BLASTX nr result

ID: Bupleurum21_contig00009193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009193
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16290.3| unnamed protein product [Vitis vinifera]              130   2e-28
ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 s...   127   2e-27
ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 s...   125   9e-27
ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 s...   125   9e-27
ref|XP_003597194.1| Protein transport protein Sec61 beta subunit...   120   2e-25

>emb|CBI16290.3| unnamed protein product [Vitis vinifera]
          Length = 699

 Score =  130 bits (327), Expect = 2e-28
 Identities = 68/113 (60%), Positives = 81/113 (71%)
 Frame = +1

Query: 103 IQTTTMARGXXXXXXXXATSNTRPGPVGIAPRGSAAATAGMRRRRIXXXXXXXXXXXXXX 282
           + +T+MARG         T+ +RPGPVG+APRG+AAATAGMRRRR+              
Sbjct: 588 LHSTSMARGSSQSQAS-TTATSRPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGG 646

Query: 283 XXXXXNMLRFYTDDSPGLKISPTVVLVMSVCFIGFVTALHVFGKLYRYKSAAG 441
                NMLRFYTDD+PGLKI+PTVVLVMS+CFIGFVTALHVFGK+YRYK+  G
Sbjct: 647 GSGS-NMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRYKAGGG 698


>ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis
           vinifera]
          Length = 107

 Score =  127 bits (318), Expect = 2e-27
 Identities = 67/108 (62%), Positives = 77/108 (71%)
 Frame = +1

Query: 118 MARGXXXXXXXXATSNTRPGPVGIAPRGSAAATAGMRRRRIXXXXXXXXXXXXXXXXXXX 297
           MARG         T+ +RPGPVG+APRG+AAATAGMRRRR+                   
Sbjct: 1   MARGSSQSQAS-TTATSRPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGS- 58

Query: 298 NMLRFYTDDSPGLKISPTVVLVMSVCFIGFVTALHVFGKLYRYKSAAG 441
           NMLRFYTDD+PGLKI+PTVVLVMS+CFIGFVTALHVFGK+YRYK+  G
Sbjct: 59  NMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRYKAGGG 106


>ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Glycine max]
          Length = 105

 Score =  125 bits (313), Expect = 9e-27
 Identities = 69/105 (65%), Positives = 75/105 (71%)
 Frame = +1

Query: 118 MARGXXXXXXXXATSNTRPGPVGIAPRGSAAATAGMRRRRIXXXXXXXXXXXXXXXXXXX 297
           MARG        +T+ TRPGP G+APRGSAAATAGMRRRR+                   
Sbjct: 1   MARGSSQSQSSTSTA-TRPGPAGMAPRGSAAATAGMRRRRLGGGNSSASTGVGGGSS--- 56

Query: 298 NMLRFYTDDSPGLKISPTVVLVMSVCFIGFVTALHVFGKLYRYKS 432
           NMLRFYTDD+PGLKISPTVVLVMS+CFIGFVTALHVFGKLYR KS
Sbjct: 57  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKS 101


>ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Glycine max]
          Length = 105

 Score =  125 bits (313), Expect = 9e-27
 Identities = 69/105 (65%), Positives = 75/105 (71%)
 Frame = +1

Query: 118 MARGXXXXXXXXATSNTRPGPVGIAPRGSAAATAGMRRRRIXXXXXXXXXXXXXXXXXXX 297
           MARG        +T+ TRPGP G+APRGSAAATAGMRRRR+                   
Sbjct: 1   MARGSSQSQSSTSTA-TRPGPAGMAPRGSAAATAGMRRRRLGGGNSSASTGVGGGSS--- 56

Query: 298 NMLRFYTDDSPGLKISPTVVLVMSVCFIGFVTALHVFGKLYRYKS 432
           NMLRFYTDD+PGLKISPTVVLVMS+CFIGFVTALHVFGKLYR KS
Sbjct: 57  NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKS 101


>ref|XP_003597194.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
           gi|87241202|gb|ABD33060.1| Sec61beta [Medicago
           truncatula] gi|355486242|gb|AES67445.1| Protein
           transport protein Sec61 beta subunit [Medicago
           truncatula]
          Length = 107

 Score =  120 bits (302), Expect = 2e-25
 Identities = 69/109 (63%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
 Frame = +1

Query: 118 MARGXXXXXXXXATSNTRPGPVGIA-PRGSAAATAGMRRRRIXXXXXXXXXXXXXXXXXX 294
           MA+G        +TS+ RPG  G+A PRGSAAATAGMRRRR+                  
Sbjct: 1   MAKGASQSQSSTSTSS-RPGGGGLAAPRGSAAATAGMRRRRLTSGNSTASVGGGSSGGS- 58

Query: 295 XNMLRFYTDDSPGLKISPTVVLVMSVCFIGFVTALHVFGKLYRYKSAAG 441
            NMLRFYTDD+PGLKISPTVVLVMS+CFIGFVTALHVFGKLYRYK+ AG
Sbjct: 59  -NMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYKAGAG 106


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