BLASTX nr result

ID: Bupleurum21_contig00009137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009137
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521816.1| radical sam protein, putative [Ricinus commu...   379   e-103
ref|XP_002268292.2| PREDICTED: CDK5 regulatory subunit-associate...   365   7e-99
emb|CBI18159.3| unnamed protein product [Vitis vinifera]              365   7e-99
ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA m...   349   7e-94
ref|XP_004162857.1| PREDICTED: threonylcarbamoyladenosine tRNA m...   345   1e-92

>ref|XP_002521816.1| radical sam protein, putative [Ricinus communis]
            gi|223539029|gb|EEF40626.1| radical sam protein, putative
            [Ricinus communis]
          Length = 630

 Score =  379 bits (974), Expect = e-103
 Identities = 203/332 (61%), Positives = 234/332 (70%)
 Frame = +1

Query: 1    LRIGMTNPPYILEHLKEIADVLCHPCVYTFLHVPVQSGSDAILSAMNREYTVSDFRTVVD 180
            LRIGMTNPP+ILEHLKEIA+VL HPCVY+FLHVPVQSGSD +L+AMNREYTVS+FRTVVD
Sbjct: 281  LRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDNVLNAMNREYTVSNFRTVVD 340

Query: 181  TLTELVPGMQIATDIICGFPGETDDDFAQTVSLINDYKFPQVHISQFYPRPGTPAARMKK 360
            TLTELVPGMQIATDIICGFPGETDDDFAQTVSLIN+YK PQVHISQFYPRPGTPAARMKK
Sbjct: 341  TLTELVPGMQIATDIICGFPGETDDDFAQTVSLINEYKLPQVHISQFYPRPGTPAARMKK 400

Query: 361  VPSTAVKKRSRELTSVFESFTPYNGMEGSIERIWITEIATDGRHLVGHTKGYVQVLVVGP 540
            VPS  VKKRSRELT+VFE+FTPYNGMEG +ERIWITEIATDG HLVGHTKGYVQVLV+ P
Sbjct: 401  VPSNIVKKRSRELTAVFEAFTPYNGMEGRVERIWITEIATDGIHLVGHTKGYVQVLVIAP 460

Query: 541  GSLLGTSAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDMSDKL 720
             ++LGTSAI                                           S +     
Sbjct: 461  ETMLGTSAI----------------VKITSVGRWSVFGEVIQTLNQTNRGVASAEKMPSG 504

Query: 721  EKCNSFSNQEESCACVGELDAPACACGHNSCGEQNIPEEKRGSLLKSDSWADDQNSLNIF 900
             K +  S+  E+CAC  E +  +CACG  SCG QN  EE   ++ ++D   +D+N  N+ 
Sbjct: 505  GKYSPCSDPCETCACSKEPE--SCACGPESCGGQNPLEE--SAIAQNDMLLEDRNRRNLI 560

Query: 901  GRLLRKRKNHRTKKIEDDTLMEHAMMQKNAAG 996
            G LLRKRKN   K +E++  +E    Q+   G
Sbjct: 561  GWLLRKRKNQTQKIVENNIALESIKKQEWTKG 592


>ref|XP_002268292.2| PREDICTED: CDK5 regulatory subunit-associated protein 1-like 1-like
            [Vitis vinifera]
          Length = 622

 Score =  365 bits (938), Expect = 7e-99
 Identities = 199/317 (62%), Positives = 224/317 (70%)
 Frame = +1

Query: 1    LRIGMTNPPYILEHLKEIADVLCHPCVYTFLHVPVQSGSDAILSAMNREYTVSDFRTVVD 180
            LRIGMTNPPYILEHLKE+A VL HPCVY+FLHVPVQSGSDAILSAMNREYTV++FRTVVD
Sbjct: 274  LRIGMTNPPYILEHLKEMAVVLRHPCVYSFLHVPVQSGSDAILSAMNREYTVTEFRTVVD 333

Query: 181  TLTELVPGMQIATDIICGFPGETDDDFAQTVSLINDYKFPQVHISQFYPRPGTPAARMKK 360
            TLTELVPGMQIATDIICGFPGETD++FAQTVSLI +Y+FPQVHISQFYPRPGTPAARMKK
Sbjct: 334  TLTELVPGMQIATDIICGFPGETDEEFAQTVSLIQEYRFPQVHISQFYPRPGTPAARMKK 393

Query: 361  VPSTAVKKRSRELTSVFESFTPYNGMEGSIERIWITEIATDGRHLVGHTKGYVQVLVVGP 540
            VPS  VKKRSRELTS+FE+FTPYNGMEG +ERIWI+EIATDG HLVGHTKGY+QVLVV P
Sbjct: 394  VPSAVVKKRSRELTSIFEAFTPYNGMEGRVERIWISEIATDGIHLVGHTKGYMQVLVVAP 453

Query: 541  GSLLGTSAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDMSDKL 720
             SL+GTSAI                                             +    L
Sbjct: 454  RSLMGTSAIVKITSVGRWSVFGELIETLNQVNDNISL----------------NEEKFSL 497

Query: 721  EKCNSFSNQEESCACVGELDAPACACGHNSCGEQNIPEEKRGSLLKSDSWADDQNSLNIF 900
             KC+  S   E CAC  E  A  CAC   SC  +   EE  GS+ + D   ++Q   N+F
Sbjct: 498  GKCSPCSVPGEICACSRE--AEPCACEPQSCEGKISMEE--GSVSRKDMLPENQ---NLF 550

Query: 901  GRLLRKRKNHRTKKIED 951
              LLR+RKNH  K+IE+
Sbjct: 551  KWLLRRRKNHGQKRIEN 567


>emb|CBI18159.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  365 bits (938), Expect = 7e-99
 Identities = 199/317 (62%), Positives = 224/317 (70%)
 Frame = +1

Query: 1    LRIGMTNPPYILEHLKEIADVLCHPCVYTFLHVPVQSGSDAILSAMNREYTVSDFRTVVD 180
            LRIGMTNPPYILEHLKE+A VL HPCVY+FLHVPVQSGSDAILSAMNREYTV++FRTVVD
Sbjct: 201  LRIGMTNPPYILEHLKEMAVVLRHPCVYSFLHVPVQSGSDAILSAMNREYTVTEFRTVVD 260

Query: 181  TLTELVPGMQIATDIICGFPGETDDDFAQTVSLINDYKFPQVHISQFYPRPGTPAARMKK 360
            TLTELVPGMQIATDIICGFPGETD++FAQTVSLI +Y+FPQVHISQFYPRPGTPAARMKK
Sbjct: 261  TLTELVPGMQIATDIICGFPGETDEEFAQTVSLIQEYRFPQVHISQFYPRPGTPAARMKK 320

Query: 361  VPSTAVKKRSRELTSVFESFTPYNGMEGSIERIWITEIATDGRHLVGHTKGYVQVLVVGP 540
            VPS  VKKRSRELTS+FE+FTPYNGMEG +ERIWI+EIATDG HLVGHTKGY+QVLVV P
Sbjct: 321  VPSAVVKKRSRELTSIFEAFTPYNGMEGRVERIWISEIATDGIHLVGHTKGYMQVLVVAP 380

Query: 541  GSLLGTSAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDMSDKL 720
             SL+GTSAI                                             +    L
Sbjct: 381  RSLMGTSAIVKITSVGRWSVFGELIETLNQVNDNISL----------------NEEKFSL 424

Query: 721  EKCNSFSNQEESCACVGELDAPACACGHNSCGEQNIPEEKRGSLLKSDSWADDQNSLNIF 900
             KC+  S   E CAC  E  A  CAC   SC  +   EE  GS+ + D   ++Q   N+F
Sbjct: 425  GKCSPCSVPGEICACSRE--AEPCACEPQSCEGKISMEE--GSVSRKDMLPENQ---NLF 477

Query: 901  GRLLRKRKNHRTKKIED 951
              LLR+RKNH  K+IE+
Sbjct: 478  KWLLRRRKNHGQKRIEN 494


>ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase-like
            [Cucumis sativus]
          Length = 635

 Score =  349 bits (895), Expect = 7e-94
 Identities = 188/318 (59%), Positives = 217/318 (68%), Gaps = 1/318 (0%)
 Frame = +1

Query: 1    LRIGMTNPPYILEHLKEIADVLCHPCVYTFLHVPVQSGSDAILSAMNREYTVSDFRTVVD 180
            LRIGMTNPP+ILEHLKEIA VL HPCVY+FLHVPVQSGSDAILSAMNREYTVS+FRTVVD
Sbjct: 283  LRIGMTNPPFILEHLKEIAKVLSHPCVYSFLHVPVQSGSDAILSAMNREYTVSEFRTVVD 342

Query: 181  TLTELVPGMQIATDIICGFPGETDDDFAQTVSLINDYKFPQVHISQFYPRPGTPAARMKK 360
            TLTELVPGMQIATDIICGFPGETD+DF +T++LI +Y  PQVHISQFYPRPGTPAARMKK
Sbjct: 343  TLTELVPGMQIATDIICGFPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKK 402

Query: 361  VPSTAVKKRSRELTSVFESFTPYNGMEGSIERIWITEIATDGRHLVGHTKGYVQVLVVGP 540
            VPS  VKKRSRELTSVFE+FTPYNGMEG +ERIWITEIA DG HLVGHTKGY+QVLV+ P
Sbjct: 403  VPSAIVKKRSRELTSVFEAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAP 462

Query: 541  GSLLGTSAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDMSDKL 720
             ++LGTSA                                                 DK+
Sbjct: 463  ETMLGTSATVKITSIGRWSVFGEVIEIISTKHHKTTTLEDTL-------------TQDKV 509

Query: 721  EKCNSFSNQEESCACVGELDAPACACGHNSC-GEQNIPEEKRGSLLKSDSWADDQNSLNI 897
              C   SN  E+CAC  E +  +CACG  SC G   + +E   S  ++    ++    N+
Sbjct: 510  SPC---SNTHETCACSTEPE--SCACGLESCKGAVAVGDEVNSS--RNVPSPEEPKRKNL 562

Query: 898  FGRLLRKRKNHRTKKIED 951
               +LR+RK+H   K E+
Sbjct: 563  IEWVLRRRKSHVLPKREE 580


>ref|XP_004162857.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase-like
            [Cucumis sativus]
          Length = 635

 Score =  345 bits (885), Expect = 1e-92
 Identities = 187/317 (58%), Positives = 213/317 (67%)
 Frame = +1

Query: 1    LRIGMTNPPYILEHLKEIADVLCHPCVYTFLHVPVQSGSDAILSAMNREYTVSDFRTVVD 180
            LRIGMTNPP+ILEHLKEIA VL HPCVY+FLHVPVQSGSDAILSAMNREYTVS+FRTVVD
Sbjct: 283  LRIGMTNPPFILEHLKEIAKVLSHPCVYSFLHVPVQSGSDAILSAMNREYTVSEFRTVVD 342

Query: 181  TLTELVPGMQIATDIICGFPGETDDDFAQTVSLINDYKFPQVHISQFYPRPGTPAARMKK 360
            TLTELVPGMQIATDIICGFPGETD+DF +T++LI +Y  PQVHISQFYPRPGTPAARMKK
Sbjct: 343  TLTELVPGMQIATDIICGFPGETDEDFCETINLIKEYNLPQVHISQFYPRPGTPAARMKK 402

Query: 361  VPSTAVKKRSRELTSVFESFTPYNGMEGSIERIWITEIATDGRHLVGHTKGYVQVLVVGP 540
            VPS  VKKRSRELTSVFE+FTPYNGMEG +ERIWITEIA DG HLVGHTKGY+QVLV+  
Sbjct: 403  VPSAIVKKRSRELTSVFEAFTPYNGMEGRVERIWITEIAADGIHLVGHTKGYIQVLVIAS 462

Query: 541  GSLLGTSAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDMSDKL 720
             ++LGTSA                                                 DK+
Sbjct: 463  ETMLGTSATVKITSIGRWSVFGEVIKIISTKHHKTTTLEDTL-------------TQDKV 509

Query: 721  EKCNSFSNQEESCACVGELDAPACACGHNSCGEQNIPEEKRGSLLKSDSWADDQNSLNIF 900
              C   SN  E+CAC  E +  +CACG  SC       +K  S     S  ++    N+ 
Sbjct: 510  SPC---SNTHETCACSTEPE--SCACGLESCKGAVAVGDKVNSSRNIPS-PEEPKRKNLI 563

Query: 901  GRLLRKRKNHRTKKIED 951
              +LR+RK+H   K E+
Sbjct: 564  EWVLRRRKSHVLPKREE 580


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