLAGDSVEKILKMAYQRNQLV 213
           ++MGAVET+FE++ NIFDTGG+ GL GDS+EKI K+    N  V
Sbjct: 127 SQMGAVETNFEEIPNIFDTGGSKGLPGDSLEKIPKIRITSNNNV 170


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