BLASTX nr result

ID: Bupleurum21_contig00009212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009212
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD15107.1| hypothetical protein [Nicotiana tabacum]              218   2e-54
gb|ABJ99598.1| NBS-LRR type resistance protein [Beta vulgaris]        201   4e-49
ref|NP_001234202.1| NRC1 [Solanum lycopersicum] gi|83630761|gb|A...   194   3e-47
gb|ABJ99601.1| NBS-LRR type resistance protein [Beta vulgaris]        162   1e-37
gb|AET22504.1| hypothetical protein [Solanum lycopersicum] gi|35...   138   3e-30

>dbj|BAD15107.1| hypothetical protein [Nicotiana tabacum]
          Length = 364

 Score =  218 bits (555), Expect = 2e-54
 Identities = 126/285 (44%), Positives = 174/285 (61%), Gaps = 6/285 (2%)
 Frame = +1

Query: 4   CLREG-KEEKFLKVI----EHNFQDASGIPTYYRRLCIHSHVLNYVRSKPSNLRVRSFLC 168
           C +E  KEE   + I    E  F     + TY RRLCIHS VL ++ +KPS   VRSFL 
Sbjct: 24  CRQEAMKEENLFQEIKLGAEQYFPGKRELATY-RRLCIHSSVLEFISTKPSGEHVRSFLS 82

Query: 169 LATEECELPREHTSFIHEAFKLVRVLDVRSICLYRFPNDIVQLVHLRYVAIFGN-FKVLP 345
            + ++ E+P      I + F L+RV DV SI   RF  +  +L HLRY+A   +  K++P
Sbjct: 83  FSLKKIEMPSVDIPTIPKGFPLLRVFDVESINFSRFSKEFFRLYHLRYIAFSSDTIKIIP 142

Query: 346 QSICKLRNLQTLLVETTEREMDIQVDIWKMLHFRHLHTSGSSRLHGPPPNTRKHNEDPFV 525
           + I +L N+QTL++ T +R +DIQ +IW M   RHLHT+ S++L  P P T + ++ P V
Sbjct: 143 KHIGELWNIQTLIINTQQRSLDIQANIWNMARLRHLHTNSSAKL--PLPVTPRSSKVPLV 200

Query: 526 RRSMQTISTISPDSCTENILARTPNLKKLGIRGKLITLTERKGESSMFDNIARLGNLETL 705
            +S+QT+STI+P+SCTE + ARTPNLKKLGIRGK+  L E     S+  N+ +L  LE L
Sbjct: 201 NQSLQTLSTIAPESCTEEVFARTPNLKKLGIRGKIAVLLE--PNKSLLKNVKKLEYLENL 258

Query: 706 KLLNDTFPLSSSEAKLHRLPQWYKFPPNLKSITFSETLLDWRHMS 840
           KL+ND    SS   K  RLP  Y FP  L+ ++  +T L+W  MS
Sbjct: 259 KLIND----SSQTGKGLRLPPSYIFPTKLRKLSLVDTWLEWNDMS 299


>gb|ABJ99598.1| NBS-LRR type resistance protein [Beta vulgaris]
          Length = 895

 Score =  201 bits (510), Expect = 4e-49
 Identities = 115/287 (40%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
 Frame = +1

Query: 1    LCLREGKEEKFLKVIEHN-----FQDASGIPTYYRRLCIHSHVLNYVRSKPSNLRVRSFL 165
            LC +E +EE    VI+       F+  +G  +  RRL IHS++L+ V+S  +  R RSF+
Sbjct: 487  LCKQEAEEENLFNVIKDPEDLVAFKSTAGAISMCRRLGIHSYILDCVQSNLTAARTRSFV 546

Query: 166  CLATEECELPREHTSFIHEAFKLVRVLDVRSICLYRFPNDIVQLVHLRYVAIFGNFKVLP 345
             +A EE  LP EH SFI  AF+L+R+LDV SI   RFP ++++LV LRY+++   F VLP
Sbjct: 547  SMAVEEVRLPLEHISFIPRAFQLLRILDVTSIIFERFPKELLRLVQLRYISMAITFTVLP 606

Query: 346  QSICKLRNLQTLLVET-TEREMDIQVDIWKMLHFRHLHTSGSSR-LHGPPPNTRKHNEDP 519
              + KL N+Q L+++  +   +DI+ DIWKM   RHLHT+ S+  +  P   T+K N   
Sbjct: 607  PDMSKLWNMQILMIKAISGNSLDIRADIWKMFQLRHLHTNVSANFVMRPSSKTKKQNHQG 666

Query: 520  FVRRSMQTISTISPDSCTENILARTPNLKKLGIRGKL--ITLTERKGESSMFDNIARLGN 693
                 ++T+++IS DSCT  +LAR P + KLG   KL  + +  + G  S F+ +A +  
Sbjct: 667  --PSHIKTLTSISADSCTSKLLARIPTVTKLGHSRKLEELIMPPQGGGVSTFEALANMKY 724

Query: 694  LETLKLLNDTFPLSSSEAKLHRLPQWYKFPPNLKSITFSETLLDWRH 834
            LETLK   D    S++ +K+   P   KFPPNL+++T ++T+L W H
Sbjct: 725  LETLKFYGDV--SSNARSKISHFPGHNKFPPNLRNLTITDTMLSWEH 769



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 27/54 (50%), Positives = 41/54 (75%)
 Frame = +2

Query: 986  QHWEPLDGGFRFLKVLQLDRTDLVQWDASAHHFPRLERVVLKHCERLEAIPSGL 1147
            ++W+P D GFR L+V  L RT+L +W+AS +HFP L++++LK C+RLE + S L
Sbjct: 792  EYWKPKDDGFRTLEVFYLGRTNLQKWEASNYHFPSLKKLILKFCDRLEGLSSSL 845


>ref|NP_001234202.1| NRC1 [Solanum lycopersicum] gi|83630761|gb|ABC26878.1| NRC1 [Solanum
            lycopersicum]
          Length = 888

 Score =  194 bits (494), Expect = 3e-47
 Identities = 111/253 (43%), Positives = 158/253 (62%), Gaps = 1/253 (0%)
 Frame = +1

Query: 85   YRRLCIHSHVLNYVRSKPSNLRVRSFLCLATEECELPREHTSFIHEAFKLVRVLDVRSIC 264
            +RRLCIHS V+ ++  KPS   VRSFLC + E+ + P   ++ I +AF L+RV D  SI 
Sbjct: 515  HRRLCIHSSVVEFISKKPSGEHVRSFLCFSPEKIDTPPTVSANISKAFPLLRVFDTESIK 574

Query: 265  LYRFPNDIVQLVHLRYVAI-FGNFKVLPQSICKLRNLQTLLVETTEREMDIQVDIWKMLH 441
            + RF  +  QL HLRY+A  F + KV+P+ + +L N+QTL+V T +  +DIQ DI  M  
Sbjct: 575  INRFCKEFFQLYHLRYIAFSFDSIKVIPKHVGELWNVQTLIVNTQQINLDIQADILNMPR 634

Query: 442  FRHLHTSGSSRLHGPPPNTRKHNEDPFVRRSMQTISTISPDSCTENILARTPNLKKLGIR 621
             RHL T+ S++L  P     K ++   V +S+QT+STI+P+SCTE +L+R PNLKKLGIR
Sbjct: 635  LRHLLTNTSAKL--PALANPKTSKTTLVNQSLQTLSTIAPESCTEYVLSRAPNLKKLGIR 692

Query: 622  GKLITLTERKGESSMFDNIARLGNLETLKLLNDTFPLSSSEAKLHRLPQWYKFPPNLKSI 801
            GK+  L E   +S + +N+ RL  LE LKL+N    +   +    RLP    FP  L+ +
Sbjct: 693  GKIAKLME-PSQSVLLNNVKRLQFLENLKLIN----VGQIDQTQLRLPPASIFPTKLRKL 747

Query: 802  TFSETLLDWRHMS 840
            T  +T L+W  MS
Sbjct: 748  TLLDTWLEWDDMS 760



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +2

Query: 986  QHWEPLDGGFRFLKVLQLDRTDLVQWDASAHHFPRLERVVLKHCERLEAIPSGL 1147
            ++WE  DGGF FL+VL ++R +LV W+AS  HFPRL+ + +  C++LE IP GL
Sbjct: 781  ENWELNDGGFPFLQVLCIERANLVSWNASGDHFPRLKHLHIS-CDKLEKIPIGL 833


>gb|ABJ99601.1| NBS-LRR type resistance protein [Beta vulgaris]
          Length = 899

 Score =  162 bits (411), Expect = 1e-37
 Identities = 106/288 (36%), Positives = 160/288 (55%), Gaps = 10/288 (3%)
 Frame = +1

Query: 1    LCLREGKEEKFLKVIEHN-----FQDASGIPTYYRRLCIHSHVLNYVRSKPSNLRVRSFL 165
            LC +E +EE    VI+       F+  +G  +  RRL IHS++L+ V+S  +  R RSF+
Sbjct: 492  LCKQEAEEENLFNVIKDPEDLVAFKSTAGAISMCRRLGIHSYILDCVQSNLTAARTRSFV 551

Query: 166  CLATEECELPREHTSFIHEAFKLVRVLDVRSICLYRFPNDIVQLVHLRYVAIFGNFKVLP 345
             +A EE  LP EH SFI  AF+L+R+LDV SI   RFP +++ LV LRY+A+   F VLP
Sbjct: 552  SMAVEEVRLPLEHISFIPRAFQLLRILDVTSIIFERFPKELLGLVQLRYIAMAITFTVLP 611

Query: 346  QSICKLRNLQTLLVET-TEREMDIQVDIWKMLHFR-HLHTSGSSRLHGPPPNTR-KHNED 516
              + KL N+Q L+++  +E  + ++    K  +    +     + L  P P  R K  + 
Sbjct: 612  PDMSKLWNMQILMIKVISEIRLILEQTYGKCFNLGICIQMCRLTLLCVPAPKQRNKIIKV 671

Query: 517  PFVRRSMQTISTISPDSCTENILARTPNLKKLGIRGKL--ITLTERKGESSMFDNIARLG 690
            P + + +     I    CT   LAR P + KLGIRGKL  + +  + G  S F+ +A + 
Sbjct: 672  PPISKHLLQYQLI----CTSKFLARIPTVTKLGIRGKLEELIMPPQGGGVSTFEALANMK 727

Query: 691  NLETLKLLNDTFPLSSSEAKLHRLPQWYKFPPNLKSITFSETLLDWRH 834
             LETLK   D    S++ +K+   P   KFPPNL+++T ++T+L W H
Sbjct: 728  YLETLKFYGDV--SSNARSKISHFPGHNKFPPNLRNLTITDTMLSWEH 773



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 27/54 (50%), Positives = 41/54 (75%)
 Frame = +2

Query: 986  QHWEPLDGGFRFLKVLQLDRTDLVQWDASAHHFPRLERVVLKHCERLEAIPSGL 1147
            ++W+P D GFR L+V  L RT+L +W+AS +HFP L++++LK C+RLE + S L
Sbjct: 796  EYWKPKDDGFRTLEVFYLGRTNLQKWEASNYHFPSLKKLILKFCDRLEGLSSSL 849


>gb|AET22504.1| hypothetical protein [Solanum lycopersicum]
            gi|356600308|gb|AET22505.1| hypothetical protein [Solanum
            pimpinellifolium]
          Length = 886

 Score =  138 bits (347), Expect = 3e-30
 Identities = 105/285 (36%), Positives = 155/285 (54%), Gaps = 9/285 (3%)
 Frame = +1

Query: 4    CLREGKEEKFLKVI---EHNFQDASGIPTYYRRLCIHSHVLNYVRSKPSNLRVRSFLCLA 174
            C  E K+EK L V+   E +F         +RRL  HS +  Y     SN  VRSFL  +
Sbjct: 491  CQEEAKQEKLLHVVRRLEPHFPQG-----VHRRLHFHSDIFAYSSYTYSNPYVRSFL--S 543

Query: 175  TEECELPREHTSFIHEAFKLVRVLDVRSICLYRFPNDIVQLVHLRYVAIFGNFKVLPQSI 354
            ++ C +  E + F    FKL+RVLDV +   Y FP  +++LVHLRY+A+  N + LP+SI
Sbjct: 544  SKACSV-LEDSYFGCMGFKLLRVLDVVNYSFYGFPIHVIKLVHLRYLALSINSE-LPRSI 601

Query: 355  CKLRNLQTLLVETTEREMDI-QVDIWKMLHFRHLHTSGSSRLHGPPPNTRKHNEDPFVRR 531
             KL++LQTL++    +EM I  +++WKM   RH+H  G   L G P +      +  V  
Sbjct: 602  SKLKSLQTLIIYWGTKEMRILPLELWKMPILRHIHVKGDVLLFGSPIDDHHSKRNFRVLE 661

Query: 532  SMQTIS--TISPDSCTENILARTPNLKKLGIRGKLITLTERKGE--SSMFDNIARLGNLE 699
            ++QT+   TIS  + +  ++A  PNLK L     L+T      +   S  +N+ ++ +LE
Sbjct: 662  NLQTLCTITISTINFSHRLIATLPNLKTLA--SNLVTGGNHDVDWLGSCLNNLHQMYSLE 719

Query: 700  TLKLLNDTFPLSSSEAKLHR-LPQWYKFPPNLKSITFSETLLDWR 831
            TLKLL   F L       H  + +W  FPPNLK++T S +LL W+
Sbjct: 720  TLKLL---FNLPMKNPLPHNSIQRWNAFPPNLKNLTLSCSLLLWQ 761


Top