BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009226
         (1686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...   583   e-164
ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   578   e-162
ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...   577   e-162
ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|NP_564488.1| sequence-specific DNA binding transcription fac...   540   e-151

>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  583 bits (1503), Expect = e-164
 Identities = 284/358 (79%), Positives = 327/358 (91%), Gaps = 1/358 (0%)
 Frame = -2

Query: 1466 MSKTIVQPVGQKRLTNVAVVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 1287
            MS  ++QPVGQKRLTNVAVVRLKKHG+RFEIACYKNKVLSWRSGVEKDLDEVLQS  VYS
Sbjct: 1    MSVKLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 1286 NVSKGVLAKSKDLKAAFGMDDQEKICLEILEKGELQVAGKERESQLSNQFRDIATIVMQK 1107
            NVSKGVLAK+ DL  AFG DD  KICLEILEKGELQVAGKER+SQLS+QFRDIATIVMQK
Sbjct: 61   NVSKGVLAKNSDLVKAFGHDDHTKICLEILEKGELQVAGKERDSQLSSQFRDIATIVMQK 120

Query: 1106 TINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRLRLTV 927
            TINPET RPYTISM+ERLMHEIHFAVDPH+SSKKQAL+VIRELQKHFPIKRSPMRLRL V
Sbjct: 121  TINPETQRPYTISMVERLMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRSPMRLRLAV 180

Query: 926  PGQTYSSVFEKLNEWNSTIISKEESGNQPSVICEMDPGFFRDCDAMVRNLQGRLEILAVS 747
             GQ + ++ EKLN W++ ++SK+ESG+  SVICEMDPGFFRDCDA+VRNLQGR+EILAVS
Sbjct: 181  IGQKFPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGFFRDCDALVRNLQGRMEILAVS 240

Query: 746  VHAEGDTSVDNYDDHEELPSELPRDSTPSDVQLSEKLQKQSIS-EKKADVVGDVKQNKCS 570
            VH EGDT VD++DD+E++P  LP++S  S+VQLSEK+QKQ+IS EKKAD +   KQNKCS
Sbjct: 241  VHFEGDTHVDDFDDYEDVPPALPKESADSEVQLSEKIQKQTISEEKKADTL--AKQNKCS 298

Query: 569  TCNAYVGDSKQYREHFKSEWHKHNLKRKTKQLPPLSAEECMADMDISDAKSDLKDYSF 396
            TCNA+VGD+KQ+R+HFKS+WHKHNLKRKTKQLPPL+AEEC+ADMD++D+K+DLK+YSF
Sbjct: 299  TCNAFVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTAEECLADMDLNDSKADLKEYSF 356


>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
            gi|302142747|emb|CBI19950.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  578 bits (1489), Expect = e-162
 Identities = 284/358 (79%), Positives = 323/358 (90%), Gaps = 1/358 (0%)
 Frame = -2

Query: 1466 MSKTIVQPVGQKRLTNVAVVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 1287
            MS+ + QP+GQKRLTNVAVVRLKK GIRFEIACYKNKVLSWRSGVEKDLDEVLQS IVYS
Sbjct: 1    MSRVVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVYS 60

Query: 1286 NVSKGVLAKSKDLKAAFGMD-DQEKICLEILEKGELQVAGKERESQLSNQFRDIATIVMQ 1110
            NVSKGVLAKSKDL+AAFG + DQ +I LEIL+KGELQVAGKERESQLS+QFRDIATIVMQ
Sbjct: 61   NVSKGVLAKSKDLEAAFGKERDQTEILLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 120

Query: 1109 KTINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRLRLT 930
            KTINPET RPYT SMIERLMHEIHF+VDP++SSKKQALEVIRELQKHFPIKR PMRLRLT
Sbjct: 121  KTINPETQRPYTSSMIERLMHEIHFSVDPNSSSKKQALEVIRELQKHFPIKRCPMRLRLT 180

Query: 929  VPGQTYSSVFEKLNEWNSTIISKEESGNQPSVICEMDPGFFRDCDAMVRNLQGRLEILAV 750
            VP Q +SS+ EKLN WN++I+SK+ESG Q S+ICEM+PG FRDCDA+VRNLQGRLEILAV
Sbjct: 181  VPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEPGIFRDCDALVRNLQGRLEILAV 240

Query: 749  SVHAEGDTSVDNYDDHEELPSELPRDSTPSDVQLSEKLQKQSISEKKADVVGDVKQNKCS 570
            S+H EGDT VD+YDDHE +PS LP++S    +QLSEK+Q+Q+IS   +   G+VKQNKCS
Sbjct: 241  SLHMEGDTHVDDYDDHEHVPSRLPKESADPVLQLSEKVQRQTISVGSSSTEGEVKQNKCS 300

Query: 569  TCNAYVGDSKQYREHFKSEWHKHNLKRKTKQLPPLSAEECMADMDISDAKSDLKDYSF 396
            TC+A+VGDSKQYREHFKSEWHKHNL RKT+QLPPLSAEEC+ DM+++D K+DLKDYSF
Sbjct: 301  TCDAFVGDSKQYREHFKSEWHKHNLGRKTRQLPPLSAEECLTDMEMNDLKADLKDYSF 358


>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
            communis] gi|223540466|gb|EEF42033.1|
            Shwachman-Bodian-Diamond syndrome protein, putative
            [Ricinus communis]
          Length = 356

 Score =  577 bits (1486), Expect = e-162
 Identities = 277/357 (77%), Positives = 326/357 (91%)
 Frame = -2

Query: 1466 MSKTIVQPVGQKRLTNVAVVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 1287
            MSK+++QP+GQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQS  VYS
Sbjct: 1    MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 1286 NVSKGVLAKSKDLKAAFGMDDQEKICLEILEKGELQVAGKERESQLSNQFRDIATIVMQK 1107
            NVSKGVLAKSKDL+ AFG DDQ KICLEILEKGELQVAGKERESQL++QFRDIAT+VMQK
Sbjct: 61   NVSKGVLAKSKDLEKAFGTDDQTKICLEILEKGELQVAGKERESQLTSQFRDIATMVMQK 120

Query: 1106 TINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRLRLTV 927
            T+NPET RPYTISMIERLMHEIHFAVDPH+SSKKQALEVIRELQKHFPIKRSPMRLRL +
Sbjct: 121  TVNPETQRPYTISMIERLMHEIHFAVDPHSSSKKQALEVIRELQKHFPIKRSPMRLRLAI 180

Query: 926  PGQTYSSVFEKLNEWNSTIISKEESGNQPSVICEMDPGFFRDCDAMVRNLQGRLEILAVS 747
                 SS+ EKLN WN+T++SK+ESG+Q SVICE+DPG FR+CD +VRNLQGRLEILA+S
Sbjct: 181  SEPNISSLLEKLNTWNATVVSKDESGSQLSVICELDPGLFRECDVLVRNLQGRLEILAMS 240

Query: 746  VHAEGDTSVDNYDDHEELPSELPRDSTPSDVQLSEKLQKQSISEKKADVVGDVKQNKCST 567
            VH EGD  VD+YDD+E++P+ +P++ST S VQLSEK+QKQ+IS +K +  G+VKQ+KC+T
Sbjct: 241  VHFEGDAHVDDYDDYEDVPASIPKESTDSVVQLSEKIQKQTISAEKKN-EGEVKQHKCNT 299

Query: 566  CNAYVGDSKQYREHFKSEWHKHNLKRKTKQLPPLSAEECMADMDISDAKSDLKDYSF 396
            CNA+VGD+K+YR+HFKSEWHKHNL+RKT+ L PL+AEEC+AD+++ D+K+DLKDYSF
Sbjct: 300  CNAFVGDAKEYRDHFKSEWHKHNLRRKTRHLLPLTAEECLADVELDDSKADLKDYSF 356


>ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|222856124|gb|EEE93671.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  566 bits (1458), Expect = e-159
 Identities = 279/359 (77%), Positives = 321/359 (89%), Gaps = 2/359 (0%)
 Frame = -2

Query: 1466 MSKTIVQPVGQKRLTNVAVVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQ-IVY 1290
            MS  + QPVGQKRLTNVAVVRLKKHG+RFEIACYKNKVLSWRSGVEKDLDEVLQS   VY
Sbjct: 1    MSVKLQQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHHTVY 60

Query: 1289 SNVSKGVLAKSKDLKAAFGMDDQEKICLEILEKGELQVAGKERESQLSNQFRDIATIVMQ 1110
            SNVSKG+LAKS DL  AFG DDQ +ICLEIL+KGELQVAGKERESQLS+QFRDIATIVMQ
Sbjct: 61   SNVSKGILAKSLDLNKAFGHDDQTRICLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 120

Query: 1109 KTINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRLRLT 930
            KTINPET RPYTISMIERLMHE HFAV+PHNSSKKQAL+VIRELQKHFPIKRSPMRL LT
Sbjct: 121  KTINPETQRPYTISMIERLMHETHFAVEPHNSSKKQALDVIRELQKHFPIKRSPMRLGLT 180

Query: 929  VPGQTYSSVFEKLNEWNSTIISKEESGNQPSVICEMDPGFFRDCDAMVRNLQGRLEILAV 750
            V GQ +S++ EKL  W++ ++SK+ESG++ S+ICEMDPGFFRDCD +VRNLQGRLEILAV
Sbjct: 181  VSGQNFSTLLEKLGAWDANVVSKDESGSRQSIICEMDPGFFRDCDTLVRNLQGRLEILAV 240

Query: 749  SVHAEGDTSVDNYDDHEELPSELPRDSTPSDVQLSEKLQKQSIS-EKKADVVGDVKQNKC 573
            SVH E DT VD+YDD+E++PS LP+ ST S VQLSEK+QKQ++S EKKA    +VKQNKC
Sbjct: 241  SVHFEEDTHVDDYDDYEDVPSALPKGSTDSAVQLSEKIQKQTLSDEKKAG--AEVKQNKC 298

Query: 572  STCNAYVGDSKQYREHFKSEWHKHNLKRKTKQLPPLSAEECMADMDISDAKSDLKDYSF 396
            STCN  VGD+KQ+R+HFKS+WHKHNLKRKTKQLPPL++EEC+ DMD++D+ +D+K+YSF
Sbjct: 299  STCNVSVGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTSEECLGDMDMNDSNTDIKEYSF 357


>ref|NP_564488.1| sequence-specific DNA binding transcription factor [Arabidopsis
            thaliana] gi|7523664|gb|AAF63104.1|AC006423_5 Unknown
            protein [Arabidopsis thaliana] gi|15450898|gb|AAK96720.1|
            Unknown protein [Arabidopsis thaliana]
            gi|30725592|gb|AAP37818.1| At1g43860 [Arabidopsis
            thaliana] gi|332193881|gb|AEE32002.1| sequence-specific
            DNA binding transcription factor [Arabidopsis thaliana]
          Length = 370

 Score =  540 bits (1390), Expect = e-151
 Identities = 267/370 (72%), Positives = 316/370 (85%), Gaps = 13/370 (3%)
 Frame = -2

Query: 1466 MSKTIVQPVGQKRLTNVAVVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 1287
            MSKT+VQPVGQKRLTNVAVVRLKK G RFEIACYKNKVLSWRSGVEKD+DEVLQS  VYS
Sbjct: 1    MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 1286 NVSKGVLAKSKDLKAAFGMDDQEKICLEILEKGELQVAGKERESQLSNQFRDIATIVMQK 1107
            NVSKGVLAKSKDL  +FG DD  KIC++ILEKGELQVAGKERESQ S+QFRDIATIVMQK
Sbjct: 61   NVSKGVLAKSKDLMKSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 1106 TINPETHRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIRELQKHFPIKRSPMRLRLTV 927
            TINPET RPYTISM+ERLMHEIHFAVDPH++SKKQAL+VIRELQKHFPIKRSPMRLRLTV
Sbjct: 121  TINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 180

Query: 926  PGQTYSSVFEKLNEWNSTIISKEESGNQPSVICEMDPGFFRDCDAMVRNLQGRLEILAVS 747
            P Q + S+ EKL EW+ +++SK+ESG Q S +CEM+PG FR+CD+ VR++QGRLEILAVS
Sbjct: 181  PVQNFPSLLEKLKEWDGSVVSKDESGTQMSTVCEMEPGLFRECDSHVRSIQGRLEILAVS 240

Query: 746  VHAEGDTSVDNYDDHEE---------LPSEL-PRDSTPSDVQLSEKLQKQSISEK---KA 606
            VHAEGDTS+D+YD+H++         LP+E   +D T   V+LS+KLQKQ IS     K 
Sbjct: 241  VHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNIKQ 300

Query: 605  DVVGDVKQNKCSTCNAYVGDSKQYREHFKSEWHKHNLKRKTKQLPPLSAEECMADMDISD 426
            +   + K  KCSTCN +VG++KQYREH KS+WHKHNLKRKT++LPP+SA+ECM+++D+ D
Sbjct: 301  EGGEEKKGTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPISADECMSEIDMDD 360

Query: 425  AKSDLKDYSF 396
            +++DLKDYSF
Sbjct: 361  SRADLKDYSF 370