BLASTX nr result

ID: Bupleurum21_contig00009130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009130
         (1338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283264.1| PREDICTED: protein FIZZY-RELATED 3 [Vitis vi...   623   e-176
ref|NP_196888.2| protein FIZZY-related 3 [Arabidopsis thaliana] ...   615   e-174
ref|XP_002531570.1| WD-repeat protein, putative [Ricinus communi...   614   e-173
ref|XP_002873630.1| WD-40 repeat family protein [Arabidopsis lyr...   611   e-172
ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|2...   608   e-171

>ref|XP_002283264.1| PREDICTED: protein FIZZY-RELATED 3 [Vitis vinifera]
            gi|296086214|emb|CBI31655.3| unnamed protein product
            [Vitis vinifera]
          Length = 471

 Score =  623 bits (1607), Expect = e-176
 Identities = 296/337 (87%), Positives = 313/337 (92%)
 Frame = -2

Query: 1337 SSESLTPTKPLRKVPKTPHKVLDAPGLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASTS 1158
            SSE+ TP KP RKVPKTPHKVLDAP LQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASTS
Sbjct: 135  SSEASTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASTS 194

Query: 1157 KVTKLCDLGPNVGVCSVQWTKEGSYISIGTSVGQVQVWDGTQCKRVRTLSGHQTRTGVLA 978
            KVTKLCDLGP+  VCSVQWT+EGSYISIGT +GQVQVWDGTQCK+VRT+SGHQTRTGVLA
Sbjct: 195  KVTKLCDLGPSDSVCSVQWTREGSYISIGTHLGQVQVWDGTQCKKVRTMSGHQTRTGVLA 254

Query: 977  WSSHILSSGSRDRNILQHDIRVSNDYISKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 798
            WSS ILSSGSRDRNILQHD+RVSND++SKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV
Sbjct: 255  WSSRILSSGSRDRNILQHDLRVSNDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 314

Query: 797  WNQHSQNPLLKLTEHTAAVKAITWSPHXXXXXXXXXGTADRCIRFWNTTSGNQLNSIDTG 618
            WNQHSQ P+LKLTEHTAAVKAI WSPH         GTADRCIRFW+TT+GNQLN +DTG
Sbjct: 315  WNQHSQQPVLKLTEHTAAVKAIAWSPHQSGLLASGGGTADRCIRFWSTTNGNQLNHVDTG 374

Query: 617  SQVCNLEWSKNVNEIVSTHGYSQNQIMVWKYPSMSKVATLTGHSLRVLYLATSPDGQTIV 438
            SQVCNL WSKNVNE+VSTHGYSQNQIMVWKYPSM+KVATLTGHSLRVLYLA SPDGQTIV
Sbjct: 375  SQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSMTKVATLTGHSLRVLYLAMSPDGQTIV 434

Query: 437  TGAGDETLRFWNVFPSMKTPAPVKDMGLWSMGRTSIR 327
            TGAGDETLRFWN+FPSMKTPAPVKD G+WSMGRT IR
Sbjct: 435  TGAGDETLRFWNIFPSMKTPAPVKDTGVWSMGRTHIR 471


>ref|NP_196888.2| protein FIZZY-related 3 [Arabidopsis thaliana]
            gi|334187668|ref|NP_001190305.1| protein FIZZY-related 3
            [Arabidopsis thaliana] gi|75330295|sp|Q8LPL5.1|FZR3_ARATH
            RecName: Full=Protein FIZZY-RELATED 3; AltName: Full=Cell
            cycle switch protein CCS52B gi|20466231|gb|AAM20433.1|
            cell cycle switch protein [Arabidopsis thaliana]
            gi|25084105|gb|AAN72176.1| cell cycle switch protein
            [Arabidopsis thaliana] gi|332004565|gb|AED91948.1|
            protein FIZZY-related 3 [Arabidopsis thaliana]
            gi|332004566|gb|AED91949.1| protein FIZZY-related 3
            [Arabidopsis thaliana]
          Length = 481

 Score =  615 bits (1586), Expect = e-174
 Identities = 294/337 (87%), Positives = 308/337 (91%)
 Frame = -2

Query: 1337 SSESLTPTKPLRKVPKTPHKVLDAPGLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASTS 1158
            SS+S  P KP RKVPKTPHKVLDAP LQDDFYLN+VDWSSQNVLAVGLGTCVYLWTAS S
Sbjct: 145  SSDSSPPPKPPRKVPKTPHKVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNS 204

Query: 1157 KVTKLCDLGPNVGVCSVQWTKEGSYISIGTSVGQVQVWDGTQCKRVRTLSGHQTRTGVLA 978
            KVTKLCDLGPN  VCSVQWT+EGSYISIGTS GQVQVWDGTQCKRVRT+ GHQTRTGVLA
Sbjct: 205  KVTKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLA 264

Query: 977  WSSHILSSGSRDRNILQHDIRVSNDYISKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 798
            W+S ILSSGSRDRNILQHDIRV +D++SKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV
Sbjct: 265  WNSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 324

Query: 797  WNQHSQNPLLKLTEHTAAVKAITWSPHXXXXXXXXXGTADRCIRFWNTTSGNQLNSIDTG 618
            WN HSQ P+LKLTEHTAAVKAITWSPH         GTADRCIRFWNTT+GNQLNSIDTG
Sbjct: 325  WNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTG 384

Query: 617  SQVCNLEWSKNVNEIVSTHGYSQNQIMVWKYPSMSKVATLTGHSLRVLYLATSPDGQTIV 438
            SQVCNL WSKNVNEIVSTHGYSQNQIM+WKYPSMSKVATLTGHS+RVLYLATSPDGQTIV
Sbjct: 385  SQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIV 444

Query: 437  TGAGDETLRFWNVFPSMKTPAPVKDMGLWSMGRTSIR 327
            TGAGDETLRFWNVFPS+K   PVKD GLWS+GRT IR
Sbjct: 445  TGAGDETLRFWNVFPSVKMQTPVKDTGLWSLGRTQIR 481


>ref|XP_002531570.1| WD-repeat protein, putative [Ricinus communis]
            gi|223528800|gb|EEF30806.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 493

 Score =  614 bits (1584), Expect = e-173
 Identities = 292/337 (86%), Positives = 309/337 (91%)
 Frame = -2

Query: 1337 SSESLTPTKPLRKVPKTPHKVLDAPGLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASTS 1158
            SSE  TP KP RKVPKTPHKVLDAP LQDDFYLNLVDWSSQNVLAVGLGTCVYLWTAS S
Sbjct: 157  SSEVSTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASNS 216

Query: 1157 KVTKLCDLGPNVGVCSVQWTKEGSYISIGTSVGQVQVWDGTQCKRVRTLSGHQTRTGVLA 978
            KVTKLCDLGP+  VCSVQWT+EGSYISIGT +GQVQVWDGTQCKRVRT+ GHQTRTGVLA
Sbjct: 217  KVTKLCDLGPHDSVCSVQWTREGSYISIGTGLGQVQVWDGTQCKRVRTMGGHQTRTGVLA 276

Query: 977  WSSHILSSGSRDRNILQHDIRVSNDYISKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 798
            W+S ILSSGSRDRNILQHD+RVS+D++SKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV
Sbjct: 277  WNSRILSSGSRDRNILQHDLRVSSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 336

Query: 797  WNQHSQNPLLKLTEHTAAVKAITWSPHXXXXXXXXXGTADRCIRFWNTTSGNQLNSIDTG 618
            WNQHSQ P+LKLTEHTAAVKAI WSPH         GTADRCIRFWNTT+G+QLN +DTG
Sbjct: 337  WNQHSQQPVLKLTEHTAAVKAIAWSPHQSSLLASGGGTADRCIRFWNTTNGHQLNHVDTG 396

Query: 617  SQVCNLEWSKNVNEIVSTHGYSQNQIMVWKYPSMSKVATLTGHSLRVLYLATSPDGQTIV 438
            SQVCNL WSKNVNE+VSTHGYSQNQIMVWKYPS++KVATLTGHSLRVLYLA SPDGQTIV
Sbjct: 397  SQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLAKVATLTGHSLRVLYLAMSPDGQTIV 456

Query: 437  TGAGDETLRFWNVFPSMKTPAPVKDMGLWSMGRTSIR 327
            TGAGDETLRFWNVFPSMK PAPVKD GLWS+GRT IR
Sbjct: 457  TGAGDETLRFWNVFPSMKAPAPVKDTGLWSLGRTHIR 493


>ref|XP_002873630.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319467|gb|EFH49889.1| WD-40 repeat family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 481

 Score =  611 bits (1575), Expect = e-172
 Identities = 292/337 (86%), Positives = 307/337 (91%)
 Frame = -2

Query: 1337 SSESLTPTKPLRKVPKTPHKVLDAPGLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASTS 1158
            SS+S  P KP RKVPKTPHKVLDAP LQDDFYLN+VDWSSQNVLAVGLGTCVYLWTAS S
Sbjct: 145  SSDSSPPPKPPRKVPKTPHKVLDAPSLQDDFYLNVVDWSSQNVLAVGLGTCVYLWTASNS 204

Query: 1157 KVTKLCDLGPNVGVCSVQWTKEGSYISIGTSVGQVQVWDGTQCKRVRTLSGHQTRTGVLA 978
            KV+KLCDLGPN  VCSVQWT+EGSYISIGTS GQVQVWDG QCKRVRT+ GHQTRTGVLA
Sbjct: 205  KVSKLCDLGPNDSVCSVQWTREGSYISIGTSHGQVQVWDGIQCKRVRTMGGHQTRTGVLA 264

Query: 977  WSSHILSSGSRDRNILQHDIRVSNDYISKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 798
            W+S ILSSGSRDRNILQHDIRV +DY+SKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV
Sbjct: 265  WNSRILSSGSRDRNILQHDIRVQSDYVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 324

Query: 797  WNQHSQNPLLKLTEHTAAVKAITWSPHXXXXXXXXXGTADRCIRFWNTTSGNQLNSIDTG 618
            WN HSQ P+LKLTEHTAAVKAITWSPH         GTADRCIRFWNTT+G+QLNSIDTG
Sbjct: 325  WNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGHQLNSIDTG 384

Query: 617  SQVCNLEWSKNVNEIVSTHGYSQNQIMVWKYPSMSKVATLTGHSLRVLYLATSPDGQTIV 438
            SQVCNL WSKNVNEIVSTHGYSQNQIM+WKYPSMSKVATLTGHS+RVLYLATSPDGQTIV
Sbjct: 385  SQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIV 444

Query: 437  TGAGDETLRFWNVFPSMKTPAPVKDMGLWSMGRTSIR 327
            TGAGDETLRFWNVFPS+K   PVKD GLWS+GRT IR
Sbjct: 445  TGAGDETLRFWNVFPSVKMQTPVKDTGLWSLGRTQIR 481


>ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|222851924|gb|EEE89471.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  608 bits (1568), Expect = e-171
 Identities = 287/337 (85%), Positives = 307/337 (91%)
 Frame = -2

Query: 1337 SSESLTPTKPLRKVPKTPHKVLDAPGLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASTS 1158
            SSES TP KP RKVPKTPHKVLDAP LQDDFYLNLVDWSSQNVLAVGLGTCVYLWTAS S
Sbjct: 149  SSESSTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWTASNS 208

Query: 1157 KVTKLCDLGPNVGVCSVQWTKEGSYISIGTSVGQVQVWDGTQCKRVRTLSGHQTRTGVLA 978
            KVT+LCDLGPN  VCSVQWT+EGSYIS+GT +GQVQVWDGTQCKRVRT+ GHQTRTGVLA
Sbjct: 209  KVTRLCDLGPNDSVCSVQWTREGSYISVGTHLGQVQVWDGTQCKRVRTMGGHQTRTGVLA 268

Query: 977  WSSHILSSGSRDRNILQHDIRVSNDYISKLVGHKSEVCGLKWSHDDRELASGGNDNQLLV 798
            W+S  L+SGSRDR+ILQHD+R+S+DY+SKL+GHKSEVCGLKWSHDDRELASGGNDNQLLV
Sbjct: 269  WNSRTLASGSRDRHILQHDLRISSDYVSKLIGHKSEVCGLKWSHDDRELASGGNDNQLLV 328

Query: 797  WNQHSQNPLLKLTEHTAAVKAITWSPHXXXXXXXXXGTADRCIRFWNTTSGNQLNSIDTG 618
            WNQHSQ P+LKLTEHTAAVKAI WSPH         GTADRCIRFWNTT+G+QLN +DTG
Sbjct: 329  WNQHSQLPILKLTEHTAAVKAIAWSPHQSGLLASGGGTADRCIRFWNTTNGHQLNYVDTG 388

Query: 617  SQVCNLEWSKNVNEIVSTHGYSQNQIMVWKYPSMSKVATLTGHSLRVLYLATSPDGQTIV 438
            SQVCNL WSKNVNE+VSTHGYSQNQIMVWKYPS+SKVATL GHSLRVLYLA SPDGQTIV
Sbjct: 389  SQVCNLAWSKNVNELVSTHGYSQNQIMVWKYPSLSKVATLVGHSLRVLYLAMSPDGQTIV 448

Query: 437  TGAGDETLRFWNVFPSMKTPAPVKDMGLWSMGRTSIR 327
            TGAGDETLRFWNVFPSMKT  PVKD GLWS+GRT IR
Sbjct: 449  TGAGDETLRFWNVFPSMKTQTPVKDTGLWSLGRTQIR 485


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