BLASTX nr result

ID: Bupleurum21_contig00009186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009186
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb...   324   8e-87
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...   266   3e-69
dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]                   263   3e-68
gb|ACC60969.1| phytochrome A [Vitis riparia]                          258   5e-67
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...   258   5e-67

>sp|P55141.1|PHYA_PETCR RecName: Full=Phytochrome A gi|556667|emb|CAA53165.1| phytochrome A
            [Petroselinum crispum]
          Length = 1129

 Score =  324 bits (831), Expect = 8e-87
 Identities = 160/213 (75%), Positives = 184/213 (86%)
 Frame = -3

Query: 646  ASKKIDGEGTVTGIFCFXXXXXXXXXXXLHIQHLTEQTAVKRLKTLAYIRRQTKNPLSGI 467
            ASKK+ GEGTVTGIFCF           LHIQ LTEQTA+KRLKTL+Y+RRQ KNPL GI
Sbjct: 859  ASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLKTLSYLRRQAKNPLCGI 918

Query: 466  DFIRGQLEGHDLGEEQSKLLRTSGHCQRQLNKILDDTDLNSIIDGYIDLEMSEFMLHDVY 287
            +F+R +LE   +GEEQ+KL RTS HCQR +NKILDDTDL+SIIDGY+DLEMSEF LHDVY
Sbjct: 919  NFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIIDGYLDLEMSEFRLHDVY 978

Query: 286  VASRSQVTMRSNEKSIQVVDNFSEESMSEILYGDSLRLQQIIADFLSICVNYTPVGGHIG 107
            VASRSQV+MRSN K+IQVVDNFSEE MSE LYGDSLRLQ+++ADF+S+CVN TPVGGH+G
Sbjct: 979  VASRSQVSMRSNGKAIQVVDNFSEEMMSETLYGDSLRLQKVLADFMSVCVNLTPVGGHLG 1038

Query: 106  ISVTLTKDNLGHSVQLVHMEFRITHAGAGIPED 8
            ISVTLT+DNLG SVQLVH+EFRITH GAG+PE+
Sbjct: 1039 ISVTLTEDNLGQSVQLVHLEFRITHTGAGVPEE 1071


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score =  266 bits (679), Expect = 3e-69
 Identities = 134/214 (62%), Positives = 164/214 (76%)
 Frame = -3

Query: 643  SKKIDGEGTVTGIFCFXXXXXXXXXXXLHIQHLTEQTAVKRLKTLAYIRRQTKNPLSGID 464
            SK++D EG VTG+FCF           LHIQ L+EQTA+KRLK LAYIRRQ +NPLSGI 
Sbjct: 855  SKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLKVLAYIRRQIRNPLSGII 914

Query: 463  FIRGQLEGHDLGEEQSKLLRTSGHCQRQLNKILDDTDLNSIIDGYIDLEMSEFMLHDVYV 284
            F R  LEG +LGEEQ  +LRTS  CQRQLNKILDDTDL+SIIDGY+DLEM EF LH+V V
Sbjct: 915  FSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIIDGYLDLEMLEFKLHEVLV 974

Query: 283  ASRSQVTMRSNEKSIQVVDNFSEESMSEILYGDSLRLQQIIADFLSICVNYTPVGGHIGI 104
            AS SQ+ M+SN K+I +V++  E+ ++E LYGDS RLQQ++A+FL +CVN TP GG + I
Sbjct: 975  ASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVLANFLLVCVNSTPSGGQLSI 1034

Query: 103  SVTLTKDNLGHSVQLVHMEFRITHAGAGIPEDLL 2
            S TLTKD +G SVQL  +E RI+H G G+PE+LL
Sbjct: 1035 SGTLTKDRIGESVQLALLEVRISHTGGGVPEELL 1068


>dbj|BAM36554.1| phytochrome A [Fragaria x ananassa]
          Length = 1124

 Score =  263 bits (671), Expect = 3e-68
 Identities = 130/214 (60%), Positives = 163/214 (76%)
 Frame = -3

Query: 643  SKKIDGEGTVTGIFCFXXXXXXXXXXXLHIQHLTEQTAVKRLKTLAYIRRQTKNPLSGID 464
            SKK+D EG VTG+FCF           LH+Q L+EQTAVKR K LAYI+RQ +NPLSGI 
Sbjct: 855  SKKLDSEGAVTGVFCFLQLASPELQQALHVQRLSEQTAVKRFKALAYIKRQIRNPLSGIL 914

Query: 463  FIRGQLEGHDLGEEQSKLLRTSGHCQRQLNKILDDTDLNSIIDGYIDLEMSEFMLHDVYV 284
            F R  +EG +LG EQ +L+ TS  CQ+QL+KILDD+DL+SIIDGY+DLEM EF L +V V
Sbjct: 915  FSRKMIEGTELGAEQKQLIHTSAQCQQQLSKILDDSDLDSIIDGYLDLEMVEFTLQEVLV 974

Query: 283  ASRSQVTMRSNEKSIQVVDNFSEESMSEILYGDSLRLQQIIADFLSICVNYTPVGGHIGI 104
            AS SQV ++SN KSI+ V + +EE M+E LYGDSLRLQQ++ADF+S+ VNY P GG + +
Sbjct: 975  ASISQVMIKSNAKSIRTVQDANEEIMTETLYGDSLRLQQVLADFISVSVNYMPPGGQLTL 1034

Query: 103  SVTLTKDNLGHSVQLVHMEFRITHAGAGIPEDLL 2
            +  LTKD LG SV L H+EFRI+HAG G+PE+LL
Sbjct: 1035 ATNLTKDQLGQSVHLAHLEFRISHAGGGVPEELL 1068


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score =  258 bits (660), Expect = 5e-67
 Identities = 132/214 (61%), Positives = 160/214 (74%)
 Frame = -3

Query: 643  SKKIDGEGTVTGIFCFXXXXXXXXXXXLHIQHLTEQTAVKRLKTLAYIRRQTKNPLSGID 464
            SKK+D EG VTG+FCF           LHIQ L+EQTA+KRLK LAYI+RQ KNPLSGI 
Sbjct: 854  SKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGII 913

Query: 463  FIRGQLEGHDLGEEQSKLLRTSGHCQRQLNKILDDTDLNSIIDGYIDLEMSEFMLHDVYV 284
            F R  +E  DLGEEQ ++L TS  CQRQL+KILDD DL+SII+GY+DLEM EF L +V V
Sbjct: 914  FSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLV 973

Query: 283  ASRSQVTMRSNEKSIQVVDNFSEESMSEILYGDSLRLQQIIADFLSICVNYTPVGGHIGI 104
            AS SQV ++SN K IQ+V++  E  M+E LYGD LRLQQ++ADFL I VN+TP GG + +
Sbjct: 974  ASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSV 1033

Query: 103  SVTLTKDNLGHSVQLVHMEFRITHAGAGIPEDLL 2
            + +L KD LG SV LVH+E RITHAG G+PE LL
Sbjct: 1034 AASLIKDRLGESVHLVHLELRITHAGNGVPEQLL 1067


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score =  258 bits (660), Expect = 5e-67
 Identities = 132/214 (61%), Positives = 160/214 (74%)
 Frame = -3

Query: 643  SKKIDGEGTVTGIFCFXXXXXXXXXXXLHIQHLTEQTAVKRLKTLAYIRRQTKNPLSGID 464
            SKK+D EG VTG+FCF           LHIQ L+EQTA+KRLK LAYI+RQ KNPLSGI 
Sbjct: 854  SKKLDREGAVTGVFCFLQLASQELQQALHIQRLSEQTALKRLKALAYIKRQIKNPLSGII 913

Query: 463  FIRGQLEGHDLGEEQSKLLRTSGHCQRQLNKILDDTDLNSIIDGYIDLEMSEFMLHDVYV 284
            F R  +E  DLGEEQ ++L TS  CQRQL+KILDD DL+SII+GY+DLEM EF L +V V
Sbjct: 914  FSRKMMEDTDLGEEQQQILHTSAQCQRQLSKILDDHDLDSIIEGYLDLEMVEFTLREVLV 973

Query: 283  ASRSQVTMRSNEKSIQVVDNFSEESMSEILYGDSLRLQQIIADFLSICVNYTPVGGHIGI 104
            AS SQV ++SN K IQ+V++  E  M+E LYGD LRLQQ++ADFL I VN+TP GG + +
Sbjct: 974  ASISQVMIKSNGKGIQIVNDAEEGIMTETLYGDGLRLQQVLADFLLISVNFTPGGGQLSV 1033

Query: 103  SVTLTKDNLGHSVQLVHMEFRITHAGAGIPEDLL 2
            + +L KD LG SV LVH+E RITHAG G+PE LL
Sbjct: 1034 AASLIKDRLGESVHLVHLELRITHAGNGVPEQLL 1067


Top