BLASTX nr result

ID: Bupleurum21_contig00009123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00009123
         (4314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1895   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1785   0.0  
ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|2...  1724   0.0  
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...  1707   0.0  
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...  1701   0.0  

>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score = 1895 bits (4910), Expect = 0.0
 Identities = 978/1392 (70%), Positives = 1126/1392 (80%), Gaps = 11/1392 (0%)
 Frame = -1

Query: 4185 ESIQFTKELYIEDVGPRRIKSIKFSTFSEADIIKLAEVQVXXXXXXXXXXKPVEGGLLDP 4006
            + IQFTKE YIEDVGPR+I+SI+F+ FSE++I K AEVQV          KP+E GLLDP
Sbjct: 3    DGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDP 62

Query: 4005 RMGPPSKFGFCATCHNSFRDCPGHYGCLILALPVYNVGYLSTIVDLLKCICKDCASILLP 3826
            RMGP +K G CATC  +FRDCPGH G L LALPVYNVGYLSTIVD+LKCICK C+ +LL 
Sbjct: 63   RMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLD 122

Query: 3825 EKECTDILKNIRKD-IDPSKKTQLFKRIVKRCTAMASSKKAVKCSNCGYINGMVKRGV-- 3655
            EK   D LK +R   ++  KK +L K+IV++CTAMASSKKAVKCS CGY+NG+VK+ V  
Sbjct: 123  EKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSV 182

Query: 3654 LGVIHDRSKIMDNAKHDSQSALSHIKESMG-FNSSSVINPDRVLSLFKKMQDRDFDLLYL 3478
            LG+IHDRSKI D +  +  SA+SH KES   F+   ++NP +VLSLFK+M D D DLL L
Sbjct: 183  LGIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNL 242

Query: 3477 SDRPENFLITSIAVPPIPIRPSVFVDGGQMSNENDISERLKRIIQMNAILHQNLTTASYA 3298
            ++RPE  ++T+I VPPI IRPSVF+DGG  SNEND++ERLKRIIQ NA LHQ L      
Sbjct: 243  AERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGST 302

Query: 3297 PKALELWPVLQSEVAQYINSDVPGVQTSIPD-KHLSGFVQRLKGKQGRFRGNLSGKRVEY 3121
             K L  W  LQ EVAQYINSDV GV  ++   + LSGFVQRLKGKQGRFRGNLSGKRVEY
Sbjct: 303  SKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362

Query: 3120 TGRTVISPDPNLKITEVAIPILMAQILTYPERVSSHNIEKLRQCVRNGSNKYPGAKFIRQ 2941
            TGRTVISPDPNLKITEVAIPILMA+IL+YPERVS HNIEKLRQC+ NG  KYPGAK IR 
Sbjct: 363  TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422

Query: 2940 ADGTNMALQFSSRKRLAEELKFGQIVERHLEDGDIILFNRQPSLHRMSIMCHRAKIMPWR 2761
             DG+  +L FS RKR A+ELK+G IVERHLEDGD++LFNRQPSLHRMSIMCHRA+IMPWR
Sbjct: 423  PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482

Query: 2760 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 2581
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 483  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542

Query: 2580 FLTSSFLITRKDTFYDRASFSLMCCYMGDAMDHIDLPTPALIKPIELWTGKQLFNVLLRP 2401
            FLTSSFLITRKDTFYDRA+FSLMC YMGD MD +DLPTPA+IKP+ELWTGKQLFNVLLRP
Sbjct: 543  FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRP 602

Query: 2400 HATMRVYLTLTVKEKGYN---GGETMCPNDRFVYFRNSELVSGQLGKATLGNGNKDGMYS 2230
            HA +RVYL LTV EK YN   G ETMCP+D FVYFRNSEL+SGQLGKATLGNGNKDG++S
Sbjct: 603  HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662

Query: 2229 ILLRDYKVHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPGDLLNKDKEGKISDGNVQCD 2050
            +LLRDY  HAA+ CMNRLAKLSARWIGNHGFSIGIDDVQPG LLN  K  +I +G   C 
Sbjct: 663  VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722

Query: 2049 ELISKYNYGKIELLPGLDAAQTLEARITKVLNEIRGEAAELCMKSLHWRNSPLIMSQCGS 1870
            ELI +YN GK++L PG +AAQTLEA IT VLN+IR   A +CM+ LHWRNSPLIMSQCGS
Sbjct: 723  ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782

Query: 1869 KGSPINISQMVACVGQQSVGGARAPNGFLDRTLPHFLKNSRIPAAKGFVGNSFYSGLTAT 1690
            KGSPINISQM+ACVGQQSVGG RAP+GF+DRTLPHF + S+ P AKGFV +SFY+GLTAT
Sbjct: 783  KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842

Query: 1689 EFFFHTMGGREGLVDTAVKTADTGYISRRLMKSLEDLSVQYDNTVRNASACIVQFTYGDD 1510
            EFFFHTMGGREGLVDTAVKTADTGY+SRRLMK+LEDLS+QYD TVRNA+  IVQF YGDD
Sbjct: 843  EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902

Query: 1509 GMDPSQMEEKDGRPLNFHRLLLKVKAACPPEENNFLSSSEILEVVDERLSEHVMTPQGGC 1330
            GMDP++ME KDG PLNF+RL LKVKA CP  EN  LS+ +I E V +RL EH  T   GC
Sbjct: 903  GMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEH-NTSAEGC 960

Query: 1329 TKQFNEKLSECLKECAERLENTRRGLKLEGEPHRGDDFNIMEIVANNISGITHRQLKVFM 1150
            +  F   LS  L+EC E+ +NTR  L L GE    ++ +I E  A NISGIT +QL+VF+
Sbjct: 961  SDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFL 1020

Query: 1149 ETCISRYHQKVVECGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTQGVPRXXXXXX 970
            +TCISRY  K +E GTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT GVPR      
Sbjct: 1021 DTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN 1080

Query: 969  XXXXXNTPVITARLKTGDSLEEARIVQGRIEKTVLGQVAKSIKIVMASRLASVAVTLDMD 790
                 +TP+ITA L+  ++++ AR+V+GRIE+T LGQVAKSIKIV+ SRLA +AV LDM+
Sbjct: 1081 GAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDME 1140

Query: 789  IIQASKLCINAHTVKEAILRTPKIKLKEQHIHVLDARKLEVIPPSDRSKLHFELHRLKHK 610
             IQAS+L I+++ V+E+ILR  +IKLK+QHI VLDA KLEV P  DRS +HFELH LK+ 
Sbjct: 1141 GIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNL 1200

Query: 609  LPTVVVRGIDSIKRAVLKECDVEKGKESDVEKGGYMMLIEGTGLEAVMGTEGVDGKNTVS 430
            LPTVVV+GI++++RAV+        K++ V+   Y +L+EGTGL+ VMGTEGV G+ T S
Sbjct: 1201 LPTVVVKGIETVERAVI-------NKDNKVK---YNLLVEGTGLQTVMGTEGVIGRETTS 1250

Query: 429  NHIMEVHKTLGIEAARLCIIDAIADTMKE--MSIDRRHMMLLADLMTFKGEVLGITRHGI 256
            NHI+EV +TLGIEAAR CII+ I  TM    MSID RHMMLLADLMTF+GEVLGITR GI
Sbjct: 1251 NHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGI 1310

Query: 255  QKMKDSVLMLASFEKTSDHLFNASVNGRVDNIEGVSECIIMGIPMQLGTGMLKVMQRVPE 76
            QKM  SVLMLASFEKT+DHLFNASV+GR D IEGVSECIIMGIPMQLGTG+LKV QR+ +
Sbjct: 1311 QKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQ 1370

Query: 75   V-ELKCGSDSIL 43
            V EL  G D I+
Sbjct: 1371 VPELSYGLDPII 1382


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score = 1785 bits (4622), Expect = 0.0
 Identities = 915/1397 (65%), Positives = 1096/1397 (78%), Gaps = 23/1397 (1%)
 Frame = -1

Query: 4203 MMRRADESIQFTKELYIEDVGPRRIKSIKFSTFSEADIIKLAEVQVXXXXXXXXXXKPVE 4024
            M R   E + FTK+ YIEDVGPR+IKS++F+TFS A+I KLAEVQV          KP++
Sbjct: 1    MNRAQVEGLVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPID 60

Query: 4023 GGLLDPRMGPPSKFGFCATCHNSFRDCPGHYGCLILALPVYNVGYLSTIVDLLKCICKDC 3844
            GGLLDPRMGP +K   CATCH +F DCPGHYG + LALPV+NVGY +TI+++LKCICK C
Sbjct: 61   GGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSC 120

Query: 3843 ASILLPEKECTDILKNIRKD-IDPSKKTQLFKRIVKRCTAMASSKKAVKCSNCGYINGMV 3667
            + ILL EK   D L+ +R   ++  +K  L K+I+K+C+ + +  K+ +CS CGY+NG V
Sbjct: 121  SRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSV 180

Query: 3666 KRGV--LGVIHDRSKIMDNAKHDSQSALSHIKESMGFNSSSVINPDRVLSLFKKMQDRDF 3493
            K+ V  LG++H R++  D         +S    +    S+ ++NP RVL LF++M D D 
Sbjct: 181  KKAVSMLGILHYRARSKD------AGVVSEDLRAPYNVSNDILNPFRVLCLFQRMSDEDC 234

Query: 3492 DLLYLSDRPENFLITSIAVPPIPIRPSVFVDGGQMSNENDISERLKRIIQMNAILHQNLT 3313
            +LL+LS+RPE  +IT++ VPPI IRPSV +DG Q SNENDI+ERLKRIIQ NA + Q L+
Sbjct: 235  ELLFLSNRPEKLIITNVLVPPIAIRPSVIMDGSQ-SNENDITERLKRIIQQNASVSQELS 293

Query: 3312 TASYAPKALELWPVLQSEVAQYINSDVPGVQTSIP-DKHLSGFVQRLKGKQGRFRGNLSG 3136
            T++   K LE W +LQSEVAQ INSDV G+  S+   K L+GFVQRLKGKQGRFRGNL G
Sbjct: 294  TSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCG 353

Query: 3135 KRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSSHNIEKLRQCVRNGSNKYPGA 2956
            KRVE+TGRTVISPDPNLKITEVA+PI MA+ILTYPERV+ HNIEKLRQCV NG +KYPGA
Sbjct: 354  KRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGA 413

Query: 2955 KFIRQADGTNMALQFSSRKRLAEELKFGQIVERHLEDGDIILFNRQPSLHRMSIMCHRAK 2776
            + +R  DG+  +L  S RKRLA+ELK+G+IVERHLEDGD++LFNRQPSLHRMSIMCHR +
Sbjct: 414  RMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVR 473

Query: 2775 IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILV 2596
            +MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILV
Sbjct: 474  VMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILV 533

Query: 2595 ASTQDFLTSSFLITRKDTFYDRASFSLMCCYMGDAMDHIDLPTPALIKPIELWTGKQLFN 2416
            ASTQDFLTSSFLITRKDTFYDRA+FSLMC YMGD MD +DLPTPAL+KPIELWTGKQLF+
Sbjct: 534  ASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFS 593

Query: 2415 VLLRPHATMRVYLTLTVKEKGYNG-------GETMCPNDRFVYFRNSELVSGQLGKATLG 2257
            VL+RPHA+M+VYL LTVKEK Y+         ETMCPND FVYFRNSEL+SGQ+GKATLG
Sbjct: 594  VLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLG 653

Query: 2256 NGNKDGMYSILLRDYKVHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPGDLLNKDKEGK 2077
            NGNKDG+YS+LLRDYK HAA+VCMNRLAKLSARWIGNHGFSIGIDDVQPGD L K K+  
Sbjct: 654  NGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTT 713

Query: 2076 ISDGNVQCDELISKYNYGKIELLPGLDAAQTLEARITKVLNEIRGEAAELCMKSLHWRNS 1897
            I +G   CD+ I+ +N G +    G DAAQ+LE++IT++LN IR   A +CM++LHWRNS
Sbjct: 714  ILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNS 773

Query: 1896 PLIMSQCGSKGSPINISQMVACVGQQSVGGARAPNGFLDRTLPHFLKNSRIPAAKGFVGN 1717
            PLIMSQCGSKGSPINISQMVACVGQQSVGG RAP+GF+DR+LPHF + ++ PAAKGFV N
Sbjct: 774  PLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVAN 833

Query: 1716 SFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYISRRLMKSLEDLSVQYDNTVRNASAC 1537
            SFYSGLTATEFFFHTMGGREGLVDTAVKTADTGY+SRRL+K+LEDLS+ YD++VRNA  C
Sbjct: 834  SFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGC 893

Query: 1536 IVQFTYGDDGMDPSQMEEKDGRPLNFHRLLLKVKAACPPEENNFLSSSEILEVVDERLSE 1357
            IVQF YGDDGMDP+QME K G PLNF RL LK KA CP + N  LS SE  E V++RLS+
Sbjct: 894  IVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSETVEDRLSK 953

Query: 1356 HVMTPQGGCTKQFNEKLSECLKECAERLENTRRGLKLEGE---------PHRGDDFNIME 1204
               +P+ GC+  F   L   L +  E  + +   L  + E             D+  I  
Sbjct: 954  DDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNIVIRN 1013

Query: 1203 IVANNISGITHRQLKVFMETCISRYHQKVVECGTAIGAIGAHSIGEPGTQMTLKTFHFAG 1024
             V  NI+G+THRQL+VF++TC+SRYH K +E GTAIGAIGA SIGEPGTQMTLKTFHFAG
Sbjct: 1014 KVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAG 1073

Query: 1023 VASMNVTQGVPRXXXXXXXXXXXNTPVITARLKTGDSLEEARIVQGRIEKTVLGQVAKSI 844
            VASMNVT GVPR           +TP++TA L   D++  AR+V+ RIEKT LGQ+AK I
Sbjct: 1074 VASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCI 1133

Query: 843  KIVMASRLASVAVTLDMDIIQASKLCINAHTVKEAILRTPKIKLKEQHIHVLDARKLEVI 664
            +IVM+SR A + + LDM+ I+ ++L ++A+ VK+AIL TPK+KLK +HI+VLD RKL V+
Sbjct: 1134 QIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVL 1193

Query: 663  P-PSDRSKLHFELHRLKHKLPTVVVRGIDSIKRAVLKECDVEKGKESDVEKGGYMMLIEG 487
            P  +DR+KLHF LH LK+ LP VVV+GI ++ RAV+KE   EK K  + +K  + +L+EG
Sbjct: 1194 PQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKE---EKDKARNAKK--FSLLVEG 1248

Query: 486  TGLEAVMGTEGVDGKNTVSNHIMEVHKTLGIEAARLCIIDAIADTMKE--MSIDRRHMML 313
            TGL+AVMGTEGVDG NT SNHI+EV + LGIEAAR CII+ I  TM+   MSID RHMML
Sbjct: 1249 TGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMML 1308

Query: 312  LADLMTFKGEVLGITRHGIQKMKDSVLMLASFEKTSDHLFNASVNGRVDNIEGVSECIIM 133
            L DLMTF+GEVLGITR GIQKM  SVLMLASFEKT+DHLFNASVNGR D IEGVSEC+IM
Sbjct: 1309 LGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIM 1368

Query: 132  GIPMQLGTGMLKVMQRV 82
            GIPM LGTGMLKV QRV
Sbjct: 1369 GIPMPLGTGMLKVRQRV 1385


>ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1|
            predicted protein [Populus trichocarpa]
          Length = 1394

 Score = 1724 bits (4466), Expect = 0.0
 Identities = 907/1401 (64%), Positives = 1080/1401 (77%), Gaps = 29/1401 (2%)
 Frame = -1

Query: 4200 MRRADESIQFTKELYIEDVGPRRIKSIKFSTFSEADIIKLAEVQVXXXXXXXXXXKPVEG 4021
            M++  + I +TK+ YIEDVGPRRIKSI+FST S +DI+K +E QV          K + G
Sbjct: 1    MQQRAQDIIYTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVG 60

Query: 4020 GLLDPRMGPPSKFGFCATCHNSFRDCPGHYGCLILALPVYNVGYLSTIVDLLKCICKDCA 3841
            GLLD RMG P+K G C TC  SF DCPGH+G L L LPVYNVGYLSTI+D+LKCICK C+
Sbjct: 61   GLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCS 120

Query: 3840 SILLPEKECTDILKNIRKD-IDPSKKTQLFKRIVKRCTAMASSKKAVKCSNCGYINGMVK 3664
             +L+ EK     LK +R    +P KK +L K IVK+C++MASSK AVKC  CGY+NGMVK
Sbjct: 121  RVLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSK-AVKCLRCGYMNGMVK 179

Query: 3663 RG--VLGVIHDRSKIMDNAKHDSQSALSHIKES---MGFNSSSVINPDRVLSLFKKMQDR 3499
            +   V+G+IHDRSK++D    + +SA+ H +E+   +G  ++ ++NP RVLSLF++M + 
Sbjct: 180  KAGSVVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGL-ATYILNPVRVLSLFQRMVEE 238

Query: 3498 DFDLLYLSDRPENFLITSIAVPPIPIRPSVFVDGGQMSNENDISERLKRIIQMNAILHQN 3319
            D +LLYL  RPE  +IT+IAVPPI IRPSVF +G Q SNENDI+ERLK+IIQ NA L   
Sbjct: 239  DCELLYLQGRPEKLIITTIAVPPISIRPSVFTEGSQ-SNENDITERLKQIIQFNAKLRLE 297

Query: 3318 LTTASYAP-KALELWPVLQSEVAQYINSDVPGVQTSIPDKHLSGFVQRLKGKQGRFRGNL 3142
            L        K L  W  LQ+ V  YINSDV         + LSGFVQRL GKQGRFR NL
Sbjct: 298  LLEGRRTGIKYLIGWDELQAVVTLYINSDVRIPLDMQVGRPLSGFVQRLTGKQGRFRQNL 357

Query: 3141 SGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSSHNIEKLRQCVRNGSNKYP 2962
            +GKRVE+TGRTVISPDPNLKITEVAIPI MA+ILTYPERV+ HNIEKLRQCV NGS KYP
Sbjct: 358  AGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYP 417

Query: 2961 GAKFIRQADGTNMALQFSSRKRLAEELKFGQIVERHLEDGDIILFNRQPSLHRMSIMCHR 2782
            GA+ +   DG++  L  + RKR+AEELK G IV RHLEDGD++LFNRQPSLHRMSIMCHR
Sbjct: 418  GARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHR 477

Query: 2781 AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 2602
            A+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNGEI
Sbjct: 478  ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEI 537

Query: 2601 LVASTQDFLTSSFLITRKDTFYDRASFSLMCCYMGDAMDHIDLPTPALIKPIELWTGKQL 2422
            LVASTQDFLTSSFLITRKDTFYDRA+FSLMC YM D MD +DLPTP+++KPIELWTGKQL
Sbjct: 538  LVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQL 597

Query: 2421 FNVLLRPHATMRVYLTLTVKEKGYNGG--------ETMCPNDRFVYFRNSELVSGQLGKA 2266
            F+VLLRPHA +RVY+ L +KEK Y+          ETMCPND +VYFRNSEL+SGQLGKA
Sbjct: 598  FSVLLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKA 657

Query: 2265 TLGNGNKDGMYSILLRDYKVHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPGDLLNKDK 2086
            TLGNGNKDG+YSILLRDY  +AA+ CMNRLAKLSARWIGNHGFSIGIDDVQPG  L  +K
Sbjct: 658  TLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEK 717

Query: 2085 EGKISDGNVQCDELISKYNYGKIELLPGLDAAQTLEARITKVLNEIRGEAAELCMKSLHW 1906
               IS+G   C++LI+ YN G++ L  G DA QTLE  IT+ LN++R EA ++CMK LHW
Sbjct: 718  GKTISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHW 777

Query: 1905 RNSPLIMSQCGSKGSPINISQMVACVGQQSVGGARAPNGFLDRTLPHFLKNSRIPAAKGF 1726
            RNSPLIMSQCGSKGSPINISQM+ACVGQQSVGG+RAP+GF+DR+LPHF + S+ PAAKGF
Sbjct: 778  RNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGF 837

Query: 1725 VGNSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYISRRLMKSLEDLSVQYDNTVRNA 1546
            V NSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGY++RRL K LEDL VQYDNTV++A
Sbjct: 838  VANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDA 897

Query: 1545 SACIVQFTYGDDGMDPSQMEEKDGRPLNFHRLLLKVKAACPPEENNFLSSSEILEVVDER 1366
               IVQF YGDDG+DP+ ME K G PLNF RL +KVKA C  EE+ +LS S+I  +V   
Sbjct: 898  GGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIVQSL 957

Query: 1365 LSEHVMTPQGGCTKQFNEKLSECLKECAERLENTRR---GLKLEG-------EPHRGDDF 1216
            L +H  T  G C++ F + LS  L + A+RLE   +   G+++E        E   G   
Sbjct: 958  LLKHNGTLDGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFENIKNVEGLTGISK 1017

Query: 1215 NIMEIVANNISGITHRQLKVFMETCISRYHQKVVECGTAIGAIGAHSIGEPGTQMTLKTF 1036
            N  E +A  +SGIT +QL+VF++TC+ RY  K +E GTAIGAIGA SIGEPGTQMTLKTF
Sbjct: 1018 N-TEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTF 1076

Query: 1035 HFAGVASMNVTQGVPRXXXXXXXXXXXNTPVITARLKTGDSLEEARIVQGRIEKTVLGQV 856
            HFAGVASMN+TQGVPR           +TP+IT  L+   ++  ARI++GRI+KTVLGQV
Sbjct: 1077 HFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQV 1136

Query: 855  AKSIKIVMASRLASVAVTLDMDIIQASKLCINAHTVKEAILRTPKIKLKEQHIHVLDARK 676
            AKSIKIVM SR ASV VTLDM  I+ ++L ++A+ V+E IL TPKIK K Q I+VL+  K
Sbjct: 1137 AKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDGK 1196

Query: 675  LEVIPPSDRSKLHFELHRLKHKLPTVVVRGIDSIKRAVLKECDVEKGKESDVEKGG--YM 502
            LEV P  DR+KLHFELH LK+ LP VVV+GI +++R V+ +   +K  +++ ++GG  Y 
Sbjct: 1197 LEVFPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQ---KKLDDAENDQGGPKYN 1253

Query: 501  MLIEGTGLEAVMGTEGVDGKNTVSNHIMEVHKTLGIEAARLCIIDAIADTMKE--MSIDR 328
            M +EG GL+AVMGTEGVDG+ T SNHI+EV +TLGIEAAR CIID I  TM+   MSID 
Sbjct: 1254 MFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSIDI 1313

Query: 327  RHMMLLADLMTFKGEVLGITRHGIQKMKDSVLMLASFEKTSDHLFNASVNGRVDNIEGVS 148
            RHMMLLAD+MT +G VLGITR GIQKM  SVLMLASFEKTSDHLFNASV G+ D IEGVS
Sbjct: 1314 RHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIEGVS 1373

Query: 147  ECIIMGIPMQLGTGMLKVMQR 85
            ECIIMGIP+ +GTG+LK+ QR
Sbjct: 1374 ECIIMGIPVAIGTGVLKIQQR 1394


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score = 1707 bits (4422), Expect = 0.0
 Identities = 883/1401 (63%), Positives = 1072/1401 (76%), Gaps = 15/1401 (1%)
 Frame = -1

Query: 4200 MRRADESIQFTKELYIEDVGPRRIKSIKFSTFSEADIIKLAEVQVXXXXXXXXXXKPVEG 4021
            M R +E ++ TKE +IEDVG RRIKSI+FS FS  ++ + AEVQV          KPV  
Sbjct: 1    MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60

Query: 4020 GLLDPRMGPPSKFGFCATCHNSFRDCPGHYGCLILALPVYNVGYLSTIVDLLKCICKDCA 3841
            GLLD RMG  +K G C+TCH SF +CPGH+G L LALPV+NVG+ + I+D+LKCICK C+
Sbjct: 61   GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 3840 SILLPEKECTDILKNIRKD-IDPSKKTQLFKRIVKRCTAMASSKKAVKCSNCGYINGMVK 3664
             +LL EK+  + LK +R    DP +K+ + K++  +C       K  +C  CG+ING+ K
Sbjct: 121  RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC-------KLSRCPWCGFINGVAK 173

Query: 3663 RGVLGVI--HDRSKIMDNAKHDSQSALSHIKESMGFNSSSVINPDRVLSLFKKMQDRDFD 3490
            +G  G+I  HD SK +D +  + + ALSH KE +  ++  +++P  VLSLFK+M D D +
Sbjct: 174  KGRAGLIILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLSLFKRMTDEDCE 233

Query: 3489 LLYLSDRPENFLITSIAVPPIPIRPSVFVDGGQMSNENDISERLKRIIQMNAILHQNLTT 3310
            LL L DRPE  ++T IAVPP+PIRPSVFV GG+MSNE+ I+  LK I   N+IL +NL T
Sbjct: 234  LLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQT 293

Query: 3309 ASYAPKALELWPVLQSEVAQYINSDVPGVQTSIPDKHLSGFVQRLKGKQGRFRGNLSGKR 3130
                 K  + W  LQ +V +YINSD P    S+P+    G VQRLKGK GRFRGNLSGKR
Sbjct: 294  GGQFMKCFDCWQHLQLQVVEYINSDAP----SLPESQHRGLVQRLKGKTGRFRGNLSGKR 349

Query: 3129 VEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSSHNIEKLRQCVRNGSNKYPGAKF 2950
             EYTGRTVISPDPNL+ITEVAIPILMA++LTYPERVS +NIEKLRQC+RNG +K+PGA F
Sbjct: 350  TEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANF 409

Query: 2949 IRQADGTNMALQFSSRKRLAEELKFGQIVERHLEDGDIILFNRQPSLHRMSIMCHRAKIM 2770
            I Q DGT + L++  R+  A +LK+G +VERHLEDGDI+LFNRQPSLHRMSIM HRA+IM
Sbjct: 410  IIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIM 469

Query: 2769 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 2590
            PWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS
Sbjct: 470  PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529

Query: 2589 TQDFLTSSFLITRKDTFYDRASFSLMCCYMGDAMDHIDLPTPALIKPIELWTGKQLFNVL 2410
            TQDFLTSSFL+TRKD FYDR+SFSL+C Y+GDAM++IDLPTPALIKPIELWTGKQLF+VL
Sbjct: 530  TQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVL 589

Query: 2409 LRPHATMRVYLTLTVKEKGYNGG-------ETMCPNDRFVYFRNSELVSGQLGKATLGNG 2251
            +RP+A  +V+L LTVKEK Y          E MCPND FVYFRNSEL+SGQ+GKATLGNG
Sbjct: 590  VRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNG 649

Query: 2250 NKDGMYSILLRDYKVHAASVCMNRLAKLSARWIGNHGFSIGIDDVQPGDLLNKDKEGKIS 2071
            NKDGM+S L+RDY  HAA+ CMNRLAK SAR+IGNHGFSIG+DDVQPG+ LN++K+ KI 
Sbjct: 650  NKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKID 709

Query: 2070 DGNVQCDELISKYNYGKIELLPGLDAAQTLEARITKVLNEIRGEAAELCMKSLHWRNSPL 1891
             G   C +LI+ Y+ G + L PG +AAQTLE  IT+VLNEIR EA ++CM +LHWRNSPL
Sbjct: 710  GGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPL 769

Query: 1890 IMSQCGSKGSPINISQMVACVGQQSVGGARAPNGFLDRTLPHFLKNSRIPAAKGFVGNSF 1711
            IMSQCGSKGSPINISQMVACVGQQSVGG RAPNGF+DRTLPHF  NS+ PAAKGFV NSF
Sbjct: 770  IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSF 829

Query: 1710 YSGLTATEFFFHTMGGREGLVDTAVKTADTGYISRRLMKSLEDLSVQYDNTVRNASACIV 1531
            Y+GLTATEFFFHTMGGREGLVDTAVKTA+TGY+SRRLMK LEDLSV YD TVRNAS  IV
Sbjct: 830  YTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIV 889

Query: 1530 QFTYGDDGMDPSQMEEKDGRPLNFHRLLLKVKAACPPEENNFLSSSEILEVVDERLSEHV 1351
            QF YGDDGMDP++ME KDG+PLN  +L +KV A CP    N LS  EIL++++++LSEH 
Sbjct: 890  QFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHD 949

Query: 1350 MTPQGGCTKQFNEKLSECLKECAERLENTRRGLKLEGEPHRGD-DFNIMEIVANNISGIT 1174
             +   GC+++F + L+  L++  + L++TRR L L+ E H G+   +  E +A NISGI+
Sbjct: 950  ASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLD-EDHVGERHSSFEESIAANISGIS 1008

Query: 1173 HRQLKVFMETCISRYHQKVVECGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTQGV 994
             +QL+VF++TC+SRYH K +E G +IGAIGA SIGEPGTQMTLKTFHFAGVASMNVT GV
Sbjct: 1009 VKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGV 1068

Query: 993  PRXXXXXXXXXXXNTPVITARLKTGDSLEEARIVQGRIEKTVLGQVAKSIKIVMASRLAS 814
            PR           +TP+ITA L +   +  ARIV+G +EK VLG+VA++IKIV+ S   +
Sbjct: 1069 PRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPN 1128

Query: 813  VAVTLDMDIIQASKLCINAHTVKEAILRTPKIKLKEQHIHVLDARKLEVIPPS-DRSKLH 637
            + V LDM  I+A  + I+A +V+ +IL  PKIKLK +H+ V+D  KL + P   D+SKL 
Sbjct: 1129 LVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLL 1188

Query: 636  FELHRLKHKLPTVVVRGIDSIKRAVLKECDVEKGKESDVEKGGYMMLIEGTGLEAVMGTE 457
            +ELH LK  LP V+V+GI +++RAV+ E   E  K        Y +L+EGT L AVMGT 
Sbjct: 1189 YELHHLKSMLPKVIVKGIPTVERAVISETGEENDKR-------YKLLVEGTNLLAVMGTP 1241

Query: 456  GVDGKNTVSNHIMEVHKTLGIEAARLCIIDAIADTMKE--MSIDRRHMMLLADLMTFKGE 283
            GVD   T SNHIMEV++TLGIEAAR  IID I  TMK   M+ID RHMMLLADLMT+KGE
Sbjct: 1242 GVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGE 1301

Query: 282  VLGITRHGIQKMKDSVLMLASFEKTSDHLFNASVNGRVDNIEGVSECIIMGIPMQLGTGM 103
            +LGITR+GI KMK SVLMLASFEKT++HLFNAS +GR D IEGVSECIIMGIPMQLGTG+
Sbjct: 1302 ILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGI 1361

Query: 102  LKVMQRVPEV-ELKCGSDSIL 43
            LKV QR+  + E K   D IL
Sbjct: 1362 LKVRQRLDHLPEFKYQPDPIL 1382


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score = 1701 bits (4406), Expect = 0.0
 Identities = 905/1384 (65%), Positives = 1065/1384 (76%), Gaps = 30/1384 (2%)
 Frame = -1

Query: 4104 SEADIIKLAEVQVXXXXXXXXXXKPVEGGLLDPRMGPPSK-FGFCATCHNSFRDCPGHYG 3928
            S A+I+K AE QV          KP++ GLLDPR+GP +K    C TC   F +CPGH+G
Sbjct: 3    SGAEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHFG 62

Query: 3927 CLILALPVYNVGYLSTIVDLLKCICKDCASILLPEKECTDILKNIRKD-IDPSKKTQLFK 3751
             L L LPV+NVGY+S I+D+LKCICK C+ IL  EK C   LK +R   I+  +K++L K
Sbjct: 63   YLNLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELVK 122

Query: 3750 RIVKRCTAMASSKKAVKCSNCGYINGMVKRG--VLGVIHDRSKIMDNAKHDSQSALSHIK 3577
            +IVK+C++M S+K AVKC+ CG +NGMVK+   VL +IHDR+K++D    + +SA++H K
Sbjct: 123  KIVKKCSSMTSNK-AVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTK 181

Query: 3576 ESMGFNSSS--VINPDRVLSLFKKMQDRDFDLLYLSDRPENFLITSIAVPPIPIRPSVFV 3403
            ES    S +  ++ P +VLSLFK++ + D ++L L DRPE  +IT+IAVPPI IRPSVF 
Sbjct: 182  ESRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFT 241

Query: 3402 DGGQMSNENDISERLKRIIQMNAILHQNLTTASYAP-KALELWPVLQSEVAQYINSDVPG 3226
            DG Q SNENDI+ERLK+IIQ NA L   L     +  K L+ W  LQ+ VA Y+NSDV  
Sbjct: 242  DGLQ-SNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVRV 300

Query: 3225 VQTSIPDKHLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQ 3046
                   K LSGFVQRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI MA+
Sbjct: 301  PNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMAR 360

Query: 3045 ILTYPERVSSHNIEKLRQCVRNGSNKYPGAKFIRQADGTNMALQFSSRKRLAEELKFGQI 2866
            IL+YPERVS HNIEKLRQ V NG  KYPGA  +R  DG++  L  S RK +AEEL FG I
Sbjct: 361  ILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCI 420

Query: 2865 VERHLEDGDIILFNRQPSLHRMSIMCHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHV 2686
            V+RHLEDGD++LFNRQPSLHRMSIMCHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHV
Sbjct: 421  VDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHV 480

Query: 2685 PQTEEARTEALMLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFSLMC 2509
            PQTEEARTEAL+LMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDRA+FSLMC
Sbjct: 481  PQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMC 540

Query: 2508 CYMGDAMDHIDLPTPALIKPIELWTGKQLFNVLLRPHATMRVYLTLTVKEKGYNGG---- 2341
             YM D MD IDLPTPA++KPIELWTGKQLF+VLLRP+A +RVY+ L V+EK Y+      
Sbjct: 541  SYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGD 600

Query: 2340 ----ETMCPNDRFVYFRNSELVSGQLGKATLGNGNKDGMYSILLRDYKVHAASVCMNRLA 2173
                ETMCPND FVY RNSEL+SGQLGKATLGNGNKDG+YSILLRDY  HAA+ CMNRLA
Sbjct: 601  KREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLA 660

Query: 2172 KLS--ARWIGNHGFSIGIDDVQPGDLLNKDKEGKISDGNVQCDELISKYNYGKIELLPGL 1999
            KL   ARWIGNHGFSIGIDDVQPG  L   K   IS+G  QCD+LI +YN GK+ L PG 
Sbjct: 661  KLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGC 720

Query: 1998 DAAQTLEARITKVLNEIRGEAAELCMKSLHWRNSPLIMSQCGSKGSPINISQMVACVGQQ 1819
            DA QTLE+ IT+ LN++R EA ++CMK LHWRNSPLIMSQCGSKGS INISQMVACVGQQ
Sbjct: 721  DATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQ 780

Query: 1818 SVGGARAPNGFLDRTLPHFLKNSRIPAAKGFVGNSFYSGLTATEFFFHTMGGREGLVDTA 1639
            SVGG RAP+GF+DR+LPHF + S+ PAAKGFV NSFYSGL ATEFFFHTM GREGLVDTA
Sbjct: 781  SVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTA 840

Query: 1638 VKTADTGYISRRLMKSLEDLSVQYDNTVRNASACIVQFTYGDDGMDPSQMEEKDGRPLNF 1459
            VKTADTGY+SRRL+K LEDLS+QYDNTVRNAS CIVQF YGDDG+DP+ ME K G PLN 
Sbjct: 841  VKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNL 900

Query: 1458 HRLLLKVKAACPPEENNFLSSSEILEVVDERLSEHVMTPQGGCTKQFNEKLSECLKECAE 1279
             RL  KVKA CP  E ++LS  +I +VV+  L +H M   G C++ F + L+  L   A+
Sbjct: 901  DRLFSKVKATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAK 960

Query: 1278 RLENTRRGLKLEGEPH---------RGDDFNIMEIVANNISGITHRQLKVFMETCISRYH 1126
            RLE+  +      +P          RG+   I+E +A+ I G++ RQ++VF++TCI+RY 
Sbjct: 961  RLESMMKLADGVEDPTSENIQTGGIRGNS-KIIERLAHKIFGVSERQIEVFVKTCINRYL 1019

Query: 1125 QKVVECGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTQGVPRXXXXXXXXXXXNTP 946
             K VE GTAIGAIGA SIGEPGTQMTLKTFHFAGVASMN+TQGVPR           +TP
Sbjct: 1020 WKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTP 1079

Query: 945  VITARLKTGDSLEEARIVQGRIEKTVLGQVAKSIKIVMASRLASVAVTLDMDIIQASKLC 766
            +ITA L+   ++  ARI +GRI+KTVLGQVAKSIKIVM SR ASV +TLDM  IQ ++L 
Sbjct: 1080 IITAELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLS 1139

Query: 765  INAHTVKEAILRTPKIKLKEQHIHVLDARKLEVIPPSDRSKLHFELHRLKHKLPTVVVRG 586
            ++A+ VKEAILRTP+IKLK QHI VLD RKLEVIP  DR ++HFELH LK+ LP+++V+G
Sbjct: 1140 LDANIVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQG 1199

Query: 585  IDSIKRAVLKECDVEKGKESDVEKGGYMMLIEGTGLEAVMGTEGVDGKNTVSNHIMEVHK 406
            I +++RAV+ +     GK +D E   Y ML+EG GL+ VMGTEGVDG  T SNH+MEV K
Sbjct: 1200 IKTVERAVIAQ-KKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQK 1258

Query: 405  TLGIEAARLCIIDAIADTMKE--MSIDRRHMMLLADLMTFKGEVLGITRHGIQKMKDSVL 232
             LGIEAAR CIID I  TM+   MSID RHMMLL DLMTFKGEVLGITR GIQKM  SVL
Sbjct: 1259 FLGIEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVL 1318

Query: 231  MLASFEKTSDHLFNASVNGRVDNIEGVSECIIMGIPMQLGTGMLKVMQRV-PEVELKCGS 55
            MLASFEKT+DHL++A+V GR D IEGVSECIIMGIPMQ+GTG+LKV QRV P   L  GS
Sbjct: 1319 MLASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGS 1378

Query: 54   DSIL 43
            DSI+
Sbjct: 1379 DSII 1382


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