BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009135
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [...   409   e-112
ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago ...   405   e-110
ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative ...   404   e-110
ref|XP_002320845.1| predicted protein [Populus trichocarpa] gi|1...   402   e-109
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-l...   400   e-109

>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
           gi|147867252|emb|CAN81194.1| hypothetical protein
           VITISV_022853 [Vitis vinifera]
           gi|297745390|emb|CBI40470.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score =  409 bits (1051), Expect = e-112
 Identities = 209/240 (87%), Positives = 218/240 (90%)
 Frame = +1

Query: 37  MEFVSPEGLRLDGRRPMEMRQLRAEIGTVANADGSAIFEMGNTKVIAAVYGPREVQNRSQ 216
           MEFVSPEGLRLDGRRPMEMRQ+R EIG VA ADGSA FEMGNTKVIAAVYGPREV+NRSQ
Sbjct: 1   MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60

Query: 217 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACIMRHLMPRSQIDIF 396
           Q++DQALVRCEYTMANFST            STEISLVIRQTMEACI+ HLMPRSQIDIF
Sbjct: 61  QISDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 120

Query: 397 VQVLQADGGTRSACINAATLALADAGIPMCDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 576
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 577 VTVGILPKSGKVTLLQMDSKLPVDIFENVMQLATEGCKAVANYIREVLLENTKQLDLRRG 756
           VTVGILPK  KVTLLQMD+KLP+DIFENVMQLA EGCKA+ANYIREVLLENTKQL+ RRG
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPMDIFENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240


>ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago truncatula]
           gi|355501548|gb|AES82751.1| Exosome complex exonuclease
           RRP41 [Medicago truncatula]
          Length = 241

 Score =  405 bits (1040), Expect = e-110
 Identities = 205/240 (85%), Positives = 218/240 (90%)
 Frame = +1

Query: 37  MEFVSPEGLRLDGRRPMEMRQLRAEIGTVANADGSAIFEMGNTKVIAAVYGPREVQNRSQ 216
           ME+VSPEGLR DGRRPMEMRQ+RAEIG V+ ADGSAIFEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1   MEYVSPEGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 217 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACIMRHLMPRSQIDIF 396
           Q++D+ALVRCEY+MANFST            STEISLVIRQTME CI+ HLMPRSQIDI+
Sbjct: 61  QMSDKALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 397 VQVLQADGGTRSACINAATLALADAGIPMCDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 576
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 577 VTVGILPKSGKVTLLQMDSKLPVDIFENVMQLATEGCKAVANYIREVLLENTKQLDLRRG 756
           VTVGILPK  KVTLLQMDSKLP+DI ENVMQLATEGCKA+ANYIRE+LLENTKQL+ RRG
Sbjct: 181 VTVGILPKLDKVTLLQMDSKLPIDILENVMQLATEGCKAIANYIREILLENTKQLEYRRG 240


>ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
           gi|223529966|gb|EEF31893.1| Exosome complex exonuclease
           RRP41, putative [Ricinus communis]
          Length = 241

 Score =  404 bits (1039), Expect = e-110
 Identities = 205/240 (85%), Positives = 217/240 (90%)
 Frame = +1

Query: 37  MEFVSPEGLRLDGRRPMEMRQLRAEIGTVANADGSAIFEMGNTKVIAAVYGPREVQNRSQ 216
           ME+VSPEGLRLDGRRPMEMRQLRA+IG V+ ADGSA+FEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 217 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACIMRHLMPRSQIDIF 396
           Q+ DQALVRCEYTMANFST            STEISLVIRQTME CI+ HLMPRSQIDI+
Sbjct: 61  QIIDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 397 VQVLQADGGTRSACINAATLALADAGIPMCDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 576
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 577 VTVGILPKSGKVTLLQMDSKLPVDIFENVMQLATEGCKAVANYIREVLLENTKQLDLRRG 756
           VTVGILPK  KVTLLQMD+KLP+D FENVMQLA EGCKA+ANYIRE+LLENTKQL+ RRG
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREILLENTKQLEYRRG 240


>ref|XP_002320845.1| predicted protein [Populus trichocarpa] gi|118489833|gb|ABK96716.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222861618|gb|EEE99160.1| predicted protein [Populus
           trichocarpa]
          Length = 241

 Score =  402 bits (1032), Expect = e-109
 Identities = 204/240 (85%), Positives = 217/240 (90%)
 Frame = +1

Query: 37  MEFVSPEGLRLDGRRPMEMRQLRAEIGTVANADGSAIFEMGNTKVIAAVYGPREVQNRSQ 216
           MEFV+PEGLRLDGRRPMEMRQLRA+IG VA ADGSA+FEMGNTKVIAAVYGPREVQNRSQ
Sbjct: 1   MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 217 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACIMRHLMPRSQIDIF 396
           Q+NDQALVRCEY+MANFST            STEISLVIRQ ME CI+ +LMPRSQIDI+
Sbjct: 61  QINDQALVRCEYSMANFSTGDRRRKPKGDRRSTEISLVIRQAMEECILTNLMPRSQIDIY 120

Query: 397 VQVLQADGGTRSACINAATLALADAGIPMCDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 576
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAG+LNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLDLNYVEDSAGGPD 180

Query: 577 VTVGILPKSGKVTLLQMDSKLPVDIFENVMQLATEGCKAVANYIREVLLENTKQLDLRRG 756
           VTVGILPK  KVTLLQMD+KLP+D FENVMQLA EGCKA+ANYIREVLLENTKQL+ RRG
Sbjct: 181 VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREVLLENTKQLEYRRG 240


>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
          Length = 241

 Score =  400 bits (1028), Expect = e-109
 Identities = 203/240 (84%), Positives = 217/240 (90%)
 Frame = +1

Query: 37  MEFVSPEGLRLDGRRPMEMRQLRAEIGTVANADGSAIFEMGNTKVIAAVYGPREVQNRSQ 216
           ME+VSPEGLRLDGRRPMEMRQ+RAEIG V+ ADGSAIFEMGNTKVIAAVYGPREVQNR+Q
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60

Query: 217 QLNDQALVRCEYTMANFSTXXXXXXXXXXXXSTEISLVIRQTMEACIMRHLMPRSQIDIF 396
           Q++  ALVRCEY+MANFST            STEISLVIRQTMEACI+ HL+PRSQIDI+
Sbjct: 61  QISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120

Query: 397 VQVLQADGGTRSACINAATLALADAGIPMCDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 576
           VQVLQADGGTRSACINAATLALADAGIPM DLVTSCSAGYLNSTPLLDLNYVEDSAGGPD
Sbjct: 121 VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 577 VTVGILPKSGKVTLLQMDSKLPVDIFENVMQLATEGCKAVANYIREVLLENTKQLDLRRG 756
           VT+GILPK  KVTLLQMDSKLP+DI ENVMQLA EGCKA+ANYIREVLLENTKQL+ RRG
Sbjct: 181 VTLGILPKLDKVTLLQMDSKLPIDILENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240