BLASTX nr result

ID: Bupleurum21_contig00009174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009174
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   167   1e-39
ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813...   166   3e-39
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261...   166   4e-39
emb|CBI28434.3| unnamed protein product [Vitis vinifera]              164   2e-38
ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu...   164   2e-38

>ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101203985 [Cucumis sativus]
          Length = 465

 Score =  167 bits (424), Expect = 1e-39
 Identities = 94/172 (54%), Positives = 100/172 (58%), Gaps = 1/172 (0%)
 Frame = -3

Query: 626 GAYADIPA-DTEKVKQXXXXXXXXXXXSRIYISNLPVDVTVDELRELFXXXXXXXXXXXX 450
           G Y   PA +  +VKQ           SRIY+SNLP DVT DELRELF            
Sbjct: 297 GGYGSTPAAEPAQVKQCDDNCDDSCDNSRIYVSNLPPDVTTDELRELFGGIGQIGRIKQK 356

Query: 449 XGYKDQWPWNIKIYEDGKGNCKGDACVVYEDPSAAHSAGGFYNNYDLRGNKISVGMAEKS 270
            GYKDQWPWNIKIY D  GN KGDACV YEDPSAAHSAGGFYNNYDLRG  I+V MAEKS
Sbjct: 357 RGYKDQWPWNIKIYTDEMGNNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKS 416

Query: 269 APRAAPQYTHXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDRNYYGGNRSRPY 114
           APRA P Y H                           GPDR+ +GGNRSRPY
Sbjct: 417 APRAPPAYNH---GGGGRGGYGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 465


>ref|XP_003518322.1| PREDICTED: uncharacterized protein LOC100813547 [Glycine max]
          Length = 404

 Score =  166 bits (420), Expect = 3e-39
 Identities = 96/173 (55%), Positives = 103/173 (59%), Gaps = 1/173 (0%)
 Frame = -3

Query: 629 GGAYADIPADTEKVKQXXXXXXXXXXXSRIYISNLPVDVTVDELRELFXXXXXXXXXXXX 450
           GGA A+ PA   KVKQ           SRIYISNLP DVT++ELRELF            
Sbjct: 240 GGAPAEPPA---KVKQCDENCGDSCDNSRIYISNLPPDVTIEELRELFGGIGQVGRIKQK 296

Query: 449 XGYKDQWPWNIKIYEDGKGNCKGDACVVYEDPSAAHSAGGFYNNYDLRGNKISVGMAEKS 270
            GYKDQWPWNIK+Y D KGN KGD C+VYEDPSAAHSAG FYNNYDLRG KI V MAEKS
Sbjct: 297 RGYKDQWPWNIKLYTDEKGNNKGDGCLVYEDPSAAHSAGSFYNNYDLRGYKIGVAMAEKS 356

Query: 269 APRAAPQYTHXXXXXXXXXXXXXXXXXXXXXXXXXXXGPD-RNYYGGNRSRPY 114
           AP+A P Y H                           GPD R+ YGGNRSRPY
Sbjct: 357 APKAPPAYNH-----GGNRSGYGGDRRRDNYRDGGSSGPDRRDNYGGNRSRPY 404


>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
          Length = 462

 Score =  166 bits (419), Expect = 4e-39
 Identities = 93/172 (54%), Positives = 103/172 (59%)
 Frame = -3

Query: 629 GGAYADIPADTEKVKQXXXXXXXXXXXSRIYISNLPVDVTVDELRELFXXXXXXXXXXXX 450
           GG+  + P    KVKQ           SRIYISNLP DVTVDELRELF            
Sbjct: 297 GGSTTEAPV---KVKQCDENCGDSCDNSRIYISNLPPDVTVDELRELFGGIGQVGRIKQK 353

Query: 449 XGYKDQWPWNIKIYEDGKGNCKGDACVVYEDPSAAHSAGGFYNNYDLRGNKISVGMAEKS 270
            GYKDQWPWNIKIY D  GN KGDAC+ YEDPSAAHSAGGFYNNY++RG KI+V MAEKS
Sbjct: 354 RGYKDQWPWNIKIYTDEGGNNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVAMAEKS 413

Query: 269 APRAAPQYTHXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDRNYYGGNRSRPY 114
           APRA P + H                           GPDR+++GGNRSRPY
Sbjct: 414 APRAPPAFGH---GGGGRGGYGGGDRRRDNYRDNAGSGPDRHHHGGNRSRPY 462


>emb|CBI28434.3| unnamed protein product [Vitis vinifera]
          Length = 873

 Score =  164 bits (414), Expect = 2e-38
 Identities = 90/160 (56%), Positives = 98/160 (61%)
 Frame = -3

Query: 593  KVKQXXXXXXXXXXXSRIYISNLPVDVTVDELRELFXXXXXXXXXXXXXGYKDQWPWNIK 414
            KVKQ           SRIYISNLP DVTVDELRELF             GYKDQWPWNIK
Sbjct: 717  KVKQCDENCGDSCDNSRIYISNLPPDVTVDELRELFGGIGQVGRIKQKRGYKDQWPWNIK 776

Query: 413  IYEDGKGNCKGDACVVYEDPSAAHSAGGFYNNYDLRGNKISVGMAEKSAPRAAPQYTHXX 234
            IY D  GN KGDAC+ YEDPSAAHSAGGFYNNY++RG KI+V MAEKSAPRA P + H  
Sbjct: 777  IYTDEGGNNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVAMAEKSAPRAPPAFGH-- 834

Query: 233  XXXXXXXXXXXXXXXXXXXXXXXXXGPDRNYYGGNRSRPY 114
                                     GPDR+++GGNRSRPY
Sbjct: 835  -GGGGRGGYGGGDRRRDNYRDNAGSGPDRHHHGGNRSRPY 873


>ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
           gi|223539602|gb|EEF41188.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 437

 Score =  164 bits (414), Expect = 2e-38
 Identities = 94/171 (54%), Positives = 102/171 (59%)
 Frame = -3

Query: 626 GAYADIPADTEKVKQXXXXXXXXXXXSRIYISNLPVDVTVDELRELFXXXXXXXXXXXXX 447
           GA AD PA   K+KQ           SRIYISNLP DVT DELRELF             
Sbjct: 276 GASADAPA---KIKQCDGNCDDTCDNSRIYISNLPPDVTTDELRELFGGIGQVGRIKQKR 332

Query: 446 GYKDQWPWNIKIYEDGKGNCKGDACVVYEDPSAAHSAGGFYNNYDLRGNKISVGMAEKSA 267
           GYKDQWPWNIK+Y D KGN KGDA + YEDPSAAHSAGGFYNNYD+RG KI+V MAEK+A
Sbjct: 333 GYKDQWPWNIKLYTDEKGNNKGDAVLSYEDPSAAHSAGGFYNNYDMRGYKINVAMAEKTA 392

Query: 266 PRAAPQYTHXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDRNYYGGNRSRPY 114
           PR  P Y H                           GPDR+Y+GGNRSRPY
Sbjct: 393 PR-QPSYDH-----GGGRGGYGGGDRRRENNRDGGSGPDRHYHGGNRSRPY 437


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